RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 DDR2Q16832 855 aa11□□□□□ -0.65
LINC01560-201ENST00000357412 INTS6LQ5JSJ4 861 aaKnown RBP11□□□□□ -0.65
LINC01560-201ENST00000357412 CSGALNACT2Q8N6G5 542 aa11□□□□□ -0.65
LINC01560-201ENST00000357412 LRRC52Q8N7C0 313 aa11□□□□□ -0.65
LINC01560-201ENST00000357412 STKLD1Q8NE28 680 aa11□□□□□ -0.65
LINC01560-201ENST00000357412 RIN3Q8TB24 985 aa11□□□□□ -0.65
LINC01560-201ENST00000357412 LEO1Q8WVC0 666 aaPredicted RBP11□□□□□ -0.65
LINC01560-201ENST00000357412 USP13Q92995 863 aaPredicted RBP11□□□□□ -0.65
LINC01560-201ENST00000357412 CHFRQ96EP1 664 aa11□□□□□ -0.65
LINC01560-201ENST00000357412 INTS4Q96HW7 963 aaKnown RBP11□□□□□ -0.65
LINC01560-201ENST00000357412 PI4K2AQ9BTU6 479 aa11□□□□□ -0.65
LINC01560-201ENST00000357412 PCIF1Q9H4Z3 704 aa11□□□□□ -0.65
LINC01560-201ENST00000357412 TMEM206Q9H813 350 aa11□□□□□ -0.65
LINC01560-201ENST00000357412 PDE11AQ9HCR9 933 aa11□□□□□ -0.65
LINC01560-201ENST00000357412 HPS4Q9NQG7 708 aa11□□□□□ -0.65
LINC01560-201ENST00000357412 PANK4Q9NVE7 773 aa11□□□□□ -0.65
LINC01560-201ENST00000357412 THG1LQ9NWX6 298 aaKnown RBP11□□□□□ -0.65
LINC01560-201ENST00000357412 GDAP2Q9NXN4 497 aa11□□□□□ -0.65
LINC01560-201ENST00000357412 DDX43Q9NXZ2 648 aaKnown RBP11□□□□□ -0.65
LINC01560-201ENST00000357412 SIX4Q9UIU6 781 aa11□□□□□ -0.65
LINC01560-201ENST00000357412 ZMYM5Q9UJ78 669 aa11□□□□□ -0.65
LINC01560-201ENST00000357412 GMEB2Q9UKD1 530 aa11□□□□□ -0.65
LINC01560-201ENST00000357412 NOTCH4Q99466 2003 aa11□□□□□ -0.65
LINC01560-201ENST00000357412 TDRD15B5MCY1 1934 aaKnown RBP10.99□□□□□ -0.65
LINC01560-201ENST00000357412 DOCK6Q96HP0 2047 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 OTOL1A6NHN0 477 aaPredicted RBP10.99□□□□□ -0.65
LINC01560-201ENST00000357412 SOBPA7XYQ1 873 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 CHURC1-FNTBB4DL54 471 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 TULP1O00294 542 aaPredicted RBP10.99□□□□□ -0.65
LINC01560-201ENST00000357412 GABRDO14764 452 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 HCRTO43612 131 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 HUS1O60921 280 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 TADA3O75528 432 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 RETP07949 1114 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 CSH1P0DML2 217 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 CSH2P0DML3 217 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 ACAT1P24752 427 aaKnown RBP10.99□□□□□ -0.65
LINC01560-201ENST00000357412 CYP2F1P24903 491 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 DDX6P26196 483 aaKnown RBP eCLIP10.99□□□□□ -0.65
LINC01560-201ENST00000357412 HOXA6P31267 233 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 AVPR1AP37288 418 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 NASPP49321 788 aaPredicted RBP10.99□□□□□ -0.65
LINC01560-201ENST00000357412 FNTBP49356 437 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 ATXN1P54253 815 aaKnown RBP10.99□□□□□ -0.65
LINC01560-201ENST00000357412 RBP5P82980 135 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 LMNB2Q03252 620 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 BFSP1Q12934 665 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 SRSF5Q13243 272 aaKnown RBP10.99□□□□□ -0.65
LINC01560-201ENST00000357412 CCDC142Q17RM4 750 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 ITPRIPL2Q3MIP1 535 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 TXNDC8Q6A555 127 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 TRIM68Q6AZZ1 485 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 LIMS2Q7Z4I7 341 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 MON1AQ86VX9 555 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 LONP2Q86WA8 852 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 SYCP3Q8IZU3 236 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 TMEM86AQ8N2M4 240 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 SYNPOQ8N3V7 929 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 TOP6BLQ8N6T0 577 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 MAB21L3Q8N8X9 362 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 LINC00301Q8NCQ3 95 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 GLIS3Q8NEA6 775 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 CACTINQ8WUQ7 758 aaKnown RBP10.99□□□□□ -0.65
LINC01560-201ENST00000357412 MYRFLQ96LU7 910 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 MTMR12Q9C0I1 747 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 ABCB6Q9NP58 842 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 GKN1Q9NS71 199 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 GTF3C4Q9UKN8 822 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 ITGA11Q9UKX5 1188 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 SNX9Q9Y5X1 595 aa10.99□□□□□ -0.65
LINC01560-201ENST00000357412 PRR5-ARHGAP8B1AHC4 643 aa10.98□□□□□ -0.65
LINC01560-201ENST00000357412 NOL4O94818 638 aa10.98□□□□□ -0.65
LINC01560-201ENST00000357412 KRT19P08727 400 aa10.98□□□□□ -0.65
LINC01560-201ENST00000357412 CNR2P34972 360 aa10.98□□□□□ -0.65
LINC01560-201ENST00000357412 HOXD13P35453 343 aa10.98□□□□□ -0.65
LINC01560-201ENST00000357412 RPL10AP62906 217 aaKnown RBP10.98□□□□□ -0.65
LINC01560-201ENST00000357412 ARHGAP8P85298 464 aa10.98□□□□□ -0.65
LINC01560-201ENST00000357412 MYL7Q01449 175 aa10.98□□□□□ -0.65
LINC01560-201ENST00000357412 RUNX3Q13761 415 aa10.98□□□□□ -0.65
LINC01560-201ENST00000357412 SIM2Q14190 667 aaPredicted RBP10.98□□□□□ -0.65
LINC01560-201ENST00000357412 ZNF268Q14587 947 aaPredicted RBP10.98□□□□□ -0.65
LINC01560-201ENST00000357412 E2F4Q16254 413 aa10.98□□□□□ -0.65
LINC01560-201ENST00000357412 SOWAHAQ2M3V2 549 aa10.98□□□□□ -0.65
LINC01560-201ENST00000357412 CFAP221Q4G0U5 840 aa10.98□□□□□ -0.65
LINC01560-201ENST00000357412 TMEM196Q5HYL7 178 aa10.98□□□□□ -0.65
LINC01560-201ENST00000357412 LMBRD2Q68DH5 695 aaPredicted RBP10.98□□□□□ -0.65
LINC01560-201ENST00000357412 LAIR1Q6GTX8 287 aa10.98□□□□□ -0.65
LINC01560-201ENST00000357412 PKN3Q6P5Z2 889 aa10.98□□□□□ -0.65
LINC01560-201ENST00000357412 FAM171BQ6P995 826 aa10.98□□□□□ -0.65
LINC01560-201ENST00000357412 PRR23BQ6ZRT6 265 aa10.98□□□□□ -0.65
LINC01560-201ENST00000357412 CBWD2Q8IUF1 395 aa10.98□□□□□ -0.65
LINC01560-201ENST00000357412 GPD1LQ8N335 351 aa10.98□□□□□ -0.65
LINC01560-201ENST00000357412 PDILTQ8N807 584 aa10.98□□□□□ -0.65
LINC01560-201ENST00000357412 OR5B17Q8NGF7 314 aa10.98□□□□□ -0.65
LINC01560-201ENST00000357412 SPATA18Q8TC71 538 aa10.98□□□□□ -0.65
LINC01560-201ENST00000357412 MRPS31Q92665 395 aaKnown RBP10.98□□□□□ -0.65
LINC01560-201ENST00000357412 HPS3Q969F9 1004 aa10.98□□□□□ -0.65
LINC01560-201ENST00000357412 ZSCAN16Q9H4T2 348 aaPredicted RBP10.98□□□□□ -0.65
LINC01560-201ENST00000357412 EBF3Q9H4W6 596 aa10.98□□□□□ -0.65
LINC01560-201ENST00000357412 TDP1Q9NUW8 608 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms