RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 GNGT1P63211 74 aa15.74■□□□□ 0.11
GABPB1-202ENST00000359031 CAV1Q03135 178 aa15.74■□□□□ 0.11
GABPB1-202ENST00000359031 IFFO1Q0D2I5 559 aa15.74■□□□□ 0.11
GABPB1-202ENST00000359031 INCA1Q0VD86 236 aa15.74■□□□□ 0.11
GABPB1-202ENST00000359031 NFX1Q12986 1120 aaKnown RBP15.74■□□□□ 0.11
GABPB1-202ENST00000359031 KCTD19Q17RG1 926 aaPredicted RBP15.74■□□□□ 0.11
GABPB1-202ENST00000359031 TMEM176AQ96HP8 235 aa15.74■□□□□ 0.11
GABPB1-202ENST00000359031 SLITRK1Q96PX8 696 aa15.74■□□□□ 0.11
GABPB1-202ENST00000359031 GCOM2Q9BZD3 368 aaPredicted RBP15.74■□□□□ 0.11
GABPB1-202ENST00000359031 TSPYL1Q9H0U9 437 aa15.74■□□□□ 0.11
GABPB1-202ENST00000359031 EPB41L4BQ9H329 900 aa15.74■□□□□ 0.11
GABPB1-202ENST00000359031 PLEKHA5Q9HAU0 1116 aa15.74■□□□□ 0.11
GABPB1-202ENST00000359031 ASIC3Q9UHC3 531 aa15.74■□□□□ 0.11
GABPB1-202ENST00000359031 GRIN2DO15399 1336 aa15.73■□□□□ 0.11
GABPB1-202ENST00000359031 A6NJR5 290 aa15.73■□□□□ 0.11
GABPB1-202ENST00000359031 SIGLEC16A6NMB1 481 aa15.73■□□□□ 0.11
GABPB1-202ENST00000359031 ALDH1A1P00352 501 aa15.73■□□□□ 0.11
GABPB1-202ENST00000359031 VDRP11473 427 aa15.73■□□□□ 0.11
GABPB1-202ENST00000359031 RARGP13631 454 aa15.73■□□□□ 0.11
GABPB1-202ENST00000359031 CDH8P55286 799 aa15.73■□□□□ 0.11
GABPB1-202ENST00000359031 HNRNPH2P55795 449 aaKnown RBP15.73■□□□□ 0.11
GABPB1-202ENST00000359031 OGDHQ02218 1023 aa15.73■□□□□ 0.11
GABPB1-202ENST00000359031 SNX1Q13596 522 aa15.73■□□□□ 0.11
GABPB1-202ENST00000359031 KRT71Q3SY84 523 aa15.73■□□□□ 0.11
GABPB1-202ENST00000359031 MORN1Q5T089 497 aa15.73■□□□□ 0.11
GABPB1-202ENST00000359031 CYP4A22Q5TCH4 519 aa15.73■□□□□ 0.11
GABPB1-202ENST00000359031 POLNQ7Z5Q5 900 aa15.73■□□□□ 0.11
GABPB1-202ENST00000359031 BBOF1Q8ND07 529 aa15.73■□□□□ 0.11
GABPB1-202ENST00000359031 ATG4AQ8WYN0 398 aa15.73■□□□□ 0.11
GABPB1-202ENST00000359031 CCDC114Q96M63 670 aa15.73■□□□□ 0.11
GABPB1-202ENST00000359031 ELOVL4Q9GZR5 314 aa15.73■□□□□ 0.11
GABPB1-202ENST00000359031 ADAMTS10Q9H324 1103 aa15.73■□□□□ 0.11
GABPB1-202ENST00000359031 DPP3Q9NY33 737 aa15.73■□□□□ 0.11
GABPB1-202ENST00000359031 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.73■□□□□ 0.11
GABPB1-202ENST00000359031 AGAP1Q9UPQ3 857 aa15.73■□□□□ 0.11
GABPB1-202ENST00000359031 R3HDM2Q9Y2K5 976 aaKnown RBP15.73■□□□□ 0.11
GABPB1-202ENST00000359031 TRIM17Q9Y577 477 aa15.73■□□□□ 0.11
GABPB1-202ENST00000359031 NRCAMQ92823 1304 aa15.73■□□□□ 0.11
GABPB1-202ENST00000359031 SMIM35A0A1B0GVV1 85 aa15.72■□□□□ 0.11
GABPB1-202ENST00000359031 ADCY6O43306 1168 aa15.72■□□□□ 0.11
GABPB1-202ENST00000359031 TJP3O95049 919 aa15.72■□□□□ 0.11
GABPB1-202ENST00000359031 HMGCRP04035 888 aa15.72■□□□□ 0.11
GABPB1-202ENST00000359031 SMIM10L2AP0DMW4 78 aa15.72■□□□□ 0.11
GABPB1-202ENST00000359031 SMIM10L2BP0DMW5 78 aa15.72■□□□□ 0.11
GABPB1-202ENST00000359031 ATF2P15336 505 aa15.72■□□□□ 0.11
GABPB1-202ENST00000359031 LMNB2Q03252 620 aa15.72■□□□□ 0.11
GABPB1-202ENST00000359031 MAP2K5Q13163 448 aa15.72■□□□□ 0.11
GABPB1-202ENST00000359031 LLGL1Q15334 1064 aa15.72■□□□□ 0.11
GABPB1-202ENST00000359031 DNAJC21Q5F1R6 531 aaKnown RBP15.72■□□□□ 0.11
GABPB1-202ENST00000359031 DRICH1Q6PGQ1 229 aaPredicted RBP15.72■□□□□ 0.11
GABPB1-202ENST00000359031 RHBDF2Q6PJF5 856 aa15.72■□□□□ 0.11
GABPB1-202ENST00000359031 KIF12Q96FN5 646 aa15.72■□□□□ 0.11
GABPB1-202ENST00000359031 TWNKQ96RR1 684 aa15.72■□□□□ 0.11
GABPB1-202ENST00000359031 CENPHQ9H3R5 247 aa15.72■□□□□ 0.11
GABPB1-202ENST00000359031 KIAA1257Q9ULG3 409 aa15.72■□□□□ 0.11
GABPB1-202ENST00000359031 BARX2Q9UMQ3 279 aaPredicted RBP15.72■□□□□ 0.11
GABPB1-202ENST00000359031 GNEQ9Y223 722 aaKnown RBP15.72■□□□□ 0.11
GABPB1-202ENST00000359031 MBLAC1A4D2B0 266 aaPredicted RBP15.72■□□□□ 0.11
GABPB1-202ENST00000359031 SRRM3A6NNA2 597 aaPredicted RBP15.72■□□□□ 0.11
GABPB1-202ENST00000359031 MICAL2O94851 1124 aa15.72■□□□□ 0.11
GABPB1-202ENST00000359031 PSMA2P25787 234 aa15.72■□□□□ 0.11
GABPB1-202ENST00000359031 PSMC1P62191 440 aaKnown RBP15.72■□□□□ 0.11
GABPB1-202ENST00000359031 ZNF268Q14587 947 aaPredicted RBP15.72■□□□□ 0.11
GABPB1-202ENST00000359031 CNGA2Q16280 664 aa15.72■□□□□ 0.11
GABPB1-202ENST00000359031 ODF2Q5BJF6 829 aa15.72■□□□□ 0.11
GABPB1-202ENST00000359031 SLC27A1Q6PCB7 646 aa15.72■□□□□ 0.11
GABPB1-202ENST00000359031 SPOCD1Q6ZMY3 1216 aa15.72■□□□□ 0.11
GABPB1-202ENST00000359031 TRMT10CQ7L0Y3 403 aaKnown RBP15.72■□□□□ 0.11
GABPB1-202ENST00000359031 CCDC89Q8N998 374 aa15.72■□□□□ 0.11
GABPB1-202ENST00000359031 CCHCR1Q8TD31 782 aa15.72■□□□□ 0.11
GABPB1-202ENST00000359031 RNF25Q96BH1 459 aaPredicted RBP15.72■□□□□ 0.11
GABPB1-202ENST00000359031 TMEM109Q9BVC6 243 aa15.72■□□□□ 0.11
GABPB1-202ENST00000359031 HEMGNQ9BXL5 484 aa15.72■□□□□ 0.11
GABPB1-202ENST00000359031 SETD4Q9NVD3 440 aa15.72■□□□□ 0.11
GABPB1-202ENST00000359031 HMGXB4Q9UGU5 601 aa15.72■□□□□ 0.11
GABPB1-202ENST00000359031 CYTH4Q9UIA0 394 aa15.72■□□□□ 0.11
GABPB1-202ENST00000359031 NEU2Q9Y3R4 380 aa15.72■□□□□ 0.11
GABPB1-202ENST00000359031 F8VP50 259 aa15.71■□□□□ 0.11
GABPB1-202ENST00000359031 M0QYV0 167 aa15.71■□□□□ 0.11
GABPB1-202ENST00000359031 NPTXRO95502 500 aa15.71■□□□□ 0.11
GABPB1-202ENST00000359031 KRT3P12035 628 aa15.71■□□□□ 0.11
GABPB1-202ENST00000359031 GABRB2P47870 512 aa15.71■□□□□ 0.11
GABPB1-202ENST00000359031 ATP1A2P50993 1020 aa15.71■□□□□ 0.11
GABPB1-202ENST00000359031 MYO1EQ12965 1108 aa15.71■□□□□ 0.11
GABPB1-202ENST00000359031 STILQ15468 1287 aa15.71■□□□□ 0.11
GABPB1-202ENST00000359031 KIZQ2M2Z5 673 aa15.71■□□□□ 0.11
GABPB1-202ENST00000359031 HABP4Q5JVS0 413 aaKnown RBP15.71■□□□□ 0.11
GABPB1-202ENST00000359031 ZFYVE27Q5T4F4 411 aa15.71■□□□□ 0.11
GABPB1-202ENST00000359031 NOTUMQ6P988 496 aa15.71■□□□□ 0.11
GABPB1-202ENST00000359031 ZNF365Q70YC5 407 aa15.71■□□□□ 0.11
GABPB1-202ENST00000359031 CATSPER4Q7RTX7 472 aa15.71■□□□□ 0.11
GABPB1-202ENST00000359031 TLK2Q86UE8 772 aa15.71■□□□□ 0.11
GABPB1-202ENST00000359031 XYLT1Q86Y38 959 aa15.71■□□□□ 0.11
GABPB1-202ENST00000359031 SNX27Q96L92 541 aa15.71■□□□□ 0.11
GABPB1-202ENST00000359031 TRAIPQ9BWF2 469 aa15.71■□□□□ 0.11
GABPB1-202ENST00000359031 CFHR5Q9BXR6 569 aa15.71■□□□□ 0.11
GABPB1-202ENST00000359031 MIS12Q9H081 205 aa15.71■□□□□ 0.11
GABPB1-202ENST00000359031 SYNCQ9H7C4 482 aa15.71■□□□□ 0.11
GABPB1-202ENST00000359031 KLHL11Q9NVR0 708 aa15.71■□□□□ 0.11
GABPB1-202ENST00000359031 GOLGA8SH3BPF8 625 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms