RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 PTPN1P18031 435 aaKnown RBP16.22■□□□□ 0.19
TPM1-206ENST00000358278 STAT1P42224 750 aa16.22■□□□□ 0.19
TPM1-206ENST00000358278 JAM2P57087 298 aa16.22■□□□□ 0.19
TPM1-206ENST00000358278 MAPRE1Q15691 268 aaKnown RBP16.22■□□□□ 0.19
TPM1-206ENST00000358278 MDH1BQ5I0G3 518 aa16.22■□□□□ 0.19
TPM1-206ENST00000358278 SLC4A11Q8NBS3 891 aa16.22■□□□□ 0.19
TPM1-206ENST00000358278 ZNF397Q8NF99 534 aaPredicted RBP16.22■□□□□ 0.19
TPM1-206ENST00000358278 HEXIM2Q96MH2 286 aaKnown RBP16.22■□□□□ 0.19
TPM1-206ENST00000358278 KLHL5Q96PQ7 755 aa16.22■□□□□ 0.19
TPM1-206ENST00000358278 EDEM3Q9BZQ6 932 aa16.22■□□□□ 0.19
TPM1-206ENST00000358278 GTF3C4Q9UKN8 822 aa16.22■□□□□ 0.19
TPM1-206ENST00000358278 BRWD1Q9NSI6 2320 aa16.22■□□□□ 0.19
TPM1-206ENST00000358278 A0A1W2PQJ5 194 aa16.22■□□□□ 0.19
TPM1-206ENST00000358278 WDR27A2RRH5 827 aa16.22■□□□□ 0.19
TPM1-206ENST00000358278 CYP26A1O43174 497 aa16.22■□□□□ 0.19
TPM1-206ENST00000358278 PAEPP09466 180 aa16.22■□□□□ 0.19
TPM1-206ENST00000358278 CD19P15391 556 aa16.22■□□□□ 0.19
TPM1-206ENST00000358278 IGFBP4P22692 258 aa16.22■□□□□ 0.19
TPM1-206ENST00000358278 SOX5P35711 763 aa16.22■□□□□ 0.19
TPM1-206ENST00000358278 CDR1P51861 262 aa16.22■□□□□ 0.19
TPM1-206ENST00000358278 ZNF132P52740 706 aa16.22■□□□□ 0.19
TPM1-206ENST00000358278 CYP27A1Q02318 531 aa16.22■□□□□ 0.19
TPM1-206ENST00000358278 Q7L0L9 218 aa16.22■□□□□ 0.19
TPM1-206ENST00000358278 ADGRD2Q7Z7M1 963 aa16.22■□□□□ 0.19
TPM1-206ENST00000358278 RBM23Q86U06 439 aaKnown RBP16.22■□□□□ 0.19
TPM1-206ENST00000358278 PALB2Q86YC2 1186 aa16.22■□□□□ 0.19
TPM1-206ENST00000358278 FAM71AQ8IYT1 594 aa16.22■□□□□ 0.19
TPM1-206ENST00000358278 CRYBG2Q8N1P7 616 aa16.22■□□□□ 0.19
TPM1-206ENST00000358278 MYCBPAPQ8TBZ2 947 aa16.22■□□□□ 0.19
TPM1-206ENST00000358278 PGLYRP2Q96PD5 576 aa16.22■□□□□ 0.19
TPM1-206ENST00000358278 NSUN3Q9H649 340 aaKnown RBP16.22■□□□□ 0.19
TPM1-206ENST00000358278 TLE6Q9H808 572 aa16.22■□□□□ 0.19
TPM1-206ENST00000358278 CRTAC1Q9NQ79 661 aa16.22■□□□□ 0.19
TPM1-206ENST00000358278 FAM49BQ9NUQ9 324 aa16.22■□□□□ 0.19
TPM1-206ENST00000358278 LMCD1Q9NZU5 365 aa16.22■□□□□ 0.19
TPM1-206ENST00000358278 CNTN6Q9UQ52 1028 aa16.22■□□□□ 0.19
TPM1-206ENST00000358278 LUC7L2Q9Y383 392 aaKnown RBP16.22■□□□□ 0.19
TPM1-206ENST00000358278 PATJQ8NI35 1801 aa16.21■□□□□ 0.19
TPM1-206ENST00000358278 ZNF638Q14966 1978 aaKnown RBP16.21■□□□□ 0.19
TPM1-206ENST00000358278 MYBPHLA2RUH7 354 aa16.21■□□□□ 0.19
TPM1-206ENST00000358278 LRRC53A6NM62 1247 aa16.21■□□□□ 0.19
TPM1-206ENST00000358278 RNF225M0QZC1 329 aaPredicted RBP16.21■□□□□ 0.19
TPM1-206ENST00000358278 PER2O15055 1255 aa16.21■□□□□ 0.19
TPM1-206ENST00000358278 GFPT2O94808 682 aa16.21■□□□□ 0.19
TPM1-206ENST00000358278 GLUD1P00367 558 aa16.21■□□□□ 0.19
TPM1-206ENST00000358278 CDC25BP30305 580 aa16.21■□□□□ 0.19
TPM1-206ENST00000358278 GNA15P30679 374 aa16.21■□□□□ 0.19
TPM1-206ENST00000358278 CASP14P31944 242 aa16.21■□□□□ 0.19
TPM1-206ENST00000358278 GPR17Q13304 367 aa16.21■□□□□ 0.19
TPM1-206ENST00000358278 RAB33AQ14088 237 aa16.21■□□□□ 0.19
TPM1-206ENST00000358278 NFE2Q16621 373 aaPredicted RBP16.21■□□□□ 0.19
TPM1-206ENST00000358278 CCDC142Q17RM4 750 aa16.21■□□□□ 0.19
TPM1-206ENST00000358278 SGO2Q562F6 1265 aa16.21■□□□□ 0.19
TPM1-206ENST00000358278 C4orf50Q6ZRC1 276 aa16.21■□□□□ 0.19
TPM1-206ENST00000358278 LRRTM3Q86VH5 581 aa16.21■□□□□ 0.19
TPM1-206ENST00000358278 FMNL3Q8IVF7 1028 aa16.21■□□□□ 0.19
TPM1-206ENST00000358278 DEFB123Q8N688 67 aa16.21■□□□□ 0.19
TPM1-206ENST00000358278 C12orf29Q8N999 325 aa16.21■□□□□ 0.19
TPM1-206ENST00000358278 BAP1Q92560 729 aa16.21■□□□□ 0.19
TPM1-206ENST00000358278 ANP32BQ92688 251 aaKnown RBP16.21■□□□□ 0.19
TPM1-206ENST00000358278 MYLPFQ96A32 169 aa16.21■□□□□ 0.19
TPM1-206ENST00000358278 LPIN3Q9BQK8 851 aa16.21■□□□□ 0.19
TPM1-206ENST00000358278 ABI2Q9NYB9 513 aaPredicted RBP16.21■□□□□ 0.19
TPM1-206ENST00000358278 MYO6Q9UM54 1294 aa16.21■□□□□ 0.19
TPM1-206ENST00000358278 CAPN11Q9UMQ6 739 aa16.21■□□□□ 0.19
TPM1-206ENST00000358278 GREB1Q4ZG55 1949 aa16.2■□□□□ 0.18
TPM1-206ENST00000358278 MYO16Q9Y6X6 1858 aa16.2■□□□□ 0.18
TPM1-206ENST00000358278 NRIP1P48552 1158 aa16.2■□□□□ 0.18
TPM1-206ENST00000358278 FXR1P51114 621 aaKnown RBP eCLIP16.2■□□□□ 0.18
TPM1-206ENST00000358278 ZBED6P86452 979 aa16.2■□□□□ 0.18
TPM1-206ENST00000358278 ARID5AQ03989 594 aa16.2■□□□□ 0.18
TPM1-206ENST00000358278 PTK2Q05397 1052 aa16.2■□□□□ 0.18
TPM1-206ENST00000358278 SMARCB1Q12824 385 aa16.2■□□□□ 0.18
TPM1-206ENST00000358278 TPGS2Q68CL5 300 aa16.2■□□□□ 0.18
TPM1-206ENST00000358278 SMYD5Q6GMV2 418 aa16.2■□□□□ 0.18
TPM1-206ENST00000358278 FAM171BQ6P995 826 aa16.2■□□□□ 0.18
TPM1-206ENST00000358278 RNF19BQ6ZMZ0 732 aa16.2■□□□□ 0.18
TPM1-206ENST00000358278 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.2■□□□□ 0.18
TPM1-206ENST00000358278 SPATA2LQ8IUW3 424 aaPredicted RBP16.2■□□□□ 0.18
TPM1-206ENST00000358278 GPIHBP1Q8IV16 184 aa16.2■□□□□ 0.18
TPM1-206ENST00000358278 ZNF461Q8TAF7 563 aa16.2■□□□□ 0.18
TPM1-206ENST00000358278 PCED1BQ96HM7 432 aa16.2■□□□□ 0.18
TPM1-206ENST00000358278 MED10Q9BTT4 135 aa16.2■□□□□ 0.18
TPM1-206ENST00000358278 PRUNE2Q8WUY3 3088 aa16.2■□□□□ 0.18
TPM1-206ENST00000358278 ATP8B3O60423 1300 aa16.19■□□□□ 0.18
TPM1-206ENST00000358278 MTMR11A4FU01 709 aa16.19■□□□□ 0.18
TPM1-206ENST00000358278 THAP12O43422 761 aa16.19■□□□□ 0.18
TPM1-206ENST00000358278 VDRP11473 427 aa16.19■□□□□ 0.18
TPM1-206ENST00000358278 CCDC130P13994 396 aa16.19■□□□□ 0.18
TPM1-206ENST00000358278 BRD2P25440 801 aaKnown RBP16.19■□□□□ 0.18
TPM1-206ENST00000358278 CLCN1P35523 988 aa16.19■□□□□ 0.18
TPM1-206ENST00000358278 PDE6CP51160 858 aa16.19■□□□□ 0.18
TPM1-206ENST00000358278 BPIFB4P59827 614 aa16.19■□□□□ 0.18
TPM1-206ENST00000358278 ADCY1Q08828 1119 aa16.19■□□□□ 0.18
TPM1-206ENST00000358278 ADGRE1Q14246 886 aa16.19■□□□□ 0.18
TPM1-206ENST00000358278 SFMBT2Q5VUG0 894 aa16.19■□□□□ 0.18
TPM1-206ENST00000358278 SLC47A2Q86VL8 602 aa16.19■□□□□ 0.18
TPM1-206ENST00000358278 C2orf15Q8WU43 125 aaKnown RBP16.19■□□□□ 0.18
TPM1-206ENST00000358278 CYFIP2Q96F07 1278 aa16.19■□□□□ 0.18
TPM1-206ENST00000358278 PKMYT1Q99640 499 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms