RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 GPD2P43304 727 aa22.22■■□□□ 1.15
MAP1LC3A-201ENST00000360668 CCL23P55773 120 aa22.22■■□□□ 1.15
MAP1LC3A-201ENST00000360668 DSTYKQ6XUX3 929 aa22.22■■□□□ 1.15
MAP1LC3A-201ENST00000360668 RSRC2Q7L4I2 434 aaKnown RBP22.22■■□□□ 1.15
MAP1LC3A-201ENST00000360668 OSTM1Q86WC4 334 aa22.22■■□□□ 1.15
MAP1LC3A-201ENST00000360668 C12orf29Q8N999 325 aa22.22■■□□□ 1.15
MAP1LC3A-201ENST00000360668 SPATA18Q8TC71 538 aa22.22■■□□□ 1.15
MAP1LC3A-201ENST00000360668 TNIP3Q96KP6 325 aa22.22■■□□□ 1.15
MAP1LC3A-201ENST00000360668 PAAF1Q9BRP4 392 aa22.22■■□□□ 1.15
MAP1LC3A-201ENST00000360668 PARVAQ9NVD7 372 aa22.22■■□□□ 1.15
MAP1LC3A-201ENST00000360668 TSPAN16Q9UKR8 245 aa22.22■■□□□ 1.15
MAP1LC3A-201ENST00000360668 STRIP2Q9ULQ0 834 aa22.22■■□□□ 1.15
MAP1LC3A-201ENST00000360668 PCDHB7Q9Y5E2 793 aa22.22■■□□□ 1.15
MAP1LC3A-201ENST00000360668 SCN5AQ14524 2016 aa22.22■■□□□ 1.15
MAP1LC3A-201ENST00000360668 CES2O00748 559 aa22.21■■□□□ 1.15
MAP1LC3A-201ENST00000360668 IGFBP6P24592 240 aaPredicted RBP22.21■■□□□ 1.15
MAP1LC3A-201ENST00000360668 LMO2P25791 158 aa22.21■■□□□ 1.15
MAP1LC3A-201ENST00000360668 CYP2C18P33260 490 aa22.21■■□□□ 1.15
MAP1LC3A-201ENST00000360668 CKAP4Q07065 602 aaKnown RBP22.21■■□□□ 1.15
MAP1LC3A-201ENST00000360668 DSC1Q08554 894 aa22.21■■□□□ 1.15
MAP1LC3A-201ENST00000360668 MAMLD1Q13495 774 aa22.21■■□□□ 1.15
MAP1LC3A-201ENST00000360668 C2CD6Q53TS8 623 aa22.21■■□□□ 1.15
MAP1LC3A-201ENST00000360668 PPP1R26Q5T8A7 1209 aaPredicted RBP22.21■■□□□ 1.15
MAP1LC3A-201ENST00000360668 WSCD1Q658N2 575 aa22.21■■□□□ 1.15
MAP1LC3A-201ENST00000360668 DCLRE1AQ6PJP8 1040 aa22.21■■□□□ 1.15
MAP1LC3A-201ENST00000360668 HES6Q96HZ4 224 aa22.21■■□□□ 1.15
MAP1LC3A-201ENST00000360668 PAWRQ96IZ0 340 aaKnown RBP22.21■■□□□ 1.15
MAP1LC3A-201ENST00000360668 RPGRIP1Q96KN7 1286 aa22.21■■□□□ 1.15
MAP1LC3A-201ENST00000360668 DPEP3Q9H4B8 488 aa22.21■■□□□ 1.15
MAP1LC3A-201ENST00000360668 RNF216Q9NWF9 866 aaPredicted RBP22.21■■□□□ 1.15
MAP1LC3A-201ENST00000360668 CYTH4Q9UIA0 394 aa22.21■■□□□ 1.15
MAP1LC3A-201ENST00000360668 PACSIN2Q9UNF0 486 aaPredicted RBP22.21■■□□□ 1.15
MAP1LC3A-201ENST00000360668 ALG6Q9Y672 507 aa22.21■■□□□ 1.15
MAP1LC3A-201ENST00000360668 TET1Q8NFU7 2136 aa22.21■■□□□ 1.15
MAP1LC3A-201ENST00000360668 B3GAT3O94766 335 aa22.21■■□□□ 1.15
MAP1LC3A-201ENST00000360668 CLTBP09497 229 aa22.21■■□□□ 1.15
MAP1LC3A-201ENST00000360668 PDGFRBP09619 1106 aa22.21■■□□□ 1.15
MAP1LC3A-201ENST00000360668 SETSIPP0DME0 302 aa22.21■■□□□ 1.15
MAP1LC3A-201ENST00000360668 LHX1P48742 406 aa22.21■■□□□ 1.15
MAP1LC3A-201ENST00000360668 GSCP56915 257 aaPredicted RBP22.21■■□□□ 1.15
MAP1LC3A-201ENST00000360668 TCTN1Q2MV58 587 aa22.21■■□□□ 1.15
MAP1LC3A-201ENST00000360668 GOLGA7BQ2TAP0 167 aa22.21■■□□□ 1.15
MAP1LC3A-201ENST00000360668 PTPN20Q4JDL3 420 aa22.21■■□□□ 1.15
MAP1LC3A-201ENST00000360668 RABGGTAQ92696 567 aa22.21■■□□□ 1.15
MAP1LC3A-201ENST00000360668 TMEM39AQ9NV64 488 aa22.21■■□□□ 1.15
MAP1LC3A-201ENST00000360668 ANAPC7Q9UJX3 599 aa22.21■■□□□ 1.15
MAP1LC3A-201ENST00000360668 TCRBV5S1A1TA0A578 114 aa22.2■■□□□ 1.14
MAP1LC3A-201ENST00000360668 RFC2P35250 354 aa22.2■■□□□ 1.14
MAP1LC3A-201ENST00000360668 GABRB2P47870 512 aa22.2■■□□□ 1.14
MAP1LC3A-201ENST00000360668 MESDQ14696 234 aa22.2■■□□□ 1.14
MAP1LC3A-201ENST00000360668 ERCC6LQ2NKX8 1250 aa22.2■■□□□ 1.14
MAP1LC3A-201ENST00000360668 PKDCCQ504Y2 493 aa22.2■■□□□ 1.14
MAP1LC3A-201ENST00000360668 TIGD5Q53EQ6 642 aa22.2■■□□□ 1.14
MAP1LC3A-201ENST00000360668 CD300LGQ6UXG3 332 aa22.2■■□□□ 1.14
MAP1LC3A-201ENST00000360668 CREG2Q8IUH2 290 aa22.2■■□□□ 1.14
MAP1LC3A-201ENST00000360668 COG1Q8WTW3 980 aa22.2■■□□□ 1.14
MAP1LC3A-201ENST00000360668 RSPH1Q8WYR4 309 aa22.2■■□□□ 1.14
MAP1LC3A-201ENST00000360668 GOLGA1Q92805 767 aa22.2■■□□□ 1.14
MAP1LC3A-201ENST00000360668 WDR35Q9P2L0 1181 aa22.2■■□□□ 1.14
MAP1LC3A-201ENST00000360668 RNF14Q9UBS8 474 aa22.2■■□□□ 1.14
MAP1LC3A-201ENST00000360668 HESX1Q9UBX0 185 aa22.2■■□□□ 1.14
MAP1LC3A-201ENST00000360668 LRFN2Q9ULH4 789 aa22.2■■□□□ 1.14
MAP1LC3A-201ENST00000360668 ARHGEF37A1IGU5 675 aa22.19■■□□□ 1.14
MAP1LC3A-201ENST00000360668 ZNF185O15231 689 aa22.19■■□□□ 1.14
MAP1LC3A-201ENST00000360668 HOXA2O43364 376 aa22.19■■□□□ 1.14
MAP1LC3A-201ENST00000360668 HCRTO43612 131 aa22.19■■□□□ 1.14
MAP1LC3A-201ENST00000360668 ODC1P11926 461 aa22.19■■□□□ 1.14
MAP1LC3A-201ENST00000360668 TAP1Q03518 808 aa22.19■■□□□ 1.14
MAP1LC3A-201ENST00000360668 PDCLQ13371 301 aa22.19■■□□□ 1.14
MAP1LC3A-201ENST00000360668 LRRC26Q2I0M4 334 aa22.19■■□□□ 1.14
MAP1LC3A-201ENST00000360668 LLGL2Q6P1M3 1020 aa22.19■■□□□ 1.14
MAP1LC3A-201ENST00000360668 DNAJC24Q6P3W2 148 aa22.19■■□□□ 1.14
MAP1LC3A-201ENST00000360668 PHLDB2Q86SQ0 1253 aa22.19■■□□□ 1.14
MAP1LC3A-201ENST00000360668 GPR161Q8N6U8 529 aaKnown RBP22.19■■□□□ 1.14
MAP1LC3A-201ENST00000360668 B3GALNT2Q8NCR0 500 aa22.19■■□□□ 1.14
MAP1LC3A-201ENST00000360668 C3orf20Q8ND61 904 aa22.19■■□□□ 1.14
MAP1LC3A-201ENST00000360668 LRRN4CLQ8ND94 238 aa22.19■■□□□ 1.14
MAP1LC3A-201ENST00000360668 UBA3Q8TBC4 463 aa22.19■■□□□ 1.14
MAP1LC3A-201ENST00000360668 C18orf8Q96DM3 657 aa22.19■■□□□ 1.14
MAP1LC3A-201ENST00000360668 PBKQ96KB5 322 aa22.19■■□□□ 1.14
MAP1LC3A-201ENST00000360668 MIS12Q9H081 205 aa22.19■■□□□ 1.14
MAP1LC3A-201ENST00000360668 FAM49BQ9NUQ9 324 aa22.19■■□□□ 1.14
MAP1LC3A-201ENST00000360668 TBC1D13Q9NVG8 400 aa22.19■■□□□ 1.14
MAP1LC3A-201ENST00000360668 LCMT1Q9UIC8 334 aa22.19■■□□□ 1.14
MAP1LC3A-201ENST00000360668 DSEQ9UL01 958 aa22.19■■□□□ 1.14
MAP1LC3A-201ENST00000360668 PDE4DIPQ5VU43 2346 aa22.19■■□□□ 1.14
MAP1LC3A-201ENST00000360668 TTC3P53804 2025 aa22.19■■□□□ 1.14
MAP1LC3A-201ENST00000360668 CTAGE15A4D2H0 777 aa22.18■■□□□ 1.14
MAP1LC3A-201ENST00000360668 MIF4GDA9UHW6 222 aaKnown RBP22.18■■□□□ 1.14
MAP1LC3A-201ENST00000360668 TMEM189-UBE2V1I3L0A0 370 aa22.18■■□□□ 1.14
MAP1LC3A-201ENST00000360668 M0QZQ0 153 aa22.18■■□□□ 1.14
MAP1LC3A-201ENST00000360668 MYO1FO00160 1098 aa22.18■■□□□ 1.14
MAP1LC3A-201ENST00000360668 CYP11A1P05108 521 aa22.18■■□□□ 1.14
MAP1LC3A-201ENST00000360668 PFKMP08237 780 aa22.18■■□□□ 1.14
MAP1LC3A-201ENST00000360668 CTAGE8P0CG41 777 aa22.18■■□□□ 1.14
MAP1LC3A-201ENST00000360668 NAA30Q147X3 362 aaPredicted RBP22.18■■□□□ 1.14
MAP1LC3A-201ENST00000360668 NECAB2Q7Z6G3 386 aa22.18■■□□□ 1.14
MAP1LC3A-201ENST00000360668 CTAGE6Q86UF2 777 aa22.18■■□□□ 1.14
MAP1LC3A-201ENST00000360668 ZNF280BQ86YH2 543 aa22.18■■□□□ 1.14
MAP1LC3A-201ENST00000360668 CTAGE4Q8IX94 777 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms