RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 SPATA31D1Q6ZQQ2 1576 aa20.51■□□□□ 0.87
LMO4-202ENST00000370544 TMEM120BA0PK00 339 aa20.51■□□□□ 0.87
LMO4-202ENST00000370544 CYP11B1P15538 503 aa20.51■□□□□ 0.87
LMO4-202ENST00000370544 IL10P22301 178 aa20.51■□□□□ 0.87
LMO4-202ENST00000370544 NAPEPLDQ6IQ20 393 aa20.51■□□□□ 0.87
LMO4-202ENST00000370544 ABI2Q9NYB9 513 aaPredicted RBP20.51■□□□□ 0.87
LMO4-202ENST00000370544 TWF1Q12792 350 aa20.51■□□□□ 0.87
LMO4-202ENST00000370544 KIZQ2M2Z5 673 aa20.51■□□□□ 0.87
LMO4-202ENST00000370544 RARS2Q5T160 578 aaKnown RBP20.51■□□□□ 0.87
LMO4-202ENST00000370544 FAM129AQ9BZQ8 928 aa20.51■□□□□ 0.87
LMO4-202ENST00000370544 DDX5P17844 614 aaKnown RBP20.5■□□□□ 0.87
LMO4-202ENST00000370544 PTGER2P43116 358 aa20.5■□□□□ 0.87
LMO4-202ENST00000370544 ARHGEF7Q14155 803 aa20.5■□□□□ 0.87
LMO4-202ENST00000370544 C3orf67Q6ZVT6 689 aa20.5■□□□□ 0.87
LMO4-202ENST00000370544 ZNF720Q7Z2F6 126 aa20.5■□□□□ 0.87
LMO4-202ENST00000370544 DNAJC5Q9H3Z4 198 aa20.5■□□□□ 0.87
LMO4-202ENST00000370544 COG4Q9H9E3 785 aa20.5■□□□□ 0.87
LMO4-202ENST00000370544 E2F8A0AVK6 867 aa20.5■□□□□ 0.87
LMO4-202ENST00000370544 HNRNPCL2B2RXH8 293 aa20.5■□□□□ 0.87
LMO4-202ENST00000370544 M0QYT0 321 aa20.5■□□□□ 0.87
LMO4-202ENST00000370544 MEFVO15553 781 aaPredicted RBP20.5■□□□□ 0.87
LMO4-202ENST00000370544 VDRP11473 427 aa20.5■□□□□ 0.87
LMO4-202ENST00000370544 ALDH1A3P47895 512 aa20.5■□□□□ 0.87
LMO4-202ENST00000370544 C4orf19Q8IY42 314 aa20.5■□□□□ 0.87
LMO4-202ENST00000370544 FOPNLQ96NB1 174 aa20.5■□□□□ 0.87
LMO4-202ENST00000370544 KLF6Q99612 283 aaPredicted RBP20.5■□□□□ 0.87
LMO4-202ENST00000370544 SCHIP1Q9P0W5 487 aaPredicted RBP20.5■□□□□ 0.87
LMO4-202ENST00000370544 GPR182O15218 404 aa20.5■□□□□ 0.87
LMO4-202ENST00000370544 CASP7P55210 303 aa20.5■□□□□ 0.87
LMO4-202ENST00000370544 TDRD10Q5VZ19 366 aaKnown RBP20.5■□□□□ 0.87
LMO4-202ENST00000370544 LATS2Q9NRM7 1088 aa20.5■□□□□ 0.87
LMO4-202ENST00000370544 SHMT1P34896 483 aa20.5■□□□□ 0.87
LMO4-202ENST00000370544 SYTL5Q8TDW5 730 aaPredicted RBP20.5■□□□□ 0.87
LMO4-202ENST00000370544 FIGNQ5HY92 759 aa20.49■□□□□ 0.87
LMO4-202ENST00000370544 RBM43Q6ZSC3 357 aaKnown RBP20.49■□□□□ 0.87
LMO4-202ENST00000370544 TMC2Q8TDI7 906 aa20.49■□□□□ 0.87
LMO4-202ENST00000370544 PPP2R3BQ9Y5P8 575 aa20.49■□□□□ 0.87
LMO4-202ENST00000370544 COL3A1P02461 1466 aaPredicted RBP20.49■□□□□ 0.87
LMO4-202ENST00000370544 EPHB2P29323 1055 aa20.49■□□□□ 0.87
LMO4-202ENST00000370544 NBPF12Q5TAG4 269 aaPredicted RBP20.49■□□□□ 0.87
LMO4-202ENST00000370544 MST1RQ04912 1400 aa20.49■□□□□ 0.87
LMO4-202ENST00000370544 SUPT3HB4E1H0 165 aa20.49■□□□□ 0.87
LMO4-202ENST00000370544 SUPT3HO75486 399 aa20.49■□□□□ 0.87
LMO4-202ENST00000370544 VTNP04004 478 aa20.49■□□□□ 0.87
LMO4-202ENST00000370544 STAG3L1P0CL83 205 aa20.49■□□□□ 0.87
LMO4-202ENST00000370544 GCLCP48506 637 aaPredicted RBP20.49■□□□□ 0.87
LMO4-202ENST00000370544 ANKRD7Q92527 254 aa20.49■□□□□ 0.87
LMO4-202ENST00000370544 FRMD8Q9BZ67 464 aaPredicted RBP20.49■□□□□ 0.87
LMO4-202ENST00000370544 CTCFP49711 727 aaPredicted RBP20.49■□□□□ 0.87
LMO4-202ENST00000370544 VCPP55072 806 aaKnown RBP20.49■□□□□ 0.87
LMO4-202ENST00000370544 GEMIN4P57678 1058 aaKnown RBP20.49■□□□□ 0.87
LMO4-202ENST00000370544 LVRNQ6Q4G3 990 aa20.49■□□□□ 0.87
LMO4-202ENST00000370544 ACOT1Q86TX2 421 aa20.49■□□□□ 0.87
LMO4-202ENST00000370544 DDIT4Q9NX09 232 aa20.49■□□□□ 0.87
LMO4-202ENST00000370544 AP1G2O75843 785 aa20.48■□□□□ 0.87
LMO4-202ENST00000370544 CXCL9Q07325 125 aa20.48■□□□□ 0.87
LMO4-202ENST00000370544 SLC29A2Q14542 456 aa20.48■□□□□ 0.87
LMO4-202ENST00000370544 SPDYAQ5MJ70 313 aa20.48■□□□□ 0.87
LMO4-202ENST00000370544 ZNF669Q96BR6 464 aaPredicted RBP20.48■□□□□ 0.87
LMO4-202ENST00000370544 POP1Q99575 1024 aaKnown RBP20.48■□□□□ 0.87
LMO4-202ENST00000370544 CCDC90BQ9GZT6 254 aa20.48■□□□□ 0.87
LMO4-202ENST00000370544 WDCPQ9H6R7 721 aa20.48■□□□□ 0.87
LMO4-202ENST00000370544 YY1AP1Q9H869 796 aa20.48■□□□□ 0.87
LMO4-202ENST00000370544 CD274Q9NZQ7 290 aa20.48■□□□□ 0.87
LMO4-202ENST00000370544 KIAA1257Q9ULG3 409 aa20.48■□□□□ 0.87
LMO4-202ENST00000370544 AURKCQ9UQB9 309 aa20.48■□□□□ 0.87
LMO4-202ENST00000370544 CYP24A1Q07973 514 aa20.48■□□□□ 0.87
LMO4-202ENST00000370544 ATP6V0D2Q8N8Y2 350 aa20.48■□□□□ 0.87
LMO4-202ENST00000370544 CPB2Q96IY4 423 aa20.48■□□□□ 0.87
LMO4-202ENST00000370544 PDCD2LQ9BRP1 358 aa20.48■□□□□ 0.87
LMO4-202ENST00000370544 IL17RBQ9NRM6 502 aa20.48■□□□□ 0.87
LMO4-202ENST00000370544 TEKT2Q9UIF3 430 aa20.48■□□□□ 0.87
LMO4-202ENST00000370544 SYNDIG1LA6NDD5 238 aa20.48■□□□□ 0.87
LMO4-202ENST00000370544 PYGLP06737 847 aa20.48■□□□□ 0.87
LMO4-202ENST00000370544 FDFT1P37268 417 aa20.48■□□□□ 0.87
LMO4-202ENST00000370544 SKIV2LQ15477 1246 aaKnown RBP20.48■□□□□ 0.87
LMO4-202ENST00000370544 STAMBPL1Q96FJ0 436 aa20.48■□□□□ 0.87
LMO4-202ENST00000370544 NAF1Q96HR8 494 aaKnown RBP20.48■□□□□ 0.87
LMO4-202ENST00000370544 AGXT2Q9BYV1 514 aa20.48■□□□□ 0.87
LMO4-202ENST00000370544 FRMD8P1Q9BZ68 369 aaPredicted RBP20.48■□□□□ 0.87
LMO4-202ENST00000370544 KLC4Q9NSK0 619 aa20.48■□□□□ 0.87
LMO4-202ENST00000370544 GRID1Q9ULK0 1009 aa20.48■□□□□ 0.87
LMO4-202ENST00000370544 STIP1P31948 543 aaKnown RBP20.48■□□□□ 0.87
LMO4-202ENST00000370544 MAPK7Q13164 816 aa20.48■□□□□ 0.87
LMO4-202ENST00000370544 DEFB132Q7Z7B7 95 aa20.48■□□□□ 0.87
LMO4-202ENST00000370544 LINC00523Q86TU6 105 aa20.48■□□□□ 0.87
LMO4-202ENST00000370544 SHCBP1Q8NEM2 672 aa20.48■□□□□ 0.87
LMO4-202ENST00000370544 TSC22D3Q99576 134 aa20.48■□□□□ 0.87
LMO4-202ENST00000370544 RUBCNLQ9H714 662 aa20.48■□□□□ 0.87
LMO4-202ENST00000370544 PKP3Q9Y446 797 aa20.48■□□□□ 0.87
LMO4-202ENST00000370544 PTK6Q13882 451 aa20.48■□□□□ 0.87
LMO4-202ENST00000370544 DNAL1Q4LDG9 190 aa20.48■□□□□ 0.87
LMO4-202ENST00000370544 CENPPQ6IPU0 288 aa20.48■□□□□ 0.87
LMO4-202ENST00000370544 PACSIN1Q9BY11 444 aa20.48■□□□□ 0.87
LMO4-202ENST00000370544 PGM5Q15124 567 aa20.47■□□□□ 0.87
LMO4-202ENST00000370544 C9orf131Q5VYM1 1079 aa20.47■□□□□ 0.87
LMO4-202ENST00000370544 CASKIN2Q8WXE0 1202 aa20.47■□□□□ 0.87
LMO4-202ENST00000370544 L3MBTL3Q96JM7 780 aaPredicted RBP20.47■□□□□ 0.87
LMO4-202ENST00000370544 COLEC11Q9BWP8 271 aa20.47■□□□□ 0.87
LMO4-202ENST00000370544 EIF2AQ9BY44 585 aaKnown RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms