RNA–Protein interactions for RNA: ENST00000367503.7

SHPRH-202, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5 BASIC

Gene SHPRH, Length 5,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-202ENST00000367503 FAM193BQ96PV7 902 aaPredicted RBP12.8□□□□□ -0.36
SHPRH-202ENST00000367503 C2orf40Q9H1Z8 148 aa12.8□□□□□ -0.36
SHPRH-202ENST00000367503 RRN3Q9NYV6 651 aa12.8□□□□□ -0.36
SHPRH-202ENST00000367503 SNX13Q9Y5W8 968 aa12.8□□□□□ -0.36
SHPRH-202ENST00000367503 TBC1D12O60347 775 aa12.79□□□□□ -0.36
SHPRH-202ENST00000367503 VAV1P15498 845 aa12.79□□□□□ -0.36
SHPRH-202ENST00000367503 CCDC85BQ15834 202 aaPredicted RBP12.79□□□□□ -0.36
SHPRH-202ENST00000367503 MAB21L3Q8N8X9 362 aa12.79□□□□□ -0.36
SHPRH-202ENST00000367503 TNIP2Q8NFZ5 429 aa12.79□□□□□ -0.36
SHPRH-202ENST00000367503 TTC8Q8TAM2 541 aa12.79□□□□□ -0.36
SHPRH-202ENST00000367503 FBXO40Q9UH90 709 aa12.79□□□□□ -0.36
SHPRH-202ENST00000367503 AGO2Q9UKV8 859 aaKnown RBP12.79□□□□□ -0.36
SHPRH-202ENST00000367503 SOX13Q9UN79 622 aa12.79□□□□□ -0.36
SHPRH-202ENST00000367503 PPME1Q9Y570 386 aa12.79□□□□□ -0.36
SHPRH-202ENST00000367503 EIF3DO15371 548 aaKnown RBP eCLIP12.79□□□□□ -0.36
SHPRH-202ENST00000367503 PCYOX1LQ8NBM8 494 aa12.79□□□□□ -0.36
SHPRH-202ENST00000367503 KAZALD1Q96I82 304 aa12.79□□□□□ -0.36
SHPRH-202ENST00000367503 CCDC28BQ9BUN5 200 aa12.79□□□□□ -0.36
SHPRH-202ENST00000367503 LRMDAQ9H2I8 198 aa12.79□□□□□ -0.36
SHPRH-202ENST00000367503 RBAKQ9NYW8 714 aaPredicted RBP12.79□□□□□ -0.36
SHPRH-202ENST00000367503 DKK3Q9UBP4 350 aa12.79□□□□□ -0.36
SHPRH-202ENST00000367503 GABBR1Q9UBS5 961 aa12.79□□□□□ -0.36
SHPRH-202ENST00000367503 SLC24A2Q9UI40 661 aa12.79□□□□□ -0.36
SHPRH-202ENST00000367503 GTPBP10A4D1E9 387 aaKnown RBP12.79□□□□□ -0.36
SHPRH-202ENST00000367503 ATMINO43313 823 aaPredicted RBP12.79□□□□□ -0.36
SHPRH-202ENST00000367503 PGM3O95394 542 aa12.79□□□□□ -0.36
SHPRH-202ENST00000367503 PPARGP37231 505 aaPredicted RBP12.79□□□□□ -0.36
SHPRH-202ENST00000367503 GPC3P51654 580 aa12.79□□□□□ -0.36
SHPRH-202ENST00000367503 SLC27A3Q5K4L6 730 aa12.79□□□□□ -0.36
SHPRH-202ENST00000367503 C17orf50Q8WW18 174 aa12.79□□□□□ -0.36
SHPRH-202ENST00000367503 HSPBP1Q9NZL4 362 aa12.79□□□□□ -0.36
SHPRH-202ENST00000367503 BCS1LQ9Y276 419 aa12.79□□□□□ -0.36
SHPRH-202ENST00000367503 MYRFQ9Y2G1 1151 aa12.79□□□□□ -0.36
SHPRH-202ENST00000367503 SMNDC1O75940 238 aaKnown RBP eCLIP12.79□□□□□ -0.36
SHPRH-202ENST00000367503 RPA1P27694 616 aa12.79□□□□□ -0.36
SHPRH-202ENST00000367503 NCKAP1LP55160 1127 aa12.79□□□□□ -0.36
SHPRH-202ENST00000367503 POU5F1BQ06416 359 aa12.79□□□□□ -0.36
SHPRH-202ENST00000367503 RSBN1Q5VWQ0 802 aaPredicted RBP12.79□□□□□ -0.36
SHPRH-202ENST00000367503 RBM44Q6ZP01 1051 aaKnown RBP12.79□□□□□ -0.36
SHPRH-202ENST00000367503 DPP9Q86TI2 863 aa12.79□□□□□ -0.36
SHPRH-202ENST00000367503 PPIL6Q8IXY8 311 aa12.79□□□□□ -0.36
SHPRH-202ENST00000367503 DCPSQ96C86 337 aaKnown RBP12.79□□□□□ -0.36
SHPRH-202ENST00000367503 TDRD3Q9H7E2 651 aaKnown RBP12.79□□□□□ -0.36
SHPRH-202ENST00000367503 EML4Q9HC35 981 aaKnown RBP12.79□□□□□ -0.36
SHPRH-202ENST00000367503 PCDHA10Q9Y5I2 948 aa12.79□□□□□ -0.36
SHPRH-202ENST00000367503 ATP8B3O60423 1300 aa12.79□□□□□ -0.36
SHPRH-202ENST00000367503 USP1O94782 785 aa12.78□□□□□ -0.36
SHPRH-202ENST00000367503 BGNP21810 368 aa12.78□□□□□ -0.36
SHPRH-202ENST00000367503 RPL21P46778 160 aaKnown RBP12.78□□□□□ -0.36
SHPRH-202ENST00000367503 DUOXA2Q1HG44 320 aa12.78□□□□□ -0.36
SHPRH-202ENST00000367503 ZNF568Q3ZCX4 644 aa12.78□□□□□ -0.36
SHPRH-202ENST00000367503 FASTKD1Q53R41 847 aaKnown RBP12.78□□□□□ -0.36
SHPRH-202ENST00000367503 ZNF662Q6ZS27 426 aa12.78□□□□□ -0.36
SHPRH-202ENST00000367503 TMEM139Q8IV31 216 aa12.78□□□□□ -0.36
SHPRH-202ENST00000367503 C1orf131Q8NDD1 294 aaKnown RBP12.78□□□□□ -0.36
SHPRH-202ENST00000367503 ECSITQ9BQ95 431 aa12.78□□□□□ -0.36
SHPRH-202ENST00000367503 ADCY6O43306 1168 aa12.78□□□□□ -0.36
SHPRH-202ENST00000367503 RALAP11233 206 aa12.78□□□□□ -0.36
SHPRH-202ENST00000367503 MAP3K10Q02779 954 aa12.78□□□□□ -0.36
SHPRH-202ENST00000367503 PDK3Q15120 406 aa12.78□□□□□ -0.36
SHPRH-202ENST00000367503 SMAD1Q15797 465 aaKnown RBP12.78□□□□□ -0.36
SHPRH-202ENST00000367503 RGS21Q2M5E4 152 aa12.78□□□□□ -0.36
SHPRH-202ENST00000367503 DEFB107AQ8IZN7 70 aa12.78□□□□□ -0.36
SHPRH-202ENST00000367503 OSBPL7Q9BZF2 842 aa12.78□□□□□ -0.36
SHPRH-202ENST00000367503 NOL6Q9H6R4 1146 aaKnown RBP12.78□□□□□ -0.36
SHPRH-202ENST00000367503 KBTBD4Q9NVX7 518 aa12.78□□□□□ -0.36
SHPRH-202ENST00000367503 CPS1P31327 1500 aa12.78□□□□□ -0.36
SHPRH-202ENST00000367503 PMLP29590 882 aa12.78□□□□□ -0.36
SHPRH-202ENST00000367503 SLC5A9Q2M3M2 681 aa12.78□□□□□ -0.36
SHPRH-202ENST00000367503 SYCP2LQ5T4T6 812 aa12.78□□□□□ -0.36
SHPRH-202ENST00000367503 MTHFD1LQ6UB35 978 aa12.78□□□□□ -0.36
SHPRH-202ENST00000367503 ATG4AQ8WYN0 398 aa12.78□□□□□ -0.36
SHPRH-202ENST00000367503 ARHGEF26Q96DR7 871 aa12.78□□□□□ -0.36
SHPRH-202ENST00000367503 GCNAQ96QF7 691 aa12.78□□□□□ -0.36
SHPRH-202ENST00000367503 MRPL4Q9BYD3 311 aaKnown RBP12.78□□□□□ -0.36
SHPRH-202ENST00000367503 WDR35Q9P2L0 1181 aa12.78□□□□□ -0.36
SHPRH-202ENST00000367503 KLHL33A6NCF5 533 aa12.78□□□□□ -0.36
SHPRH-202ENST00000367503 RASA1P20936 1047 aa12.78□□□□□ -0.36
SHPRH-202ENST00000367503 CDH6P55285 790 aa12.78□□□□□ -0.36
SHPRH-202ENST00000367503 CDK16Q00536 496 aa12.78□□□□□ -0.36
SHPRH-202ENST00000367503 TMEM63BQ5T3F8 832 aa12.78□□□□□ -0.36
SHPRH-202ENST00000367503 TNS3Q68CZ2 1445 aa12.78□□□□□ -0.36
SHPRH-202ENST00000367503 PRUNE1Q86TP1 453 aa12.78□□□□□ -0.36
SHPRH-202ENST00000367503 ATXN7L3BQ96GX2 97 aa12.78□□□□□ -0.36
SHPRH-202ENST00000367503 TOPORSQ9NS56 1045 aaPredicted RBP12.78□□□□□ -0.36
SHPRH-202ENST00000367503 STAP1Q9ULZ2 295 aa12.78□□□□□ -0.36
SHPRH-202ENST00000367503 KIAA1210Q9ULL0 1709 aa12.78□□□□□ -0.36
SHPRH-202ENST00000367503 LRRC10BA6NIK2 292 aa12.77□□□□□ -0.36
SHPRH-202ENST00000367503 A8MUI8 341 aa12.77□□□□□ -0.36
SHPRH-202ENST00000367503 SHBGP04278 402 aa12.77□□□□□ -0.36
SHPRH-202ENST00000367503 PHKA2P46019 1235 aa12.77□□□□□ -0.36
SHPRH-202ENST00000367503 SWSAP1Q6NVH7 229 aa12.77□□□□□ -0.36
SHPRH-202ENST00000367503 EEPD1Q7L9B9 569 aa12.77□□□□□ -0.36
SHPRH-202ENST00000367503 ZCCHC7Q8N3Z6 543 aaKnown RBP12.77□□□□□ -0.36
SHPRH-202ENST00000367503 ATP8B4Q8TF62 1192 aa12.77□□□□□ -0.36
SHPRH-202ENST00000367503 TUBGCP3Q96CW5 907 aa12.77□□□□□ -0.36
SHPRH-202ENST00000367503 DGCR14Q96DF8 476 aaKnown RBP12.77□□□□□ -0.36
SHPRH-202ENST00000367503 MRPS26Q9BYN8 205 aaKnown RBP12.77□□□□□ -0.36
SHPRH-202ENST00000367503 RAVER2Q9HCJ3 691 aaKnown RBP12.77□□□□□ -0.36
SHPRH-202ENST00000367503 NYAP2Q9P242 653 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms