RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 GTF3C4Q9UKN8 822 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 PRRC2BQ5JSZ5 2229 aaKnown RBP16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 MYBPHLA2RUH7 354 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 MTMR11A4FU01 709 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 TEX33O43247 280 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 HCRTO43612 131 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 EPCAMP16422 314 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 ACO1P21399 889 aaKnown RBP16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 PSMC1P62191 440 aaKnown RBP16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 CCDC85BQ15834 202 aaPredicted RBP16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 CFAP221Q4G0U5 840 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 LLGL2Q6P1M3 1020 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 NEK11Q8NG66 645 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 WHAMMQ8TF30 809 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 UBE2Q2Q8WVN8 375 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 DPEP3Q9H4B8 488 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 CRTAC1Q9NQ79 661 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 MAN1C1Q9NR34 630 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 IFNKQ9P0W0 207 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 HMGXB4Q9UGU5 601 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 CNTN6Q9UQ52 1028 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 PCDHB5Q9Y5E4 795 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 PCDHB4Q9Y5E5 795 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 ATP2C2O75185 946 aa16.54■□□□□ 0.24
PRPF38B-202ENST00000370022 GLP2RO95838 553 aa16.54■□□□□ 0.24
PRPF38B-202ENST00000370022 PAEPP09466 180 aa16.54■□□□□ 0.24
PRPF38B-202ENST00000370022 HOXB8P17481 243 aaPredicted RBP16.54■□□□□ 0.24
PRPF38B-202ENST00000370022 HOXA9P31269 272 aa16.54■□□□□ 0.24
PRPF38B-202ENST00000370022 TUFMP49411 452 aaKnown RBP16.54■□□□□ 0.24
PRPF38B-202ENST00000370022 MDH1BQ5I0G3 518 aa16.54■□□□□ 0.24
PRPF38B-202ENST00000370022 GJB7Q6PEY0 223 aa16.54■□□□□ 0.24
PRPF38B-202ENST00000370022 SARM1Q6SZW1 724 aa16.54■□□□□ 0.24
PRPF38B-202ENST00000370022 TMEM270Q6UE05 265 aa16.54■□□□□ 0.24
PRPF38B-202ENST00000370022 ACOT1Q86TX2 421 aa16.54■□□□□ 0.24
PRPF38B-202ENST00000370022 SPATA2LQ8IUW3 424 aaPredicted RBP16.54■□□□□ 0.24
PRPF38B-202ENST00000370022 VN1R2Q8NFZ6 395 aa16.54■□□□□ 0.24
PRPF38B-202ENST00000370022 MAFAQ8NHW3 353 aaPredicted RBP16.54■□□□□ 0.24
PRPF38B-202ENST00000370022 KAT5Q92993 513 aa16.54■□□□□ 0.24
PRPF38B-202ENST00000370022 PCED1BQ96HM7 432 aa16.54■□□□□ 0.24
PRPF38B-202ENST00000370022 PGLYRP2Q96PD5 576 aa16.54■□□□□ 0.24
PRPF38B-202ENST00000370022 TWNKQ96RR1 684 aa16.54■□□□□ 0.24
PRPF38B-202ENST00000370022 NAA15Q9BXJ9 866 aaKnown RBP16.54■□□□□ 0.24
PRPF38B-202ENST00000370022 ELOVL4Q9GZR5 314 aa16.54■□□□□ 0.24
PRPF38B-202ENST00000370022 CYP4F11Q9HBI6 524 aa16.54■□□□□ 0.24
PRPF38B-202ENST00000370022 FAM207AQ9NSI2 230 aaPredicted RBP16.54■□□□□ 0.24
PRPF38B-202ENST00000370022 ZDHHC7Q9NXF8 308 aa16.54■□□□□ 0.24
PRPF38B-202ENST00000370022 CLDND1Q9NY35 253 aa16.54■□□□□ 0.24
PRPF38B-202ENST00000370022 KIAA1257Q9ULG3 409 aa16.54■□□□□ 0.24
PRPF38B-202ENST00000370022 SPDYE4A6NLX3 237 aa16.53■□□□□ 0.24
PRPF38B-202ENST00000370022 PRRG1O14668 218 aa16.53■□□□□ 0.24
PRPF38B-202ENST00000370022 KLK7P49862 253 aa16.53■□□□□ 0.24
PRPF38B-202ENST00000370022 RAD23BP54727 409 aa16.53■□□□□ 0.24
PRPF38B-202ENST00000370022 APBA1Q02410 837 aa16.53■□□□□ 0.24
PRPF38B-202ENST00000370022 SKIV2LQ15477 1246 aaKnown RBP16.53■□□□□ 0.24
PRPF38B-202ENST00000370022 ZNF394Q53GI3 561 aa16.53■□□□□ 0.24
PRPF38B-202ENST00000370022 IQCEQ6IPM2 695 aa16.53■□□□□ 0.24
PRPF38B-202ENST00000370022 SHC3Q92529 594 aa16.53■□□□□ 0.24
PRPF38B-202ENST00000370022 STK33Q9BYT3 514 aa16.53■□□□□ 0.24
PRPF38B-202ENST00000370022 GANQ9H2C0 597 aa16.53■□□□□ 0.24
PRPF38B-202ENST00000370022 SFXN1Q9H9B4 322 aa16.53■□□□□ 0.24
PRPF38B-202ENST00000370022 TMLHEQ9NVH6 421 aa16.53■□□□□ 0.24
PRPF38B-202ENST00000370022 ATP8B3O60423 1300 aa16.53■□□□□ 0.24
PRPF38B-202ENST00000370022 COL6A3P12111 3177 aa16.53■□□□□ 0.24
PRPF38B-202ENST00000370022 LINC01565O15544 149 aa16.52■□□□□ 0.24
PRPF38B-202ENST00000370022 ZMYND10O75800 440 aa16.52■□□□□ 0.24
PRPF38B-202ENST00000370022 NOL4O94818 638 aa16.52■□□□□ 0.24
PRPF38B-202ENST00000370022 PAPLNO95428 1278 aa16.52■□□□□ 0.24
PRPF38B-202ENST00000370022 VNN2O95498 520 aa16.52■□□□□ 0.24
PRPF38B-202ENST00000370022 C8AP07357 584 aa16.52■□□□□ 0.24
PRPF38B-202ENST00000370022 HNRNPA1P09651 372 aaKnown RBP eCLIP16.52■□□□□ 0.24
PRPF38B-202ENST00000370022 SPATA31D3P0C874 917 aa16.52■□□□□ 0.24
PRPF38B-202ENST00000370022 MAGEA11P43364 429 aa16.52■□□□□ 0.24
PRPF38B-202ENST00000370022 CYP27A1Q02318 531 aa16.52■□□□□ 0.24
PRPF38B-202ENST00000370022 DUSP4Q13115 394 aa16.52■□□□□ 0.24
PRPF38B-202ENST00000370022 PLD1Q13393 1074 aa16.52■□□□□ 0.24
PRPF38B-202ENST00000370022 ARHGAP44Q17R89 818 aa16.52■□□□□ 0.24
PRPF38B-202ENST00000370022 ANKRD54Q6NXT1 300 aa16.52■□□□□ 0.24
PRPF38B-202ENST00000370022 VSTM1Q6UX27 236 aa16.52■□□□□ 0.24
PRPF38B-202ENST00000370022 SPATA31D4Q6ZUB0 917 aa16.52■□□□□ 0.24
PRPF38B-202ENST00000370022 SLC4A11Q8NBS3 891 aa16.52■□□□□ 0.24
PRPF38B-202ENST00000370022 ATAD1Q8NBU5 361 aa16.52■□□□□ 0.24
PRPF38B-202ENST00000370022 RBBP8NLQ8NC74 664 aaPredicted RBP16.52■□□□□ 0.24
PRPF38B-202ENST00000370022 CMASQ8NFW8 434 aaPredicted RBP16.52■□□□□ 0.24
PRPF38B-202ENST00000370022 SLC7A14Q8TBB6 771 aa16.52■□□□□ 0.24
PRPF38B-202ENST00000370022 PPM1EQ8WY54 764 aa16.52■□□□□ 0.24
PRPF38B-202ENST00000370022 MYLPFQ96A32 169 aa16.52■□□□□ 0.24
PRPF38B-202ENST00000370022 IQCDQ96DY2 449 aa16.52■□□□□ 0.24
PRPF38B-202ENST00000370022 HEXIM2Q96MH2 286 aaKnown RBP16.52■□□□□ 0.24
PRPF38B-202ENST00000370022 NUP58Q9BVL2 599 aa16.52■□□□□ 0.24
PRPF38B-202ENST00000370022 XPO4Q9C0E2 1151 aaKnown RBP16.52■□□□□ 0.24
PRPF38B-202ENST00000370022 ABI2Q9NYB9 513 aaPredicted RBP16.52■□□□□ 0.24
PRPF38B-202ENST00000370022 COG5Q9UP83 839 aa16.52■□□□□ 0.24
PRPF38B-202ENST00000370022 FHOD1Q9Y613 1164 aa16.52■□□□□ 0.24
PRPF38B-202ENST00000370022 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 SEC24AO95486 1093 aa16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 POU2F2P09086 479 aa16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 HAPLN1P10915 354 aaPredicted RBP16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 KRT5P13647 590 aa16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 ZNF132P52740 706 aa16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 POLR2FP61218 127 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms