RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 UBAP2LQ14157 1087 aaKnown RBP11.98□□□□□ -0.49
CNOT3-202ENST00000358389 NADK2Q4G0N4 442 aa11.98□□□□□ -0.49
CNOT3-202ENST00000358389 PASD1Q8IV76 773 aa11.98□□□□□ -0.49
CNOT3-202ENST00000358389 ZNF34Q8IZ26 560 aa11.98□□□□□ -0.49
CNOT3-202ENST00000358389 ACSF2Q96CM8 615 aaPredicted RBP11.98□□□□□ -0.49
CNOT3-202ENST00000358389 HERPUD2Q9BSE4 406 aa11.98□□□□□ -0.49
CNOT3-202ENST00000358389 WWP1Q9H0M0 922 aa11.98□□□□□ -0.49
CNOT3-202ENST00000358389 KIF13AQ9H1H9 1805 aa11.98□□□□□ -0.49
CNOT3-202ENST00000358389 TRIM43BA6NCK2 446 aa11.98□□□□□ -0.49
CNOT3-202ENST00000358389 F8W8V4 182 aa11.98□□□□□ -0.49
CNOT3-202ENST00000358389 K7ENM7 598 aa11.98□□□□□ -0.49
CNOT3-202ENST00000358389 GDF11O95390 407 aa11.98□□□□□ -0.49
CNOT3-202ENST00000358389 NCF2P19878 526 aaPredicted RBP11.98□□□□□ -0.49
CNOT3-202ENST00000358389 CRABP2P29373 138 aa11.98□□□□□ -0.49
CNOT3-202ENST00000358389 LMNB2Q03252 620 aa11.98□□□□□ -0.49
CNOT3-202ENST00000358389 TREML1Q86YW5 311 aa11.98□□□□□ -0.49
CNOT3-202ENST00000358389 CRLF3Q8IUI8 442 aa11.98□□□□□ -0.49
CNOT3-202ENST00000358389 ETNPPLQ8TBG4 499 aa11.98□□□□□ -0.49
CNOT3-202ENST00000358389 PRR5-ARHGAP8B1AHC4 643 aa11.98□□□□□ -0.49
CNOT3-202ENST00000358389 TCP10L2B9ZVM9 353 aa11.98□□□□□ -0.49
CNOT3-202ENST00000358389 ZBTB39O15060 712 aa11.98□□□□□ -0.49
CNOT3-202ENST00000358389 STRNO43815 780 aa11.98□□□□□ -0.49
CNOT3-202ENST00000358389 EIF4BP23588 611 aaKnown RBP11.98□□□□□ -0.49
CNOT3-202ENST00000358389 ARHGAP8P85298 464 aa11.98□□□□□ -0.49
CNOT3-202ENST00000358389 C12orf50Q8NA57 414 aaPredicted RBP11.98□□□□□ -0.49
CNOT3-202ENST00000358389 GLIS1Q8NBF1 620 aa11.98□□□□□ -0.49
CNOT3-202ENST00000358389 TRIM56Q9BRZ2 755 aaKnown RBP11.98□□□□□ -0.49
CNOT3-202ENST00000358389 MECRQ9BV79 373 aa11.98□□□□□ -0.49
CNOT3-202ENST00000358389 S100A14Q9HCY8 104 aa11.98□□□□□ -0.49
CNOT3-202ENST00000358389 AGPAT3Q9NRZ7 376 aa11.98□□□□□ -0.49
CNOT3-202ENST00000358389 RAB20Q9NX57 234 aa11.98□□□□□ -0.49
CNOT3-202ENST00000358389 CIDEBQ9UHD4 219 aa11.98□□□□□ -0.49
CNOT3-202ENST00000358389 NCKAP1LP55160 1127 aa11.97□□□□□ -0.49
CNOT3-202ENST00000358389 LRGUKQ96M69 825 aa11.97□□□□□ -0.49
CNOT3-202ENST00000358389 APOL6Q9BWW8 343 aa11.97□□□□□ -0.49
CNOT3-202ENST00000358389 C10orf88Q9H8K7 445 aa11.97□□□□□ -0.49
CNOT3-202ENST00000358389 DNPEPQ9ULA0 475 aa11.97□□□□□ -0.49
CNOT3-202ENST00000358389 TISP43B9A030 160 aa11.97□□□□□ -0.49
CNOT3-202ENST00000358389 TP73O15350 636 aa11.97□□□□□ -0.49
CNOT3-202ENST00000358389 C6orf222P0C671 652 aaPredicted RBP11.97□□□□□ -0.49
CNOT3-202ENST00000358389 GAP43P17677 238 aa11.97□□□□□ -0.49
CNOT3-202ENST00000358389 NSFP46459 744 aaKnown RBP11.97□□□□□ -0.49
CNOT3-202ENST00000358389 VAMP7P51809 220 aa11.97□□□□□ -0.49
CNOT3-202ENST00000358389 MFAP3P55082 362 aa11.97□□□□□ -0.49
CNOT3-202ENST00000358389 MAP3K10Q02779 954 aa11.97□□□□□ -0.49
CNOT3-202ENST00000358389 ANKRD20A4Q4UJ75 823 aa11.97□□□□□ -0.49
CNOT3-202ENST00000358389 FBXO11Q86XK2 927 aa11.97□□□□□ -0.49
CNOT3-202ENST00000358389 ATP11CQ8NB49 1132 aa11.97□□□□□ -0.49
CNOT3-202ENST00000358389 NEDD1Q8NHV4 660 aa11.97□□□□□ -0.49
CNOT3-202ENST00000358389 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.97□□□□□ -0.49
CNOT3-202ENST00000358389 EPS8L1Q8TE68 723 aa11.97□□□□□ -0.49
CNOT3-202ENST00000358389 NCSTNQ92542 709 aa11.97□□□□□ -0.49
CNOT3-202ENST00000358389 ERLEC1Q96DZ1 483 aa11.97□□□□□ -0.49
CNOT3-202ENST00000358389 C11orf70Q9BRQ4 267 aa11.97□□□□□ -0.49
CNOT3-202ENST00000358389 LIN28AQ9H9Z2 209 aaKnown RBP11.97□□□□□ -0.49
CNOT3-202ENST00000358389 THEGQ9P2T0 379 aa11.97□□□□□ -0.49
CNOT3-202ENST00000358389 MAGEC1O60732 1142 aa11.97□□□□□ -0.49
CNOT3-202ENST00000358389 KRT1P04264 644 aa11.97□□□□□ -0.49
CNOT3-202ENST00000358389 BASP1P80723 227 aaKnown RBP11.97□□□□□ -0.49
CNOT3-202ENST00000358389 PTK7Q13308 1070 aa11.97□□□□□ -0.49
CNOT3-202ENST00000358389 PPP2R5DQ14738 602 aa11.97□□□□□ -0.49
CNOT3-202ENST00000358389 CHI3L2Q15782 390 aa11.97□□□□□ -0.49
CNOT3-202ENST00000358389 NUDCD3Q8IVD9 361 aa11.97□□□□□ -0.49
CNOT3-202ENST00000358389 DHX38Q92620 1227 aaKnown RBP11.97□□□□□ -0.49
CNOT3-202ENST00000358389 GPR88Q9GZN0 384 aa11.97□□□□□ -0.49
CNOT3-202ENST00000358389 VPS11Q9H270 941 aa11.97□□□□□ -0.49
CNOT3-202ENST00000358389 ZNF395Q9H8N7 513 aaPredicted RBP11.97□□□□□ -0.49
CNOT3-202ENST00000358389 DBNDD1Q9H9R9 158 aa11.97□□□□□ -0.49
CNOT3-202ENST00000358389 DDX43Q9NXZ2 648 aaKnown RBP11.97□□□□□ -0.49
CNOT3-202ENST00000358389 ERVV-1B6SEH8 477 aa11.96□□□□□ -0.49
CNOT3-202ENST00000358389 NAA20P61599 178 aa11.96□□□□□ -0.49
CNOT3-202ENST00000358389 ITGA9Q13797 1035 aa11.96□□□□□ -0.49
CNOT3-202ENST00000358389 SEPT6Q14141 434 aa11.96□□□□□ -0.49
CNOT3-202ENST00000358389 PDSS2Q86YH6 399 aa11.96□□□□□ -0.49
CNOT3-202ENST00000358389 GLT8D2Q9H1C3 349 aa11.96□□□□□ -0.49
CNOT3-202ENST00000358389 HSFX1Q9UBD0 423 aa11.96□□□□□ -0.49
CNOT3-202ENST00000358389 SLC24A2Q9UI40 661 aa11.96□□□□□ -0.49
CNOT3-202ENST00000358389 SERPINB13Q9UIV8 391 aa11.96□□□□□ -0.49
CNOT3-202ENST00000358389 COMMD10Q9Y6G5 202 aa11.96□□□□□ -0.49
CNOT3-202ENST00000358389 DDX60Q8IY21 1712 aaKnown RBP11.96□□□□□ -0.49
CNOT3-202ENST00000358389 IQANK1A0A1B0GTG1 560 aa11.96□□□□□ -0.49
CNOT3-202ENST00000358389 CLRN2A0PK11 232 aa11.96□□□□□ -0.49
CNOT3-202ENST00000358389 DNALI1O14645 258 aaPredicted RBP11.96□□□□□ -0.49
CNOT3-202ENST00000358389 TYROBPO43914 113 aa11.96□□□□□ -0.49
CNOT3-202ENST00000358389 PROCP04070 461 aa11.96□□□□□ -0.49
CNOT3-202ENST00000358389 ABHD2P08910 425 aa11.96□□□□□ -0.49
CNOT3-202ENST00000358389 SRGAP2CP0DJJ0 459 aa11.96□□□□□ -0.49
CNOT3-202ENST00000358389 SRGAP2BP0DMP2 458 aa11.96□□□□□ -0.49
CNOT3-202ENST00000358389 CENPCQ03188 943 aa11.96□□□□□ -0.49
CNOT3-202ENST00000358389 KRT72Q14CN4 511 aa11.96□□□□□ -0.49
CNOT3-202ENST00000358389 CCNG2Q16589 344 aa11.96□□□□□ -0.49
CNOT3-202ENST00000358389 RALGPS1Q5JS13 557 aa11.96□□□□□ -0.49
CNOT3-202ENST00000358389 PAOXQ6QHF9 649 aa11.96□□□□□ -0.49
CNOT3-202ENST00000358389 PATL1Q86TB9 770 aaKnown RBP11.96□□□□□ -0.49
CNOT3-202ENST00000358389 PPM1NQ8N819 430 aa11.96□□□□□ -0.49
CNOT3-202ENST00000358389 ABHD8Q96I13 439 aa11.96□□□□□ -0.49
CNOT3-202ENST00000358389 ZNF408Q9H9D4 720 aa11.96□□□□□ -0.49
CNOT3-202ENST00000358389 JMJD4Q9H9V9 463 aa11.96□□□□□ -0.49
CNOT3-202ENST00000358389 SOX13Q9UN79 622 aa11.96□□□□□ -0.49
CNOT3-202ENST00000358389 INPP5FQ9Y2H2 1132 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms