RNA–Protein interactions for RNA: ENST00000359454.10

CCDC196-201, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,083 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-201ENST00000359454 PDZD4Q76G19 769 aaPredicted RBP6.94□□□□□ -1.3
CCDC196-201ENST00000359454 MAEAQ7L5Y9 396 aa6.94□□□□□ -1.3
CCDC196-201ENST00000359454 APBB1IPQ7Z5R6 666 aaPredicted RBP6.94□□□□□ -1.3
CCDC196-201ENST00000359454 SKAP1Q86WV1 359 aa6.94□□□□□ -1.3
CCDC196-201ENST00000359454 MAP4K3Q8IVH8 894 aa6.94□□□□□ -1.3
CCDC196-201ENST00000359454 NOSTRINQ8IVI9 506 aa6.94□□□□□ -1.3
CCDC196-201ENST00000359454 TCEAL8Q8IYN2 117 aa6.94□□□□□ -1.3
CCDC196-201ENST00000359454 PIGOQ8TEQ8 1089 aa6.94□□□□□ -1.3
CCDC196-201ENST00000359454 DEPDC1BQ8WUY9 529 aa6.94□□□□□ -1.3
CCDC196-201ENST00000359454 DDX1Q92499 740 aaKnown RBP6.94□□□□□ -1.3
CCDC196-201ENST00000359454 PNMA5Q96PV4 448 aa6.94□□□□□ -1.3
CCDC196-201ENST00000359454 PPP1R10Q96QC0 940 aaKnown RBP6.94□□□□□ -1.3
CCDC196-201ENST00000359454 SLC30A3Q99726 388 aa6.94□□□□□ -1.3
CCDC196-201ENST00000359454 CORO1BQ9BR76 489 aa6.94□□□□□ -1.3
CCDC196-201ENST00000359454 KRTAP4-6Q9BYQ5 205 aa6.94□□□□□ -1.3
CCDC196-201ENST00000359454 TM6SF1Q9BZW5 370 aa6.94□□□□□ -1.3
CCDC196-201ENST00000359454 CXCL16Q9H2A7 254 aa6.94□□□□□ -1.3
CCDC196-201ENST00000359454 TTC12Q9H892 705 aaPredicted RBP6.94□□□□□ -1.3
CCDC196-201ENST00000359454 ZNF334Q9HCZ1 680 aaPredicted RBP6.94□□□□□ -1.3
CCDC196-201ENST00000359454 GPRC5CQ9NQ84 441 aa6.94□□□□□ -1.3
CCDC196-201ENST00000359454 SEMA4GQ9NTN9 838 aa6.94□□□□□ -1.3
CCDC196-201ENST00000359454 GDAQ9Y2T3 454 aa6.94□□□□□ -1.3
CCDC196-201ENST00000359454 KMT2BQ9UMN6 2715 aaPredicted RBP6.93□□□□□ -1.3
CCDC196-201ENST00000359454 DOCK6Q96HP0 2047 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 NOTCH4Q99466 2003 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 A0A087WWV3 80 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 WDR27A2RRH5 827 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 H7C4K7 107 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 I3L4J1 428 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 ZNF263O14978 683 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 EPB41L2O43491 1005 aaKnown RBP6.93□□□□□ -1.3
CCDC196-201ENST00000359454 PAPSS2O95340 614 aaPredicted RBP6.93□□□□□ -1.3
CCDC196-201ENST00000359454 CHRNB1P11230 501 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 ATF2P15336 505 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 ATP2B1P20020 1258 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 GDI1P31150 447 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 KRT2P35908 639 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 TXKP42681 527 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 NAMPTP43490 491 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 CLCNKBP51801 687 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 SATB1Q01826 763 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 ROR1Q01973 937 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 LRRC32Q14392 662 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 BECN1Q14457 450 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 PPP2R5AQ15172 486 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 UPP1Q16831 310 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 EARS2Q5JPH6 523 aaKnown RBP6.93□□□□□ -1.3
CCDC196-201ENST00000359454 RNFT1Q5M7Z0 435 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 EEF1DP3Q658K8 133 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 IQCEQ6IPM2 695 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 CD300LGQ6UXG3 332 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 VITQ6UXI7 678 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 PRR23CQ6ZRP0 262 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.93□□□□□ -1.3
CCDC196-201ENST00000359454 LONP2Q86WA8 852 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 ELMOD1Q8N336 334 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 SPEM1Q8N4L4 309 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 LEMD2Q8NC56 503 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 DEPTORQ8TB45 409 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 WASF1Q92558 559 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 SMARCD2Q92925 531 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 E2F7Q96AV8 911 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 TCEAL4Q96EI5 215 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 MSANTD3Q96H12 275 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 ASB16Q96NS5 453 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 NACC1Q96RE7 527 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 CITED4Q96RK1 184 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 GSX2Q9BZM3 304 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 CCDC113Q9H0I3 377 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 TRPV4Q9HBA0 871 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 CYP4F11Q9HBI6 524 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 BRMS1Q9HCU9 246 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 TUFT1Q9NNX1 390 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 GJB4Q9NTQ9 266 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 PDRG1Q9NUG6 133 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 MAFFQ9ULX9 164 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 PIAS3Q9Y6X2 628 aa6.93□□□□□ -1.3
CCDC196-201ENST00000359454 VWA8A3KMH1 1905 aa6.92□□□□□ -1.3
CCDC196-201ENST00000359454 SMIM28A0A1B0GU29 152 aa6.92□□□□□ -1.3
CCDC196-201ENST00000359454 CHURC1-FNTBB4DL54 471 aa6.92□□□□□ -1.3
CCDC196-201ENST00000359454 SYN3O14994 580 aa6.92□□□□□ -1.3
CCDC196-201ENST00000359454 NEMFO60524 1076 aa6.92□□□□□ -1.3
CCDC196-201ENST00000359454 SEC24AO95486 1093 aa6.92□□□□□ -1.3
CCDC196-201ENST00000359454 SPATA31C1P0DKV0 1188 aa6.92□□□□□ -1.3
CCDC196-201ENST00000359454 LIG1P18858 919 aa6.92□□□□□ -1.3
CCDC196-201ENST00000359454 CYP11B2P19099 503 aa6.92□□□□□ -1.3
CCDC196-201ENST00000359454 IGFBP6P24592 240 aaPredicted RBP6.92□□□□□ -1.3
CCDC196-201ENST00000359454 CCNE1P24864 410 aa6.92□□□□□ -1.3
CCDC196-201ENST00000359454 CCR2P41597 374 aa6.92□□□□□ -1.3
CCDC196-201ENST00000359454 MAP2K3P46734 347 aa6.92□□□□□ -1.3
CCDC196-201ENST00000359454 BRCC3P46736 316 aa6.92□□□□□ -1.3
CCDC196-201ENST00000359454 FNTBP49356 437 aa6.92□□□□□ -1.3
CCDC196-201ENST00000359454 EFNA5P52803 228 aa6.92□□□□□ -1.3
CCDC196-201ENST00000359454 LIMK1P53667 647 aa6.92□□□□□ -1.3
CCDC196-201ENST00000359454 YARSP54577 528 aaKnown RBP6.92□□□□□ -1.3
CCDC196-201ENST00000359454 ARPP19P56211 112 aa6.92□□□□□ -1.3
CCDC196-201ENST00000359454 EHHADHQ08426 723 aa6.92□□□□□ -1.3
CCDC196-201ENST00000359454 SCRN1Q12765 414 aa6.92□□□□□ -1.3
CCDC196-201ENST00000359454 GLRA4Q5JXX5 417 aa6.92□□□□□ -1.3
CCDC196-201ENST00000359454 DGKKQ5KSL6 1271 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms