RNA–Protein interactions for RNA: ENST00000363574.1

RNU6-1339P-201, Transcript of RNA, U6 small nuclear 1339, pseudogene, humanhuman

BASIC

Gene RNU6-1339P, Length 91 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1339P-201ENST00000363574 PRR5-ARHGAP8B1AHC4 643 aa5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 B9A039 149 aa5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 RFXAPO00287 272 aa5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 TRIM13O60858 407 aa5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 VPS4BO75351 444 aa5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 FAM155BO75949 473 aa5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 FCER1AP12319 257 aa5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 TPH1P17752 444 aa5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 ATICP31939 592 aa5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 MAN1A1P33908 653 aa5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 PTDSS1P48651 473 aaKnown RBP5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 IRAK1P51617 712 aa5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 CNGB1Q14028 1251 aaPredicted RBP5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 SLC5A9Q2M3M2 681 aa5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 EFCAB12Q6NXP0 572 aa5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 DRICH1Q6PGQ1 229 aaPredicted RBP5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 ATG14Q6ZNE5 492 aa5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 MED25Q71SY5 747 aa5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 KCTD20Q7Z5Y7 419 aa5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 GATAD2AQ86YP4 633 aa5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 CFAP52Q8N1V2 620 aa5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 SIMC1Q8NDZ2 872 aa5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 NUP133Q8WUM0 1156 aa5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 RILPL2Q969X0 211 aa5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 SLC46A1Q96NT5 459 aa5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 MOGAT1Q96PD6 335 aa5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 CPPED1Q9BRF8 314 aaPredicted RBP5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 TTYH3Q9C0H2 523 aa5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 SPON1Q9HCB6 807 aa5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 ZSCAN32Q9NX65 697 aa5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 HERC5Q9UII4 1024 aaKnown RBP5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 SMG5Q9UPR3 1016 aaKnown RBP5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 HDAC5Q9UQL6 1122 aa5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 MTO1Q9Y2Z2 717 aaKnown RBP5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 DTNAQ9Y4J8 743 aa5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 HS3ST4Q9Y661 456 aa5.34□□□□□ -1.55
RNU6-1339P-201ENST00000363574 TCAF2A6NFQ2 919 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 TISP43B9A030 160 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 FCHO1O14526 889 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 PCDH17O14917 1159 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 RRP9O43818 475 aaKnown RBP5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 CDC14BO60729 498 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 POLBP06746 335 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 ITGA2BP08514 1039 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 GYS1P13807 737 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 CR2P20023 1033 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 CNTFP26441 200 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 MST1P26927 711 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 AFF3P51826 1226 aaKnown RBP5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 CHN2P52757 468 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 G3BP1Q13283 466 aaKnown RBP eCLIP5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 KCNAB1Q14722 419 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 IQCB1Q15051 598 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 INSCQ1MX18 579 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 FAM110CQ1W6H9 321 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 ZNF750Q32MQ0 723 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 ZIK1Q3SY52 487 aaPredicted RBP5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 ZNF385BQ569K4 471 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 MFSD5Q6N075 450 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 MRNIPQ6NTE8 343 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 RETSATQ6NUM9 610 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 KLHL17Q6TDP4 642 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 MAATS1Q7Z4T9 603 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 LRRTM4Q86VH4 590 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 ZNF280BQ86YH2 543 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 TMTC1Q8IUR5 882 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 FTSJ3Q8IY81 847 aaKnown RBP5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 LINC01356Q8N9X3 169 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 OR52N2Q8NGI0 321 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 SMCR8Q8TEV9 937 aaPredicted RBP5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 ASB12Q8WXK4 309 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 RUBCNQ92622 972 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 NELFAQ9H3P2 528 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 CD320Q9NPF0 282 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 VSX1Q9NZR4 365 aaPredicted RBP5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 KIF17Q9P2E2 1029 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 IFT80Q9P2H3 777 aaPredicted RBP5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 DNMT3BQ9UBC3 853 aaKnown RBP5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 LPAR3Q9UBY5 353 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 CLCA2Q9UQC9 943 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 CDYLQ9Y232 598 aa5.33□□□□□ -1.56
RNU6-1339P-201ENST00000363574 POLRMTO00411 1230 aaKnown RBP5.32□□□□□ -1.56
RNU6-1339P-201ENST00000363574 USP1O94782 785 aa5.32□□□□□ -1.56
RNU6-1339P-201ENST00000363574 GLP2RO95838 553 aa5.32□□□□□ -1.56
RNU6-1339P-201ENST00000363574 GNAT2P19087 354 aa5.32□□□□□ -1.56
RNU6-1339P-201ENST00000363574 CHRM3P20309 590 aa5.32□□□□□ -1.56
RNU6-1339P-201ENST00000363574 GCSHP23434 173 aa5.32□□□□□ -1.56
RNU6-1339P-201ENST00000363574 CST5P28325 142 aaPredicted RBP5.32□□□□□ -1.56
RNU6-1339P-201ENST00000363574 POLE2P56282 527 aa5.32□□□□□ -1.56
RNU6-1339P-201ENST00000363574 NSUN2Q08J23 767 aaKnown RBP eCLIP5.32□□□□□ -1.56
RNU6-1339P-201ENST00000363574 KIAA2012Q0VF49 1180 aa5.32□□□□□ -1.56
RNU6-1339P-201ENST00000363574 VMACQ2NL98 169 aa5.32□□□□□ -1.56
RNU6-1339P-201ENST00000363574 TRIM71Q2Q1W2 868 aaKnown RBP5.32□□□□□ -1.56
RNU6-1339P-201ENST00000363574 FAXCQ5TGI0 409 aa5.32□□□□□ -1.56
RNU6-1339P-201ENST00000363574 TAPT1Q6NXT6 567 aa5.32□□□□□ -1.56
RNU6-1339P-201ENST00000363574 CPOQ8IVL8 374 aa5.32□□□□□ -1.56
RNU6-1339P-201ENST00000363574 HERC6Q8IVU3 1022 aa5.32□□□□□ -1.56
RNU6-1339P-201ENST00000363574 NSUN7Q8NE18 718 aaKnown RBP5.32□□□□□ -1.56
RNU6-1339P-201ENST00000363574 SLC30A5Q8TAD4 765 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms