RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 FASTKD3Q14CZ7 662 aaKnown RBP18.31■□□□□ 0.52
CHTOP-203ENST00000368690 KLHL38Q2WGJ6 581 aa18.31■□□□□ 0.52
CHTOP-203ENST00000368690 WDR72Q3MJ13 1102 aa18.31■□□□□ 0.52
CHTOP-203ENST00000368690 RINLQ6ZS11 566 aa18.31■□□□□ 0.52
CHTOP-203ENST00000368690 RCOR2Q8IZ40 523 aa18.31■□□□□ 0.52
CHTOP-203ENST00000368690 B4GALNT2Q8NHY0 566 aa18.31■□□□□ 0.52
CHTOP-203ENST00000368690 MZB1Q8WU39 189 aa18.31■□□□□ 0.52
CHTOP-203ENST00000368690 VCPIP1Q96JH7 1222 aa18.31■□□□□ 0.52
CHTOP-203ENST00000368690 UNC45AQ9H3U1 944 aa18.31■□□□□ 0.52
CHTOP-203ENST00000368690 EHMT1Q9H9B1 1298 aa18.31■□□□□ 0.52
CHTOP-203ENST00000368690 KCNK13Q9HB14 408 aa18.31■□□□□ 0.52
CHTOP-203ENST00000368690 RABGEF1Q9UJ41 708 aa18.31■□□□□ 0.52
CHTOP-203ENST00000368690 DICER1Q9UPY3 1922 aaKnown RBP18.31■□□□□ 0.52
CHTOP-203ENST00000368690 CYP1A1P04798 512 aaPredicted RBP18.31■□□□□ 0.52
CHTOP-203ENST00000368690 TSHRP16473 764 aa18.31■□□□□ 0.52
CHTOP-203ENST00000368690 SERPINB4P48594 390 aa18.31■□□□□ 0.52
CHTOP-203ENST00000368690 LIN9Q5TKA1 542 aa18.31■□□□□ 0.52
CHTOP-203ENST00000368690 C9orf131Q5VYM1 1079 aa18.31■□□□□ 0.52
CHTOP-203ENST00000368690 NET1Q7Z628 596 aaPredicted RBP18.31■□□□□ 0.52
CHTOP-203ENST00000368690 PCGF5Q86SE9 256 aa18.31■□□□□ 0.52
CHTOP-203ENST00000368690 SIAH1Q8IUQ4 282 aa18.31■□□□□ 0.52
CHTOP-203ENST00000368690 ZBED8Q8IZ13 594 aa18.31■□□□□ 0.52
CHTOP-203ENST00000368690 SCYL3Q8IZE3 742 aa18.31■□□□□ 0.52
CHTOP-203ENST00000368690 PDCD7Q8N8D1 485 aaKnown RBP18.31■□□□□ 0.52
CHTOP-203ENST00000368690 TEKT3Q9BXF9 490 aa18.31■□□□□ 0.52
CHTOP-203ENST00000368690 RANBP17Q9H2T7 1088 aaKnown RBP18.31■□□□□ 0.52
CHTOP-203ENST00000368690 MRPL47Q9HD33 250 aaKnown RBP18.31■□□□□ 0.52
CHTOP-203ENST00000368690 RAB20Q9NX57 234 aa18.31■□□□□ 0.52
CHTOP-203ENST00000368690 TBC1D30Q9Y2I9 924 aa18.31■□□□□ 0.52
CHTOP-203ENST00000368690 A0A0G2JND7 137 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 SMAPO00193 183 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 DLDP09622 509 aaKnown RBP18.3■□□□□ 0.52
CHTOP-203ENST00000368690 ARSEP51690 589 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 BPIFB4P59827 614 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 JAG1P78504 1218 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 ZBTB16Q05516 673 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 MCL1Q07820 350 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 NFX1Q12986 1120 aaKnown RBP18.3■□□□□ 0.52
CHTOP-203ENST00000368690 ANGEL2Q5VTE6 544 aaKnown RBP18.3■□□□□ 0.52
CHTOP-203ENST00000368690 PPP1R2P3Q6NXS1 205 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 MON1BQ7L1V2 547 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 TMPRSS6Q8IU80 811 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 KBTBD2Q8IY47 623 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 FAM81AQ8TBF8 368 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 TRPM4Q8TD43 1214 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 TCP10LQ8TDR4 215 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 TMEM120AQ9BXJ8 343 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 PCDHB2Q9Y5E7 798 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 CRABP2P29373 138 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 SERPINB3P29508 390 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 PTPN7P35236 360 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 PGM1P36871 562 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 PIK3CAP42336 1068 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 NSFP46459 744 aaKnown RBP18.3■□□□□ 0.52
CHTOP-203ENST00000368690 TAS2R40P59535 323 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 SNRNP35Q16560 246 aaKnown RBP18.3■□□□□ 0.52
CHTOP-203ENST00000368690 TRMT5Q32P41 509 aaKnown RBP18.3■□□□□ 0.52
CHTOP-203ENST00000368690 TBC1D25Q3MII6 688 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 CEP55Q53EZ4 464 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 TRIM72Q6ZMU5 477 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 USP37Q86T82 979 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 ATP11CQ8NB49 1132 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 CCDC110Q8TBZ0 833 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 OLFM3Q96PB7 478 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 HAPLN3Q96S86 360 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 RIT2Q99578 217 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 SPATA16Q9BXB7 569 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 DEFB129Q9H1M3 183 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 ACSS3Q9H6R3 686 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 PCDH9Q9HC56 1237 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 METTL5Q9NRN9 209 aaKnown RBP18.3■□□□□ 0.52
CHTOP-203ENST00000368690 DNPEPQ9ULA0 475 aa18.3■□□□□ 0.52
CHTOP-203ENST00000368690 KLF11O14901 512 aa18.29■□□□□ 0.52
CHTOP-203ENST00000368690 GPX6P59796 221 aa18.29■□□□□ 0.52
CHTOP-203ENST00000368690 SNAP25P60880 206 aa18.29■□□□□ 0.52
CHTOP-203ENST00000368690 DSG1Q02413 1049 aa18.29■□□□□ 0.52
CHTOP-203ENST00000368690 GPS1Q13098 491 aa18.29■□□□□ 0.52
CHTOP-203ENST00000368690 THOC5Q13769 683 aaKnown RBP18.29■□□□□ 0.52
CHTOP-203ENST00000368690 PRKD1Q15139 912 aaPredicted RBP18.29■□□□□ 0.52
CHTOP-203ENST00000368690 HAUS6Q7Z4H7 955 aa18.29■□□□□ 0.52
CHTOP-203ENST00000368690 CCNJLQ8IV13 435 aa18.29■□□□□ 0.52
CHTOP-203ENST00000368690 CENPKQ9BS16 269 aa18.29■□□□□ 0.52
CHTOP-203ENST00000368690 ZNF577Q9BSK1 485 aa18.29■□□□□ 0.52
CHTOP-203ENST00000368690 GPAMQ9HCL2 828 aa18.29■□□□□ 0.52
CHTOP-203ENST00000368690 EXOC7Q9UPT5 735 aa18.29■□□□□ 0.52
CHTOP-203ENST00000368690 ZNF148Q9UQR1 794 aa18.29■□□□□ 0.52
CHTOP-203ENST00000368690 ZHX2Q9Y6X8 837 aa18.29■□□□□ 0.52
CHTOP-203ENST00000368690 COMMD3-BMI1R4GMX3 469 aa18.29■□□□□ 0.52
CHTOP-203ENST00000368690 NDUFB10O96000 172 aa18.28■□□□□ 0.52
CHTOP-203ENST00000368690 PENKP01210 267 aaPredicted RBP18.28■□□□□ 0.52
CHTOP-203ENST00000368690 PIM1P11309 404 aaPredicted RBP18.28■□□□□ 0.52
CHTOP-203ENST00000368690 PDIA2Q13087 525 aaKnown RBP18.28■□□□□ 0.52
CHTOP-203ENST00000368690 LRRC23Q53EV4 343 aaPredicted RBP18.28■□□□□ 0.52
CHTOP-203ENST00000368690 STKLD1Q8NE28 680 aa18.28■□□□□ 0.52
CHTOP-203ENST00000368690 ZSWIM2Q8NEG5 633 aa18.28■□□□□ 0.52
CHTOP-203ENST00000368690 DTX3LQ8TDB6 740 aa18.28■□□□□ 0.52
CHTOP-203ENST00000368690 NKD2Q969F2 451 aaPredicted RBP18.28■□□□□ 0.52
CHTOP-203ENST00000368690 OXNAD1Q96HP4 312 aaPredicted RBP18.28■□□□□ 0.52
CHTOP-203ENST00000368690 FAM118BQ9BPY3 351 aa18.28■□□□□ 0.52
CHTOP-203ENST00000368690 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms