RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 CD274Q9NZQ7 290 aa15.86■□□□□ 0.13
COL5A1-201ENST00000371817 C3orf70A6NLC5 250 aaPredicted RBP15.86■□□□□ 0.13
COL5A1-201ENST00000371817 FAM83EQ2M2I3 478 aa15.86■□□□□ 0.13
COL5A1-201ENST00000371817 SEL1L3Q68CR1 1132 aa15.86■□□□□ 0.13
COL5A1-201ENST00000371817 FRMD5Q7Z6J6 570 aa15.86■□□□□ 0.13
COL5A1-201ENST00000371817 ENOPH1Q9UHY7 261 aa15.86■□□□□ 0.13
COL5A1-201ENST00000371817 FSBPO95073 299 aa15.85■□□□□ 0.13
COL5A1-201ENST00000371817 KRT35Q92764 455 aa15.85■□□□□ 0.13
COL5A1-201ENST00000371817 A0A1B0GTH6 734 aa15.85■□□□□ 0.13
COL5A1-201ENST00000371817 HIST1H2AGP0C0S8 130 aaPredicted RBP15.85■□□□□ 0.13
COL5A1-201ENST00000371817 HIST1H2ADP20671 130 aa15.85■□□□□ 0.13
COL5A1-201ENST00000371817 COASYQ13057 564 aa15.85■□□□□ 0.13
COL5A1-201ENST00000371817 NME3Q13232 169 aa15.85■□□□□ 0.13
COL5A1-201ENST00000371817 C11orf74Q86VG3 221 aa15.85■□□□□ 0.13
COL5A1-201ENST00000371817 SKA1Q96BD8 255 aa15.85■□□□□ 0.13
COL5A1-201ENST00000371817 HIST1H2AHQ96KK5 128 aa15.85■□□□□ 0.13
COL5A1-201ENST00000371817 HIST1H2AJQ99878 128 aa15.85■□□□□ 0.13
COL5A1-201ENST00000371817 H2AFJQ9BTM1 129 aa15.85■□□□□ 0.13
COL5A1-201ENST00000371817 COMMD8Q9NX08 183 aa15.85■□□□□ 0.13
COL5A1-201ENST00000371817 EHD3Q9NZN3 535 aa15.85■□□□□ 0.13
COL5A1-201ENST00000371817 GJA3Q9Y6H8 435 aa15.85■□□□□ 0.13
COL5A1-201ENST00000371817 MYL12AP19105 171 aa15.85■□□□□ 0.13
COL5A1-201ENST00000371817 TNFAIP1Q13829 316 aa15.85■□□□□ 0.13
COL5A1-201ENST00000371817 USP38Q8NB14 1042 aa15.85■□□□□ 0.13
COL5A1-201ENST00000371817 CCDC126Q96EE4 140 aa15.85■□□□□ 0.13
COL5A1-201ENST00000371817 CORO1CQ9ULV4 474 aaPredicted RBP15.85■□□□□ 0.13
COL5A1-201ENST00000371817 OVGP1Q12889 678 aa15.85■□□□□ 0.13
COL5A1-201ENST00000371817 GTF2H3Q13889 308 aa15.85■□□□□ 0.13
COL5A1-201ENST00000371817 ERICH5Q6P6B1 374 aa15.85■□□□□ 0.13
COL5A1-201ENST00000371817 STK32AQ8WU08 396 aa15.85■□□□□ 0.13
COL5A1-201ENST00000371817 LIFRP42702 1097 aa15.85■□□□□ 0.13
COL5A1-201ENST00000371817 HSD17B4P51659 736 aa15.85■□□□□ 0.13
COL5A1-201ENST00000371817 GLYCTKQ8IVS8 523 aa15.85■□□□□ 0.13
COL5A1-201ENST00000371817 TRIM62Q9BVG3 475 aa15.85■□□□□ 0.13
COL5A1-201ENST00000371817 ZNF222Q9UK12 451 aa15.85■□□□□ 0.13
COL5A1-201ENST00000371817 TM9SF1O15321 606 aa15.85■□□□□ 0.13
COL5A1-201ENST00000371817 TEX28O15482 410 aa15.85■□□□□ 0.13
COL5A1-201ENST00000371817 IDI1Q13907 227 aa15.85■□□□□ 0.13
COL5A1-201ENST00000371817 PIGHQ14442 188 aaPredicted RBP15.85■□□□□ 0.13
COL5A1-201ENST00000371817 FAM111AQ96PZ2 611 aa15.85■□□□□ 0.13
COL5A1-201ENST00000371817 BTBD10Q9BSF8 475 aa15.85■□□□□ 0.13
COL5A1-201ENST00000371817 SSU72P8A0A1W2PR75 194 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 NDUFS3O75489 264 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 CCT8P50990 548 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 GMFBP60983 142 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 SNX17Q15036 470 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 DDB1Q16531 1140 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 CHSY1Q86X52 802 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 DEFB107AQ8IZN7 70 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 EFHBQ8N7U6 833 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 SETD9Q8NE22 299 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 MOSPD2Q8NHP6 518 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 KDM5BQ9UGL1 1544 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 ITGA8P53708 1063 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 ABCB5Q2M3G0 1257 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 PLEKHG4BQ96PX9 1271 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 PFDN2Q9UHV9 154 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 CHN2P52757 468 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 MIGA2Q7L4E1 593 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 ALOX5P09917 674 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 RCVRNP35243 200 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 RPS7P62081 194 aaKnown RBP15.84■□□□□ 0.13
COL5A1-201ENST00000371817 EFR3AQ14156 821 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 CACHD1Q5VU97 1274 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 EPHX4Q8IUS5 362 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 UNC5CLQ8IV45 518 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 KYQ8NBH2 561 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 SPATA18Q8TC71 538 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 BAIAP2Q9UQB8 552 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 FAM92AA1XBS5 289 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 POTEIP0CG38 1075 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 LMBRD2Q68DH5 695 aaPredicted RBP15.84■□□□□ 0.13
COL5A1-201ENST00000371817 TMPRSS6Q8IU80 811 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 KBTBD2Q8IY47 623 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 TTC39CQ8N584 583 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 AGPAT1Q99943 283 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 HK2P52789 917 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 TRAPPC3LQ5T215 181 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 PRCCQ92733 491 aaPredicted RBP15.84■□□□□ 0.13
COL5A1-201ENST00000371817 DCUN1D1Q96GG9 259 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 C9orf16Q9BUW7 83 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 MYOM2P54296 1465 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 NPR3P17342 541 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 SRP54P61011 504 aaKnown RBP15.84■□□□□ 0.13
COL5A1-201ENST00000371817 TUBA1BP68363 451 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 TCHHL1Q5QJ38 904 aaPredicted RBP15.84■□□□□ 0.13
COL5A1-201ENST00000371817 TRIM65Q6PJ69 517 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 TUBA1AQ71U36 451 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 GANCQ8TET4 914 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 HPS1Q92902 700 aa15.84■□□□□ 0.13
COL5A1-201ENST00000371817 ZNF496Q96IT1 587 aaPredicted RBP15.84■□□□□ 0.13
COL5A1-201ENST00000371817 WDR12Q9GZL7 423 aaKnown RBP15.84■□□□□ 0.13
COL5A1-201ENST00000371817 ECDO95905 644 aaPredicted RBP15.83■□□□□ 0.13
COL5A1-201ENST00000371817 MROH9Q5TGP6 573 aa15.83■□□□□ 0.13
COL5A1-201ENST00000371817 CYP4Z2PQ8N1L4 340 aa15.83■□□□□ 0.13
COL5A1-201ENST00000371817 TMBIM4Q9HC24 238 aa15.83■□□□□ 0.13
COL5A1-201ENST00000371817 PTGES3LE9PB15 166 aa15.83■□□□□ 0.13
COL5A1-201ENST00000371817 GSTM1P09488 218 aa15.83■□□□□ 0.13
COL5A1-201ENST00000371817 CASP1P29466 404 aa15.83■□□□□ 0.13
COL5A1-201ENST00000371817 LIN54Q6MZP7 749 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms