RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 CCDC142Q17RM4 750 aa20.15■□□□□ 0.82
TMEM53-202ENST00000372237 ACCSLQ4AC99 568 aa20.15■□□□□ 0.82
TMEM53-202ENST00000372237 NIF3L1Q9GZT8 377 aa20.15■□□□□ 0.82
TMEM53-202ENST00000372237 EBF2Q9HAK2 575 aa20.15■□□□□ 0.82
TMEM53-202ENST00000372237 FZD1Q9UP38 647 aa20.15■□□□□ 0.82
TMEM53-202ENST00000372237 RFC5P40937 340 aa20.14■□□□□ 0.82
TMEM53-202ENST00000372237 PPP1R15BQ5SWA1 713 aa20.14■□□□□ 0.82
TMEM53-202ENST00000372237 ANGEL2Q5VTE6 544 aaKnown RBP20.14■□□□□ 0.82
TMEM53-202ENST00000372237 PRAMEF18Q5VWM3 479 aa20.14■□□□□ 0.82
TMEM53-202ENST00000372237 C12orf42Q96LP6 360 aa20.14■□□□□ 0.82
TMEM53-202ENST00000372237 ADAM33Q9BZ11 813 aa20.14■□□□□ 0.82
TMEM53-202ENST00000372237 PPCSQ9HAB8 311 aa20.14■□□□□ 0.82
TMEM53-202ENST00000372237 ETNK1Q9HBU6 452 aa20.14■□□□□ 0.82
TMEM53-202ENST00000372237 SLCO1B3Q9NPD5 702 aa20.14■□□□□ 0.82
TMEM53-202ENST00000372237 PSMC3IPQ9P2W1 217 aaPredicted RBP20.14■□□□□ 0.82
TMEM53-202ENST00000372237 LOC102724159A0A0B4J2E5 919 aa20.14■□□□□ 0.81
TMEM53-202ENST00000372237 A8MUI8 341 aa20.14■□□□□ 0.81
TMEM53-202ENST00000372237 EIF4BP23588 611 aaKnown RBP20.14■□□□□ 0.81
TMEM53-202ENST00000372237 ICAM3P32942 547 aa20.14■□□□□ 0.81
TMEM53-202ENST00000372237 DYNLT1P63172 113 aa20.14■□□□□ 0.81
TMEM53-202ENST00000372237 TRPC3Q13507 836 aa20.14■□□□□ 0.81
TMEM53-202ENST00000372237 PWP2Q15269 919 aaKnown RBP20.14■□□□□ 0.81
TMEM53-202ENST00000372237 PDK4Q16654 411 aa20.14■□□□□ 0.81
TMEM53-202ENST00000372237 HIF1AQ16665 826 aa20.14■□□□□ 0.81
TMEM53-202ENST00000372237 SGSM1Q2NKQ1 1148 aa20.14■□□□□ 0.81
TMEM53-202ENST00000372237 ZPBP2Q6X784 338 aa20.14■□□□□ 0.81
TMEM53-202ENST00000372237 ANKMY2Q8IV38 441 aa20.14■□□□□ 0.81
TMEM53-202ENST00000372237 WDTC1Q8N5D0 677 aa20.14■□□□□ 0.81
TMEM53-202ENST00000372237 NIPA2Q8N8Q9 360 aa20.14■□□□□ 0.81
TMEM53-202ENST00000372237 LRRC8CQ8TDW0 803 aa20.14■□□□□ 0.81
TMEM53-202ENST00000372237 MYLK2Q9H1R3 596 aa20.14■□□□□ 0.81
TMEM53-202ENST00000372237 TXLNGQ9NUQ3 528 aa20.14■□□□□ 0.81
TMEM53-202ENST00000372237 SLC24A2Q9UI40 661 aa20.14■□□□□ 0.81
TMEM53-202ENST00000372237 USH1CQ9Y6N9 552 aa20.14■□□□□ 0.81
TMEM53-202ENST00000372237 BANF1O75531 89 aa20.13■□□□□ 0.81
TMEM53-202ENST00000372237 RPSAP08865 295 aaKnown RBP20.13■□□□□ 0.81
TMEM53-202ENST00000372237 WEE2P0C1S8 567 aa20.13■□□□□ 0.81
TMEM53-202ENST00000372237 YARSP54577 528 aaKnown RBP20.13■□□□□ 0.81
TMEM53-202ENST00000372237 FSTL1Q12841 308 aa20.13■□□□□ 0.81
TMEM53-202ENST00000372237 MYO1EQ12965 1108 aa20.13■□□□□ 0.81
TMEM53-202ENST00000372237 SCARA5Q6ZMJ2 495 aa20.13■□□□□ 0.81
TMEM53-202ENST00000372237 CATSPERGQ6ZRH7 1159 aa20.13■□□□□ 0.81
TMEM53-202ENST00000372237 RGS9BPQ6ZS82 235 aa20.13■□□□□ 0.81
TMEM53-202ENST00000372237 PCGF5Q86SE9 256 aa20.13■□□□□ 0.81
TMEM53-202ENST00000372237 VSIG1Q86XK7 387 aa20.13■□□□□ 0.81
TMEM53-202ENST00000372237 SLC35B2Q8TB61 432 aa20.13■□□□□ 0.81
TMEM53-202ENST00000372237 ERP27Q96DN0 273 aa20.13■□□□□ 0.81
TMEM53-202ENST00000372237 NRBP2Q9NSY0 501 aa20.13■□□□□ 0.81
TMEM53-202ENST00000372237 SAE1Q9UBE0 346 aaPredicted RBP20.13■□□□□ 0.81
TMEM53-202ENST00000372237 GRID1Q9ULK0 1009 aa20.13■□□□□ 0.81
TMEM53-202ENST00000372237 A0A1W2PPM1 405 aa20.13■□□□□ 0.81
TMEM53-202ENST00000372237 C19orf81C9J6K1 198 aa20.13■□□□□ 0.81
TMEM53-202ENST00000372237 TOM1L1O75674 476 aa20.13■□□□□ 0.81
TMEM53-202ENST00000372237 ANP32DO95626 131 aa20.13■□□□□ 0.81
TMEM53-202ENST00000372237 CCND1P24385 295 aa20.13■□□□□ 0.81
TMEM53-202ENST00000372237 PSMA2P25787 234 aa20.13■□□□□ 0.81
TMEM53-202ENST00000372237 GBP2P32456 591 aaPredicted RBP20.13■□□□□ 0.81
TMEM53-202ENST00000372237 LACTBP83111 547 aaPredicted RBP20.13■□□□□ 0.81
TMEM53-202ENST00000372237 DUOXA2Q1HG44 320 aa20.13■□□□□ 0.81
TMEM53-202ENST00000372237 SMTNL2Q2TAL5 461 aa20.13■□□□□ 0.81
TMEM53-202ENST00000372237 TRPM4Q8TD43 1214 aa20.13■□□□□ 0.81
TMEM53-202ENST00000372237 TFAP2BQ92481 460 aa20.13■□□□□ 0.81
TMEM53-202ENST00000372237 L3MBTL3Q96JM7 780 aaPredicted RBP20.13■□□□□ 0.81
TMEM53-202ENST00000372237 LRRC37BQ96QE4 947 aa20.13■□□□□ 0.81
TMEM53-202ENST00000372237 IGKV6D-21A0A0A0MT36 114 aa20.12■□□□□ 0.81
TMEM53-202ENST00000372237 FAM189A1O60320 539 aa20.12■□□□□ 0.81
TMEM53-202ENST00000372237 CDH5P33151 784 aaPredicted RBP20.12■□□□□ 0.81
TMEM53-202ENST00000372237 PSMC4P43686 418 aa20.12■□□□□ 0.81
TMEM53-202ENST00000372237 CTCFP49711 727 aaPredicted RBP20.12■□□□□ 0.81
TMEM53-202ENST00000372237 GEMIN4P57678 1058 aaKnown RBP20.12■□□□□ 0.81
TMEM53-202ENST00000372237 CNTN2Q02246 1040 aa20.12■□□□□ 0.81
TMEM53-202ENST00000372237 GRM1Q13255 1194 aa20.12■□□□□ 0.81
TMEM53-202ENST00000372237 MOGSQ13724 837 aa20.12■□□□□ 0.81
TMEM53-202ENST00000372237 SLC1A5Q15758 541 aa20.12■□□□□ 0.81
TMEM53-202ENST00000372237 HHATQ5VTY9 493 aa20.12■□□□□ 0.81
TMEM53-202ENST00000372237 POLNQ7Z5Q5 900 aa20.12■□□□□ 0.81
TMEM53-202ENST00000372237 DNERQ8NFT8 737 aa20.12■□□□□ 0.81
TMEM53-202ENST00000372237 MRPL4Q9BYD3 311 aaKnown RBP20.12■□□□□ 0.81
TMEM53-202ENST00000372237 ZWILCHQ9H900 591 aa20.12■□□□□ 0.81
TMEM53-202ENST00000372237 ZNF112Q9UJU3 913 aa20.12■□□□□ 0.81
TMEM53-202ENST00000372237 STRIP2Q9ULQ0 834 aa20.12■□□□□ 0.81
TMEM53-202ENST00000372237 PCDHGC3Q9UN70 934 aa20.12■□□□□ 0.81
TMEM53-202ENST00000372237 FARP1Q9Y4F1 1045 aaPredicted RBP20.12■□□□□ 0.81
TMEM53-202ENST00000372237 LCTP09848 1927 aa20.12■□□□□ 0.81
TMEM53-202ENST00000372237 TYROBPO43914 113 aa20.11■□□□□ 0.81
TMEM53-202ENST00000372237 MSCO60682 206 aa20.11■□□□□ 0.81
TMEM53-202ENST00000372237 EDF1O60869 148 aaKnown RBP20.11■□□□□ 0.81
TMEM53-202ENST00000372237 PHBP35232 272 aa20.11■□□□□ 0.81
TMEM53-202ENST00000372237 RFC1P35251 1148 aaPredicted RBP20.11■□□□□ 0.81
TMEM53-202ENST00000372237 ATP11AP98196 1134 aa20.11■□□□□ 0.81
TMEM53-202ENST00000372237 OTUD4Q01804 1114 aaKnown RBP20.11■□□□□ 0.81
TMEM53-202ENST00000372237 RASA2Q15283 850 aa20.11■□□□□ 0.81
TMEM53-202ENST00000372237 TARBP2Q15633 366 aaKnown RBP20.11■□□□□ 0.81
TMEM53-202ENST00000372237 ACTL9Q8TC94 416 aa20.11■□□□□ 0.81
TMEM53-202ENST00000372237 PYROXD1Q8WU10 500 aa20.11■□□□□ 0.81
TMEM53-202ENST00000372237 PRPF31Q8WWY3 499 aaKnown RBP20.11■□□□□ 0.81
TMEM53-202ENST00000372237 PCYT2Q99447 389 aa20.11■□□□□ 0.81
TMEM53-202ENST00000372237 MAK16Q9BXY0 300 aaKnown RBP20.11■□□□□ 0.81
TMEM53-202ENST00000372237 GPRC5DQ9NZD1 345 aa20.11■□□□□ 0.81
TMEM53-202ENST00000372237 NOP53Q9NZM5 478 aaKnown RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms