RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 HERC6Q8IVU3 1022 aa16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 PHACTR4Q8IZ21 702 aa16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 MMGT1Q8N4V1 131 aa16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 INPP5DQ92835 1189 aa16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 GPRASP2Q96D09 838 aa16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 STAMBPL1Q96FJ0 436 aa16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 RPRD1AQ96P16 312 aaPredicted RBP16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 HPGDP15428 266 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 TGM3Q08188 693 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 SETD3Q86TU7 594 aaPredicted RBP16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 KCTD17Q8N5Z5 321 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 SPATA18Q8TC71 538 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 WNK4Q96J92 1243 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 WDCPQ9H6R7 721 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 EXOSC4Q9NPD3 245 aaKnown RBP16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 ARL2BPQ9Y2Y0 163 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 ZBTB12Q9Y330 459 aaPredicted RBP16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 PCDHB2Q9Y5E7 798 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 SNTNA6NMZ2 147 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 PTPN7P35236 360 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 SLC18A3Q16572 532 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 PRR5LQ6MZQ0 368 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 CCSER1Q9C0I3 900 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 ANKEF1Q9NU02 776 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 APPL1Q9UKG1 709 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 CHMP2BQ9UQN3 213 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 TRPC5OSA6NMA1 111 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 FYNP06241 537 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 MYBP10242 640 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 FDFT1P37268 417 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 RFX3P48380 749 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 OXCT1P55809 520 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 RPL10AP62906 217 aaKnown RBP16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 PLEKHH3Q7Z736 793 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 P3H2Q8IVL5 708 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 CD302Q8IX05 232 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 FBXO32Q969P5 355 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 SH2D3AQ9BRG2 576 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.34■□□□□ 0.213e-11■■□□□ 11.9
NUCKS1-201ENST00000367142 TEX33O43247 280 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 PYGMP11217 842 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 GTF2H1P32780 548 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 KRT20P35900 424 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 EPHB3P54753 998 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 PLCL1Q15111 1095 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 MARCH10Q8NA82 808 aaPredicted RBP16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 MAGEB10Q96LZ2 347 aaPredicted RBP16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 TCP11X1B4DZS4 312 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 SNRPAP09012 282 aaKnown RBP16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 CENPCQ03188 943 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 ARID5BQ14865 1188 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 MRNIPQ6NTE8 343 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 IYDQ6PHW0 289 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 PPP1R14AQ96A00 147 aa16.34■□□□□ 0.21
NUCKS1-201ENST00000367142 P4HA2O15460 535 aa16.33■□□□□ 0.21
NUCKS1-201ENST00000367142 WBP4O75554 376 aaKnown RBP16.33■□□□□ 0.21
NUCKS1-201ENST00000367142 MUTP22033 750 aa16.33■□□□□ 0.21
NUCKS1-201ENST00000367142 GPC1P35052 558 aa16.33■□□□□ 0.21
NUCKS1-201ENST00000367142 FAM83EQ2M2I3 478 aa16.33■□□□□ 0.21
NUCKS1-201ENST00000367142 C16orf86Q6ZW13 317 aa16.33■□□□□ 0.21
NUCKS1-201ENST00000367142 PCSK9Q8NBP7 692 aaKnown RBP16.33■□□□□ 0.21
NUCKS1-201ENST00000367142 EME1Q96AY2 570 aa16.33■□□□□ 0.21
NUCKS1-201ENST00000367142 AGBL1Q96MI9 1066 aa16.33■□□□□ 0.21
NUCKS1-201ENST00000367142 TRIM9Q9C026 710 aa16.33■□□□□ 0.21
NUCKS1-201ENST00000367142 RMND5AQ9H871 391 aa16.33■□□□□ 0.21
NUCKS1-201ENST00000367142 GRID1Q9ULK0 1009 aa16.33■□□□□ 0.21
NUCKS1-201ENST00000367142 FOXO4P98177 505 aa16.33■□□□□ 0.21
NUCKS1-201ENST00000367142 TIGD7Q6NT04 549 aaPredicted RBP16.33■□□□□ 0.21
NUCKS1-201ENST00000367142 CCDC134Q9H6E4 229 aa16.33■□□□□ 0.21
NUCKS1-201ENST00000367142 ITGB3P05106 788 aa16.33■□□□□ 0.2
NUCKS1-201ENST00000367142 GALCP54803 685 aa16.33■□□□□ 0.2
NUCKS1-201ENST00000367142 PAN2Q504Q3 1202 aaKnown RBP16.33■□□□□ 0.2
NUCKS1-201ENST00000367142 ZNF484Q5JVG2 852 aa16.33■□□□□ 0.2
NUCKS1-201ENST00000367142 PARP9Q8IXQ6 854 aa16.33■□□□□ 0.2
NUCKS1-201ENST00000367142 NPHS2Q9NP85 383 aa16.33■□□□□ 0.2
NUCKS1-201ENST00000367142 DSEQ9UL01 958 aa16.33■□□□□ 0.2
NUCKS1-201ENST00000367142 CDY2AQ9Y6F7 541 aa16.33■□□□□ 0.2
NUCKS1-201ENST00000367142 CDY1Q9Y6F8 540 aa16.33■□□□□ 0.2
NUCKS1-201ENST00000367142 DMTNQ08495 405 aa16.33■□□□□ 0.2
NUCKS1-201ENST00000367142 CAMKK2Q96RR4 588 aa16.33■□□□□ 0.2
NUCKS1-201ENST00000367142 ASCC2Q9H1I8 757 aaPredicted RBP16.33■□□□□ 0.2
NUCKS1-201ENST00000367142 TRPM5Q9NZQ8 1165 aa16.33■□□□□ 0.2
NUCKS1-201ENST00000367142 SPATA31A6Q5VVP1 1343 aa16.33■□□□□ 0.2
NUCKS1-201ENST00000367142 VPS26AO75436 327 aa16.33■□□□□ 0.2
NUCKS1-201ENST00000367142 EPHB2P29323 1055 aa16.33■□□□□ 0.2
NUCKS1-201ENST00000367142 PDIA6Q15084 440 aa16.33■□□□□ 0.2
NUCKS1-201ENST00000367142 CCDC60Q8IWA6 550 aaPredicted RBP16.33■□□□□ 0.2
NUCKS1-201ENST00000367142 BHMTQ93088 406 aa16.33■□□□□ 0.2
NUCKS1-201ENST00000367142 GFM2Q969S9 779 aaKnown RBP16.33■□□□□ 0.2
NUCKS1-201ENST00000367142 CDH16O75309 829 aa16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 BTKQ06187 659 aa16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 VPS72Q15906 364 aa16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 PHF20Q9BVI0 1012 aa16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 ALDH8A1Q9H2A2 487 aaPredicted RBP16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 CAND2O75155 1236 aa16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 MAGEA9P43362 315 aa16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 CSTF3Q12996 717 aaKnown RBP16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 USP39Q53GS9 565 aaKnown RBP16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 C16orf62Q7Z3J2 963 aa16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 BLOC1S5Q8TDH9 187 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms