RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 FAM84AQ96KN4 292 aa8.83□□□□□ -1
MRPL55-211ENST00000366738 TSG101Q99816 390 aa8.83□□□□□ -1
MRPL55-211ENST00000366738 BPIFA3Q9BQP9 254 aa8.83□□□□□ -1
MRPL55-211ENST00000366738 MSTO1Q9BUK6 570 aa8.83□□□□□ -1
MRPL55-211ENST00000366738 RBSNQ9H1K0 784 aa8.83□□□□□ -1
MRPL55-211ENST00000366738 DMAC2Q9NW81 257 aa8.83□□□□□ -1
MRPL55-211ENST00000366738 DNMT3BQ9UBC3 853 aaKnown RBP8.83□□□□□ -1
MRPL55-211ENST00000366738 MTRRQ9UBK8 725 aa8.83□□□□□ -1
MRPL55-211ENST00000366738 MRPS17Q9Y2R5 130 aaKnown RBP8.83□□□□□ -1
MRPL55-211ENST00000366738 NFE2L3Q9Y4A8 694 aa8.83□□□□□ -1
MRPL55-211ENST00000366738 CDY1Q9Y6F8 540 aa8.83□□□□□ -1
MRPL55-211ENST00000366738 SMG1Q96Q15 3661 aaKnown RBP8.83□□□□□ -1
MRPL55-211ENST00000366738 TICRRQ7Z2Z1 1910 aa8.83□□□□□ -1
MRPL55-211ENST00000366738 IGSF10Q6WRI0 2623 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 C1QTNF9BB2RNN3 333 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 CLDN3O15551 220 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 ECI2O75521 394 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 B3GAT3O94766 335 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 C1QTNF9P0C862 333 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 CXCL8P10145 99 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 MCF2P10911 925 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 CEBPBP17676 345 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 GARTP22102 1010 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 FCARP24071 287 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 HOXC13P31276 330 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 GRM5P41594 1212 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 ACOT2P49753 483 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 NRLP54845 237 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 MYL5Q02045 173 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 GAS6Q14393 721 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 SF3A2Q15428 464 aaKnown RBP8.82□□□□□ -1
MRPL55-211ENST00000366738 CCDC6Q16204 474 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 DCAF4L1Q3SXM0 396 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 AASDHQ4L235 1098 aaPredicted RBP8.82□□□□□ -1
MRPL55-211ENST00000366738 SPATA1Q5VX52 437 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 CEP135Q66GS9 1140 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 HEATR6Q6AI08 1181 aaKnown RBP8.82□□□□□ -1
MRPL55-211ENST00000366738 TANGO2Q6ICL3 276 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.82□□□□□ -1
MRPL55-211ENST00000366738 IRF2BP1Q8IU81 584 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 SLC9A9Q8IVB4 645 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 CSGALNACT2Q8N6G5 542 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 RDH13Q8NBN7 331 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 ENOX1Q8TC92 643 aaKnown RBP8.82□□□□□ -1
MRPL55-211ENST00000366738 PLEKHO2Q8TD55 490 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 C18orf25Q96B23 403 aaPredicted RBP8.82□□□□□ -1
MRPL55-211ENST00000366738 ADPGKQ9BRR6 497 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 FAM213AQ9BRX8 229 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 TCHPQ9BT92 498 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 SRRTQ9BXP5 876 aaKnown RBP8.82□□□□□ -1
MRPL55-211ENST00000366738 RXFP3Q9NSD7 469 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 SAMSN1Q9NSI8 373 aaKnown RBP8.82□□□□□ -1
MRPL55-211ENST00000366738 AGO2Q9UKV8 859 aaKnown RBP8.82□□□□□ -1
MRPL55-211ENST00000366738 ZMIZ1Q9ULJ6 1067 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 MRPS23Q9Y3D9 190 aaKnown RBP8.82□□□□□ -1
MRPL55-211ENST00000366738 ANK1P16157 1881 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 SPAG17Q6Q759 2223 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 GREB1Q4ZG55 1949 aa8.82□□□□□ -1
MRPL55-211ENST00000366738 HELZ2Q9BYK8 2649 aaKnown RBP8.82□□□□□ -1
MRPL55-211ENST00000366738 DMXL2Q8TDJ6 3036 aa8.81□□□□□ -1
MRPL55-211ENST00000366738 WDR27A2RRH5 827 aa8.81□□□□□ -1
MRPL55-211ENST00000366738 OGTO15294 1046 aa8.81□□□□□ -1
MRPL55-211ENST00000366738 EXTL3O43909 919 aa8.81□□□□□ -1
MRPL55-211ENST00000366738 EXOC3O60645 756 aa8.81□□□□□ -1
MRPL55-211ENST00000366738 SEC24AO95486 1093 aa8.81□□□□□ -1
MRPL55-211ENST00000366738 ATP1A3P13637 1013 aa8.81□□□□□ -1
MRPL55-211ENST00000366738 HOXA9P31269 272 aa8.81□□□□□ -1
MRPL55-211ENST00000366738 CCR3P51677 355 aa8.81□□□□□ -1
MRPL55-211ENST00000366738 SNRPFP62306 86 aaKnown RBP8.81□□□□□ -1
MRPL55-211ENST00000366738 FKBP3Q00688 224 aaKnown RBP8.81□□□□□ -1
MRPL55-211ENST00000366738 ROR1Q01973 937 aa8.81□□□□□ -1
MRPL55-211ENST00000366738 ADAM9Q13443 819 aa8.81□□□□□ -1
MRPL55-211ENST00000366738 PPP2R5DQ14738 602 aa8.81□□□□□ -1
MRPL55-211ENST00000366738 SNRNP35Q16560 246 aaKnown RBP8.81□□□□□ -1
MRPL55-211ENST00000366738 CT47A1Q5JQC4 288 aaPredicted RBP8.81□□□□□ -1
MRPL55-211ENST00000366738 CDKAL1Q5VV42 579 aa8.81□□□□□ -1
MRPL55-211ENST00000366738 SLFN12LQ6IEE8 588 aa8.81□□□□□ -1
MRPL55-211ENST00000366738 FOXR2Q6PJQ5 311 aa8.81□□□□□ -1
MRPL55-211ENST00000366738 GPD1LQ8N335 351 aa8.81□□□□□ -1
MRPL55-211ENST00000366738 FAM160A2Q8N612 972 aaPredicted RBP8.81□□□□□ -1
MRPL55-211ENST00000366738 XXYLT1Q8NBI6 393 aa8.81□□□□□ -1
MRPL55-211ENST00000366738 GOLGA5Q8TBA6 731 aa8.81□□□□□ -1
MRPL55-211ENST00000366738 TMEM174Q8WUU8 243 aa8.81□□□□□ -1
MRPL55-211ENST00000366738 DDX1Q92499 740 aaKnown RBP8.81□□□□□ -1
MRPL55-211ENST00000366738 DNASE1L2Q92874 299 aa8.81□□□□□ -1
MRPL55-211ENST00000366738 CNOT6LQ96LI5 555 aaKnown RBP8.81□□□□□ -1
MRPL55-211ENST00000366738 NAT10Q9H0A0 1025 aaKnown RBP8.81□□□□□ -1
MRPL55-211ENST00000366738 BRD9Q9H8M2 597 aa8.81□□□□□ -1
MRPL55-211ENST00000366738 LMAN1LQ9HAT1 526 aa8.81□□□□□ -1
MRPL55-211ENST00000366738 FANCLQ9NW38 375 aa8.81□□□□□ -1
MRPL55-211ENST00000366738 C2orf42Q9NWW7 574 aa8.81□□□□□ -1
MRPL55-211ENST00000366738 CGNQ9P2M7 1197 aaKnown RBP8.81□□□□□ -1
MRPL55-211ENST00000366738 CPSF3Q9UKF6 684 aaKnown RBP8.81□□□□□ -1
MRPL55-211ENST00000366738 BACE2Q9Y5Z0 518 aa8.81□□□□□ -1
MRPL55-211ENST00000366738 PIAS3Q9Y6X2 628 aa8.81□□□□□ -1
MRPL55-211ENST00000366738 MAST4O15021 2626 aa8.81□□□□□ -1
MRPL55-211ENST00000366738 PDCD11Q14690 1871 aaKnown RBP8.81□□□□□ -1
MRPL55-211ENST00000366738 PTPRJQ12913 1337 aa8.8□□□□□ -1
MRPL55-211ENST00000366738 LAMA5O15230 3695 aa8.8□□□□□ -1
MRPL55-211ENST00000366738 K7ESF4 209 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms