RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 AVENQ9NQS1 362 aaPredicted RBP7.17□□□□□ -1.26
RTN4-203ENST00000357376 CISHQ9NSE2 258 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 UBR2Q8IWV8 1755 aa7.17□□□□□ -1.26
RTN4-203ENST00000357376 B2RBV5 119 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 TRIM49D1C9J1S8 452 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 NVLO15381 856 aaKnown RBP7.16□□□□□ -1.26
RTN4-203ENST00000357376 ZC3H11AO75152 810 aaKnown RBP eCLIP7.16□□□□□ -1.261e-32■■■■□ 22.5
RTN4-203ENST00000357376 CSDE1O75534 798 aaKnown RBP7.16□□□□□ -1.26
RTN4-203ENST00000357376 KRT38O76015 456 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 UNC5CO95185 931 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 CCNE2O96020 404 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 BGNP21810 368 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 ADSSP30520 456 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 VCPP55072 806 aaKnown RBP7.16□□□□□ -1.26
RTN4-203ENST00000357376 MRPS9P82933 396 aaKnown RBP7.16□□□□□ -1.26
RTN4-203ENST00000357376 MORF4L2Q15014 288 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 CCDC14Q49A88 953 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 MFSD5Q6N075 450 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 TMEM154Q6P9G4 183 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 SAMD7Q7Z3H4 446 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 PIGWQ7Z7B1 504 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 ZNF354CQ86Y25 554 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 CCDC60Q8IWA6 550 aaPredicted RBP7.16□□□□□ -1.26
RTN4-203ENST00000357376 TRIM42Q8IWZ5 723 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 ZCCHC9Q8N567 271 aaKnown RBP7.16□□□□□ -1.26
RTN4-203ENST00000357376 PAF1Q8N7H5 531 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 CDKL2Q92772 493 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 MIEF2Q96C03 454 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 TUBB6Q9BUF5 446 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 DNAI2Q9GZS0 605 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.16□□□□□ -1.26
RTN4-203ENST00000357376 DLGAP2Q9P1A6 1054 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 ARMCX1Q9P291 453 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 ZC3H7BQ9UGR2 993 aaKnown RBP7.16□□□□□ -1.26
RTN4-203ENST00000357376 ENTPD5O75356 428 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 UPP2O95045 317 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 LMNAP02545 664 aaKnown RBP7.16□□□□□ -1.26
RTN4-203ENST00000357376 YY1P25490 414 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 KLC1Q07866 573 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 BMPR2Q13873 1038 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 EFTUD2Q15029 972 aaKnown RBP eCLIP7.16□□□□□ -1.264e-14■■■■■ 28.8
RTN4-203ENST00000357376 NFIL3Q16649 462 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 MROH9Q5TGP6 573 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 VSTM1Q6UX27 236 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 ECHDC2Q86YB7 292 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 SULF1Q8IWU6 871 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 OR5B17Q8NGF7 314 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 ZNF75CPQ92670 426 aaPredicted RBP7.16□□□□□ -1.26
RTN4-203ENST00000357376 AKT1S1Q96B36 256 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 THTPAQ9BU02 230 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 TEX13BQ9BXU2 312 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 C17orf75Q9HAS0 396 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 GPATCH2LQ9NWQ4 482 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 CAPN9O14815 690 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 MGRN1O60291 552 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 STAMBPO95630 424 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 OATP04181 439 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 MYL2P10916 166 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 PYGBP11216 843 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 POU5F1Q01860 360 aaKnown RBP7.16□□□□□ -1.26
RTN4-203ENST00000357376 THOC5Q13769 683 aaKnown RBP7.16□□□□□ -1.26
RTN4-203ENST00000357376 SGSM1Q2NKQ1 1148 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 NAIF1Q69YI7 327 aaPredicted RBP7.16□□□□□ -1.26
RTN4-203ENST00000357376 LRRC6Q86X45 466 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 DNAAF3Q8N9W5 541 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.16□□□□□ -1.262e-32■□□□□ 11.2
RTN4-203ENST00000357376 RNF34Q969K3 372 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 VPS11Q9H270 941 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 DHX35Q9H5Z1 703 aaKnown RBP7.16□□□□□ -1.26
RTN4-203ENST00000357376 DONSONQ9NYP3 566 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 NUB1Q9Y5A7 615 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 PLCH1Q4KWH8 1693 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 MROH7Q68CQ1 1323 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 IRS2Q9Y4H2 1338 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 COL14A1Q05707 1796 aaKnown RBP7.16□□□□□ -1.26
RTN4-203ENST00000357376 LIASO43766 372 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 TAC1P20366 129 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 SERPINB3P29508 390 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 SDC4P31431 198 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 DSG3P32926 999 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 NOVP48745 357 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 CDH8P55286 799 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 SLC8A3P57103 927 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 SESN2P58004 480 aaPredicted RBP7.16□□□□□ -1.26
RTN4-203ENST00000357376 NOMO3P69849 1222 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 TAP1Q03518 808 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 GRAMD1BQ3KR37 738 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 RGS9BPQ6ZS82 235 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 WDR75Q8IWA0 830 aaKnown RBP7.16□□□□□ -1.26
RTN4-203ENST00000357376 KATNAL2Q8IYT4 538 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 LRRN4Q8WUT4 740 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 PRPF31Q8WWY3 499 aaKnown RBP7.16□□□□□ -1.26
RTN4-203ENST00000357376 NLRP7Q8WX94 980 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 GPRASP2Q96D09 838 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 TBC1D10AQ9BXI6 508 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 ANGPTL2Q9UKU9 493 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 ZNRF3Q9ULT6 936 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 UBIAD1Q9Y5Z9 338 aa7.16□□□□□ -1.26
RTN4-203ENST00000357376 LRP5O75197 1615 aa7.15□□□□□ -1.26
RTN4-203ENST00000357376 UMODL1Q5DID0 1318 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms