RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 SLC18A3Q16572 532 aa9.41□□□□□ -0.9
SNX27-201ENST00000368838 PTPN21Q16825 1174 aa9.41□□□□□ -0.9
SNX27-201ENST00000368838 DUOXA2Q1HG44 320 aa9.41□□□□□ -0.9
SNX27-201ENST00000368838 NOMO2Q5JPE7 1267 aa9.41□□□□□ -0.9
SNX27-201ENST00000368838 PHLDB3Q6NSJ2 640 aa9.41□□□□□ -0.9
SNX27-201ENST00000368838 NOTUMQ6P988 496 aa9.41□□□□□ -0.9
SNX27-201ENST00000368838 TMC5Q6UXY8 1006 aa9.41□□□□□ -0.9
SNX27-201ENST00000368838 AGMOQ6ZNB7 445 aa9.41□□□□□ -0.9
SNX27-201ENST00000368838 RRAGAQ7L523 313 aa9.41□□□□□ -0.9
SNX27-201ENST00000368838 FAM71AQ8IYT1 594 aa9.41□□□□□ -0.9
SNX27-201ENST00000368838 FBXL6Q8N531 539 aa9.41□□□□□ -0.9
SNX27-201ENST00000368838 TTC39CQ8N584 583 aa9.41□□□□□ -0.9
SNX27-201ENST00000368838 KREMEN2Q8NCW0 462 aa9.41□□□□□ -0.9
SNX27-201ENST00000368838 CPLX3Q8WVH0 158 aa9.41□□□□□ -0.9
SNX27-201ENST00000368838 ZNF516Q92618 1163 aa9.41□□□□□ -0.9
SNX27-201ENST00000368838 CASP10Q92851 521 aa9.41□□□□□ -0.9
SNX27-201ENST00000368838 IGSF21Q96ID5 467 aa9.41□□□□□ -0.9
SNX27-201ENST00000368838 PPP1R13BQ96KQ4 1090 aa9.41□□□□□ -0.9
SNX27-201ENST00000368838 SPAG5Q96R06 1193 aa9.41□□□□□ -0.9
SNX27-201ENST00000368838 CHP1Q99653 195 aa9.41□□□□□ -0.9
SNX27-201ENST00000368838 ADPGKQ9BRR6 497 aa9.41□□□□□ -0.9
SNX27-201ENST00000368838 APOL6Q9BWW8 343 aa9.41□□□□□ -0.9
SNX27-201ENST00000368838 ZBP1Q9H171 429 aa9.41□□□□□ -0.9
SNX27-201ENST00000368838 PDZD7Q9H5P4 517 aa9.41□□□□□ -0.9
SNX27-201ENST00000368838 NHEJ1Q9H9Q4 299 aaPredicted RBP9.41□□□□□ -0.9
SNX27-201ENST00000368838 PAXBP1Q9Y5B6 917 aa9.41□□□□□ -0.9
SNX27-201ENST00000368838 CITO14578 2027 aa9.41□□□□□ -0.9
SNX27-201ENST00000368838 SOWAHDA6NJG2 315 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 F8W810 466 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 ERLIN2O94905 339 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 ASS1P00966 412 aaKnown RBP9.4□□□□□ -0.9
SNX27-201ENST00000368838 GALTP07902 379 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 TRIM49P0CI25 452 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 TRIM49CP0CI26 452 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 PAX3P23760 479 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 ATICP31939 592 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 GCLMP48507 274 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 VAV2P52735 878 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 MFAP3P55082 362 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 BPIFB4P59827 614 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 TUBB2AQ13885 445 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 PTPN14Q15678 1187 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 ZBTB6Q15916 424 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 SGSM1Q2NKQ1 1148 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 ZNF568Q3ZCX4 644 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 UBXN11Q5T124 520 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 IQCEQ6IPM2 695 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 CES5AQ6NT32 575 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 PPP1R2P3Q6NXS1 205 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 SLC27A1Q6PCB7 646 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 ALKAL1Q6UXT8 129 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.4□□□□□ -0.9
SNX27-201ENST00000368838 VPS36Q86VN1 386 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 CDR2LQ86X02 465 aaPredicted RBP9.4□□□□□ -0.9
SNX27-201ENST00000368838 ZNF677Q86XU0 584 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 RNF10Q8N5U6 811 aaKnown RBP9.4□□□□□ -0.9
SNX27-201ENST00000368838 ZSWIM2Q8NEG5 633 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 SLC30A5Q8TAD4 765 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 RSPH1Q8WYR4 309 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 RABGGTAQ92696 567 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 SAAL1Q96ER3 474 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 ASIC4Q96FT7 647 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 CPB2Q96IY4 423 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 ZBTB45Q96K62 511 aaPredicted RBP9.4□□□□□ -0.9
SNX27-201ENST00000368838 NT5C1BQ96P26 610 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 CRACR2AQ9BSW2 395 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 TCHPQ9BT92 498 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 TUBB2BQ9BVA1 445 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 EIF2AQ9BY44 585 aaKnown RBP9.4□□□□□ -0.9
SNX27-201ENST00000368838 TSGA10Q9BZW7 698 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 GPR88Q9GZN0 384 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 DNAJC12Q9UKB3 198 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 PRG3Q9Y2Y8 225 aaPredicted RBP9.4□□□□□ -0.9
SNX27-201ENST00000368838 HES2Q9Y543 173 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 FHOD1Q9Y613 1164 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 USP34Q70CQ2 3546 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 MIA3Q5JRA6 1907 aa9.4□□□□□ -0.9
SNX27-201ENST00000368838 ANK1P16157 1881 aa9.4□□□□□ -0.91
SNX27-201ENST00000368838 ZFHX2Q9C0A1 2572 aaPredicted RBP9.4□□□□□ -0.91
SNX27-201ENST00000368838 GOLGA8IPA6NC78 632 aa9.39□□□□□ -0.91
SNX27-201ENST00000368838 GOLGA8JA6NMD2 632 aa9.39□□□□□ -0.91
SNX27-201ENST00000368838 CFAP99D6REC4 459 aa9.39□□□□□ -0.91
SNX27-201ENST00000368838 ZNF623O75123 536 aa9.39□□□□□ -0.91
SNX27-201ENST00000368838 CTSAP10619 480 aa9.39□□□□□ -0.91
SNX27-201ENST00000368838 GZMAP12544 262 aa9.39□□□□□ -0.91
SNX27-201ENST00000368838 KCNE1P15382 129 aa9.39□□□□□ -0.91
SNX27-201ENST00000368838 HOXB8P17481 243 aaPredicted RBP9.39□□□□□ -0.91
SNX27-201ENST00000368838 CYP3A5P20815 502 aa9.39□□□□□ -0.91
SNX27-201ENST00000368838 ACOT2P49753 483 aa9.39□□□□□ -0.91
SNX27-201ENST00000368838 RAB27AP51159 221 aa9.39□□□□□ -0.91
SNX27-201ENST00000368838 KIF11P52732 1056 aa9.39□□□□□ -0.91
SNX27-201ENST00000368838 KLHL30Q0D2K2 578 aa9.39□□□□□ -0.91
SNX27-201ENST00000368838 TCF15Q12870 199 aa9.39□□□□□ -0.91
SNX27-201ENST00000368838 DRAP1Q14919 205 aaPredicted RBP9.39□□□□□ -0.91
SNX27-201ENST00000368838 ENOX2Q16206 610 aaKnown RBP9.39□□□□□ -0.91
SNX27-201ENST00000368838 TDRD10Q5VZ19 366 aaKnown RBP9.39□□□□□ -0.91
SNX27-201ENST00000368838 EEF1DP3Q658K8 133 aa9.39□□□□□ -0.91
SNX27-201ENST00000368838 MAMSTRQ6ZN01 415 aa9.39□□□□□ -0.91
SNX27-201ENST00000368838 BMP8AQ7Z5Y6 402 aa9.39□□□□□ -0.91
SNX27-201ENST00000368838 DDX53Q86TM3 631 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms