RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 CLUHO75153 1309 aa16.1■□□□□ 0.17
SMPDL3A-201ENST00000368440 A8MXQ7 604 aa16.1■□□□□ 0.17
SMPDL3A-201ENST00000368440 FAM163BP0C2L3 166 aa16.1■□□□□ 0.17
SMPDL3A-201ENST00000368440 P4HA1P13674 534 aa16.1■□□□□ 0.17
SMPDL3A-201ENST00000368440 ORC1Q13415 861 aa16.1■□□□□ 0.17
SMPDL3A-201ENST00000368440 CT47A1Q5JQC4 288 aaPredicted RBP16.1■□□□□ 0.17
SMPDL3A-201ENST00000368440 FAM171BQ6P995 826 aa16.1■□□□□ 0.17
SMPDL3A-201ENST00000368440 RTL10Q7L3V2 364 aa16.1■□□□□ 0.17
SMPDL3A-201ENST00000368440 ADHFE1Q8IWW8 467 aa16.1■□□□□ 0.17
SMPDL3A-201ENST00000368440 UHRF1Q96T88 793 aaPredicted RBP16.1■□□□□ 0.17
SMPDL3A-201ENST00000368440 SEPT5Q99719 369 aaPredicted RBP16.1■□□□□ 0.17
SMPDL3A-201ENST00000368440 ARID3AQ99856 593 aa16.1■□□□□ 0.17
SMPDL3A-201ENST00000368440 COL25A1Q9BXS0 654 aaPredicted RBP16.1■□□□□ 0.17
SMPDL3A-201ENST00000368440 WDR6Q9NNW5 1121 aaKnown RBP16.1■□□□□ 0.17
SMPDL3A-201ENST00000368440 CEP72Q9P209 647 aa16.1■□□□□ 0.17
SMPDL3A-201ENST00000368440 DNMT3BQ9UBC3 853 aaKnown RBP16.1■□□□□ 0.17
SMPDL3A-201ENST00000368440 XYLBO75191 536 aa16.1■□□□□ 0.17
SMPDL3A-201ENST00000368440 AFPP02771 609 aaKnown RBP16.1■□□□□ 0.17
SMPDL3A-201ENST00000368440 LRMPQ12912 555 aa16.1■□□□□ 0.17
SMPDL3A-201ENST00000368440 MDH1BQ5I0G3 518 aa16.1■□□□□ 0.17
SMPDL3A-201ENST00000368440 CYP26C1Q6V0L0 522 aa16.1■□□□□ 0.17
SMPDL3A-201ENST00000368440 CCDC150Q8NCX0 1101 aa16.1■□□□□ 0.17
SMPDL3A-201ENST00000368440 ENOX1Q8TC92 643 aaKnown RBP16.1■□□□□ 0.17
SMPDL3A-201ENST00000368440 SPPL2BQ8TCT7 592 aa16.1■□□□□ 0.17
SMPDL3A-201ENST00000368440 MYLPFQ96A32 169 aa16.1■□□□□ 0.17
SMPDL3A-201ENST00000368440 RPGRIP1Q96KN7 1286 aa16.1■□□□□ 0.17
SMPDL3A-201ENST00000368440 PRKAG3Q9UGI9 489 aa16.1■□□□□ 0.17
SMPDL3A-201ENST00000368440 NFE2L3Q9Y4A8 694 aa16.1■□□□□ 0.17
SMPDL3A-201ENST00000368440 PCDHB5Q9Y5E4 795 aa16.1■□□□□ 0.17
SMPDL3A-201ENST00000368440 N4BP1O75113 896 aaKnown RBP16.09■□□□□ 0.17
SMPDL3A-201ENST00000368440 LETM1O95202 739 aaPredicted RBP16.09■□□□□ 0.17
SMPDL3A-201ENST00000368440 POU2F2P09086 479 aa16.09■□□□□ 0.17
SMPDL3A-201ENST00000368440 HAPLN1P10915 354 aaPredicted RBP16.09■□□□□ 0.17
SMPDL3A-201ENST00000368440 ATF6P18850 670 aa16.09■□□□□ 0.17
SMPDL3A-201ENST00000368440 CD58P19256 250 aa16.09■□□□□ 0.17
SMPDL3A-201ENST00000368440 GPR15P49685 360 aa16.09■□□□□ 0.17
SMPDL3A-201ENST00000368440 NDST1P52848 882 aa16.09■□□□□ 0.17
SMPDL3A-201ENST00000368440 NFE2Q16621 373 aaPredicted RBP16.09■□□□□ 0.17
SMPDL3A-201ENST00000368440 MGAT5BQ3V5L5 792 aa16.09■□□□□ 0.17
SMPDL3A-201ENST00000368440 STKLD1Q8NE28 680 aa16.09■□□□□ 0.17
SMPDL3A-201ENST00000368440 LMO3Q8TAP4 145 aa16.09■□□□□ 0.17
SMPDL3A-201ENST00000368440 C2orf15Q8WU43 125 aaKnown RBP16.09■□□□□ 0.17
SMPDL3A-201ENST00000368440 TWNKQ96RR1 684 aa16.09■□□□□ 0.17
SMPDL3A-201ENST00000368440 TSPY26PQ9H489 355 aa16.09■□□□□ 0.17
SMPDL3A-201ENST00000368440 C19orf67A6NJJ6 358 aa16.08■□□□□ 0.17
SMPDL3A-201ENST00000368440 NRG2O14511 850 aaPredicted RBP16.08■□□□□ 0.17
SMPDL3A-201ENST00000368440 PMM2O15305 246 aa16.08■□□□□ 0.17
SMPDL3A-201ENST00000368440 PTPN1P18031 435 aaKnown RBP16.08■□□□□ 0.17
SMPDL3A-201ENST00000368440 CYP2F1P24903 491 aa16.08■□□□□ 0.17
SMPDL3A-201ENST00000368440 MTIF2P46199 727 aaKnown RBP16.08■□□□□ 0.17
SMPDL3A-201ENST00000368440 SMARCB1Q12824 385 aa16.08■□□□□ 0.17
SMPDL3A-201ENST00000368440 WDR44Q5JSH3 913 aa16.08■□□□□ 0.17
SMPDL3A-201ENST00000368440 HS6ST3Q8IZP7 471 aa16.08■□□□□ 0.17
SMPDL3A-201ENST00000368440 B3GALNT2Q8NCR0 500 aa16.08■□□□□ 0.17
SMPDL3A-201ENST00000368440 MYCBPAPQ8TBZ2 947 aa16.08■□□□□ 0.17
SMPDL3A-201ENST00000368440 PCED1BQ96HM7 432 aa16.08■□□□□ 0.17
SMPDL3A-201ENST00000368440 FUCA2Q9BTY2 467 aa16.08■□□□□ 0.17
SMPDL3A-201ENST00000368440 HSFX1Q9UBD0 423 aa16.08■□□□□ 0.17
SMPDL3A-201ENST00000368440 DOCK8Q8NF50 2099 aa16.08■□□□□ 0.16
SMPDL3A-201ENST00000368440 C2CD4DB7Z1M9 353 aa16.08■□□□□ 0.16
SMPDL3A-201ENST00000368440 LOC730098B7Z3J9 87 aa16.08■□□□□ 0.16
SMPDL3A-201ENST00000368440 RHOP08100 348 aa16.08■□□□□ 0.16
SMPDL3A-201ENST00000368440 CYP27A1Q02318 531 aa16.08■□□□□ 0.16
SMPDL3A-201ENST00000368440 INCA1Q0VD86 236 aa16.08■□□□□ 0.16
SMPDL3A-201ENST00000368440 SLC5A9Q2M3M2 681 aa16.08■□□□□ 0.16
SMPDL3A-201ENST00000368440 ANO6Q4KMQ2 910 aa16.08■□□□□ 0.16
SMPDL3A-201ENST00000368440 SDHAF4Q5VUM1 108 aa16.08■□□□□ 0.16
SMPDL3A-201ENST00000368440 GET4Q7L5D6 327 aaPredicted RBP16.08■□□□□ 0.16
SMPDL3A-201ENST00000368440 ACOT1Q86TX2 421 aa16.08■□□□□ 0.16
SMPDL3A-201ENST00000368440 SPATA2LQ8IUW3 424 aaPredicted RBP16.08■□□□□ 0.16
SMPDL3A-201ENST00000368440 RNF214Q8ND24 703 aa16.08■□□□□ 0.16
SMPDL3A-201ENST00000368440 GPR152Q8TDT2 470 aa16.08■□□□□ 0.16
SMPDL3A-201ENST00000368440 WHAMMQ8TF30 809 aa16.08■□□□□ 0.16
SMPDL3A-201ENST00000368440 CORO1BQ9BR76 489 aa16.08■□□□□ 0.16
SMPDL3A-201ENST00000368440 CYP3A43Q9HB55 503 aa16.08■□□□□ 0.16
SMPDL3A-201ENST00000368440 GREB1Q4ZG55 1949 aa16.07■□□□□ 0.16
SMPDL3A-201ENST00000368440 KCNJ18B7U540 433 aa16.07■□□□□ 0.16
SMPDL3A-201ENST00000368440 P4HA2O15460 535 aa16.07■□□□□ 0.16
SMPDL3A-201ENST00000368440 ALDH1A3P47895 512 aa16.07■□□□□ 0.16
SMPDL3A-201ENST00000368440 KCNJ12Q14500 433 aa16.07■□□□□ 0.16
SMPDL3A-201ENST00000368440 CFAP221Q4G0U5 840 aa16.07■□□□□ 0.16
SMPDL3A-201ENST00000368440 PABPC1LQ4VXU2 614 aaKnown RBP16.07■□□□□ 0.16
SMPDL3A-201ENST00000368440 FAM114A1Q8IWE2 563 aa16.07■□□□□ 0.16
SMPDL3A-201ENST00000368440 ITFG1Q8TB96 612 aa16.07■□□□□ 0.16
SMPDL3A-201ENST00000368440 GIPC2Q8TF65 315 aa16.07■□□□□ 0.16
SMPDL3A-201ENST00000368440 MYADMQ96S97 322 aa16.07■□□□□ 0.16
SMPDL3A-201ENST00000368440 RBSNQ9H1K0 784 aa16.07■□□□□ 0.16
SMPDL3A-201ENST00000368440 OBSL1O75147 1896 aa16.06■□□□□ 0.16
SMPDL3A-201ENST00000368440 CLDN5O00501 218 aa16.06■□□□□ 0.16
SMPDL3A-201ENST00000368440 CILPO75339 1184 aa16.06■□□□□ 0.16
SMPDL3A-201ENST00000368440 PTPN2P17706 415 aa16.06■□□□□ 0.16
SMPDL3A-201ENST00000368440 BDNFP23560 247 aa16.06■□□□□ 0.16
SMPDL3A-201ENST00000368440 FSHRP23945 695 aa16.06■□□□□ 0.16
SMPDL3A-201ENST00000368440 SSTR3P32745 418 aaPredicted RBP16.06■□□□□ 0.16
SMPDL3A-201ENST00000368440 CCR2P41597 374 aa16.06■□□□□ 0.16
SMPDL3A-201ENST00000368440 TUFMP49411 452 aaKnown RBP16.06■□□□□ 0.16
SMPDL3A-201ENST00000368440 NCAPHQ15003 741 aa16.06■□□□□ 0.16
SMPDL3A-201ENST00000368440 MAN2A1Q16706 1144 aa16.06■□□□□ 0.16
SMPDL3A-201ENST00000368440 MIIPQ5JXC2 388 aa16.06■□□□□ 0.16
SMPDL3A-201ENST00000368440 CDKAL1Q5VV42 579 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms