RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 DGKKQ5KSL6 1271 aa11.46□□□□□ -0.57
CAPN3-204ENST00000356316 CC2D1AQ6P1N0 951 aaPredicted RBP11.46□□□□□ -0.57
CAPN3-204ENST00000356316 ZNF687Q8N1G0 1237 aa11.46□□□□□ -0.57
CAPN3-204ENST00000356316 GPD1LQ8N335 351 aa11.46□□□□□ -0.57
CAPN3-204ENST00000356316 PDCL2Q8N4E4 241 aa11.46□□□□□ -0.57
CAPN3-204ENST00000356316 LRRC52Q8N7C0 313 aa11.46□□□□□ -0.57
CAPN3-204ENST00000356316 IQUBQ8NA54 791 aa11.46□□□□□ -0.57
CAPN3-204ENST00000356316 TTC8Q8TAM2 541 aa11.46□□□□□ -0.57
CAPN3-204ENST00000356316 MRPS31Q92665 395 aaKnown RBP11.46□□□□□ -0.57
CAPN3-204ENST00000356316 RSPRY1Q96DX4 576 aa11.46□□□□□ -0.57
CAPN3-204ENST00000356316 ANKRD36BP1Q96IX9 119 aa11.46□□□□□ -0.57
CAPN3-204ENST00000356316 ZFYVE19Q96K21 471 aa11.46□□□□□ -0.57
CAPN3-204ENST00000356316 ACBD6Q9BR61 282 aa11.46□□□□□ -0.57
CAPN3-204ENST00000356316 PI4K2AQ9BTU6 479 aa11.46□□□□□ -0.57
CAPN3-204ENST00000356316 SLC46A2Q9BY10 475 aa11.46□□□□□ -0.57
CAPN3-204ENST00000356316 CUEDC2Q9H467 287 aa11.46□□□□□ -0.57
CAPN3-204ENST00000356316 KIAA1586Q9HCI6 787 aa11.46□□□□□ -0.57
CAPN3-204ENST00000356316 PRMT8Q9NR22 394 aaPredicted RBP11.46□□□□□ -0.57
CAPN3-204ENST00000356316 DDX43Q9NXZ2 648 aaKnown RBP11.46□□□□□ -0.57
CAPN3-204ENST00000356316 GTSE1Q9NYZ3 720 aa11.46□□□□□ -0.57
CAPN3-204ENST00000356316 TFIP11Q9UBB9 837 aaKnown RBP11.46□□□□□ -0.57
CAPN3-204ENST00000356316 UXTQ9UBK9 157 aaPredicted RBP11.46□□□□□ -0.57
CAPN3-204ENST00000356316 MAGED2Q9UNF1 606 aaPredicted RBP11.46□□□□□ -0.57
CAPN3-204ENST00000356316 SNX9Q9Y5X1 595 aa11.46□□□□□ -0.57
CAPN3-204ENST00000356316 NUP210Q8TEM1 1887 aaPredicted RBP11.46□□□□□ -0.58
CAPN3-204ENST00000356316 ZNF638Q14966 1978 aaKnown RBP11.45□□□□□ -0.58
CAPN3-204ENST00000356316 RIF1Q5UIP0 2472 aaKnown RBP11.45□□□□□ -0.58
CAPN3-204ENST00000356316 FAM186AA6NE01 2351 aa11.45□□□□□ -0.58
CAPN3-204ENST00000356316 TSC2P49815 1807 aa11.45□□□□□ -0.58
CAPN3-204ENST00000356316 FRMD3A2A2Y4 597 aa11.45□□□□□ -0.58
CAPN3-204ENST00000356316 SHISA7A6NL88 538 aa11.45□□□□□ -0.58
CAPN3-204ENST00000356316 SOBPA7XYQ1 873 aa11.45□□□□□ -0.58
CAPN3-204ENST00000356316 SPECC1L-ADORA2AF8WAN1 911 aa11.45□□□□□ -0.58
CAPN3-204ENST00000356316 ARNTLO00327 626 aa11.45□□□□□ -0.58
CAPN3-204ENST00000356316 SPTLC2O15270 562 aa11.45□□□□□ -0.58
CAPN3-204ENST00000356316 LILRB5O75023 590 aa11.45□□□□□ -0.58
CAPN3-204ENST00000356316 PPP6R2O75170 966 aa11.45□□□□□ -0.58
CAPN3-204ENST00000356316 TNNC2P02585 160 aa11.45□□□□□ -0.58
CAPN3-204ENST00000356316 PDIA4P13667 645 aaKnown RBP11.45□□□□□ -0.58
CAPN3-204ENST00000356316 SDHBP21912 280 aa11.45□□□□□ -0.58
CAPN3-204ENST00000356316 PCSK1P29120 753 aa11.45□□□□□ -0.58
CAPN3-204ENST00000356316 NLRP12P59046 1061 aa11.45□□□□□ -0.58
CAPN3-204ENST00000356316 DUOXA2Q1HG44 320 aa11.45□□□□□ -0.58
CAPN3-204ENST00000356316 ITPRIPL2Q3MIP1 535 aa11.45□□□□□ -0.58
CAPN3-204ENST00000356316 SPATA2LQ8IUW3 424 aaPredicted RBP11.45□□□□□ -0.58
CAPN3-204ENST00000356316 CMTM8Q8IZV2 173 aa11.45□□□□□ -0.58
CAPN3-204ENST00000356316 SPEM1Q8N4L4 309 aa11.45□□□□□ -0.58
CAPN3-204ENST00000356316 TOP6BLQ8N6T0 577 aa11.45□□□□□ -0.58
CAPN3-204ENST00000356316 MAB21L3Q8N8X9 362 aa11.45□□□□□ -0.58
CAPN3-204ENST00000356316 C1orf127Q8N9H9 656 aa11.45□□□□□ -0.58
CAPN3-204ENST00000356316 LINC00301Q8NCQ3 95 aa11.45□□□□□ -0.58
CAPN3-204ENST00000356316 NELL1Q92832 810 aa11.45□□□□□ -0.58
CAPN3-204ENST00000356316 CBWD1Q9BRT8 395 aa11.45□□□□□ -0.58
CAPN3-204ENST00000356316 MKNK1Q9BUB5 465 aa11.45□□□□□ -0.58
CAPN3-204ENST00000356316 BACH2Q9BYV9 841 aa11.45□□□□□ -0.58
CAPN3-204ENST00000356316 EPC1Q9H2F5 836 aa11.45□□□□□ -0.58
CAPN3-204ENST00000356316 TNMDQ9H2S6 317 aa11.45□□□□□ -0.58
CAPN3-204ENST00000356316 PDE11AQ9HCR9 933 aa11.45□□□□□ -0.58
CAPN3-204ENST00000356316 ABCB6Q9NP58 842 aa11.45□□□□□ -0.58
CAPN3-204ENST00000356316 GDAP2Q9NXN4 497 aa11.45□□□□□ -0.58
CAPN3-204ENST00000356316 GMEB2Q9UKD1 530 aa11.45□□□□□ -0.58
CAPN3-204ENST00000356316 DCHS1Q96JQ0 3298 aa11.45□□□□□ -0.58
CAPN3-204ENST00000356316 A0A087X0B3 334 aa11.44□□□□□ -0.58
CAPN3-204ENST00000356316 MYBPHLA2RUH7 354 aa11.44□□□□□ -0.58
CAPN3-204ENST00000356316 CTHP32929 405 aa11.44□□□□□ -0.58
CAPN3-204ENST00000356316 SOX9P48436 509 aa11.44□□□□□ -0.58
CAPN3-204ENST00000356316 NASPP49321 788 aaPredicted RBP11.44□□□□□ -0.58
CAPN3-204ENST00000356316 ASIC1P78348 528 aa11.44□□□□□ -0.58
CAPN3-204ENST00000356316 PUM1Q14671 1186 aaKnown RBP eCLIP11.44□□□□□ -0.58
CAPN3-204ENST00000356316 INTS6LQ5JSJ4 861 aaKnown RBP11.44□□□□□ -0.58
CAPN3-204ENST00000356316 DPH6Q7L8W6 267 aa11.44□□□□□ -0.58
CAPN3-204ENST00000356316 DGLUCYQ7Z3D6 616 aa11.44□□□□□ -0.58
CAPN3-204ENST00000356316 SYNPOQ8N3V7 929 aa11.44□□□□□ -0.58
CAPN3-204ENST00000356316 FSIP1Q8NA03 581 aa11.44□□□□□ -0.58
CAPN3-204ENST00000356316 ZSWIM2Q8NEG5 633 aa11.44□□□□□ -0.58
CAPN3-204ENST00000356316 SPATA18Q8TC71 538 aa11.44□□□□□ -0.58
CAPN3-204ENST00000356316 EXOC4Q96A65 974 aa11.44□□□□□ -0.58
CAPN3-204ENST00000356316 DHX58Q96C10 678 aa11.44□□□□□ -0.58
CAPN3-204ENST00000356316 HPDLQ96IR7 371 aa11.44□□□□□ -0.58
CAPN3-204ENST00000356316 LRRC3BQ96PB8 259 aa11.44□□□□□ -0.58
CAPN3-204ENST00000356316 SMG9Q9H0W8 520 aaKnown RBP11.44□□□□□ -0.58
CAPN3-204ENST00000356316 IL21Q9HBE4 155 aa11.44□□□□□ -0.58
CAPN3-204ENST00000356316 GKN1Q9NS71 199 aa11.44□□□□□ -0.58
CAPN3-204ENST00000356316 TDP1Q9NUW8 608 aa11.44□□□□□ -0.58
CAPN3-204ENST00000356316 GTF3C4Q9UKN8 822 aa11.44□□□□□ -0.58
CAPN3-204ENST00000356316 L1RE1Q9UN81 338 aa11.44□□□□□ -0.58
CAPN3-204ENST00000356316 SMG5Q9UPR3 1016 aaKnown RBP11.44□□□□□ -0.58
CAPN3-204ENST00000356316 SPTBN4Q9H254 2564 aa11.44□□□□□ -0.58
CAPN3-204ENST00000356316 NCANO14594 1321 aa11.43□□□□□ -0.58
CAPN3-204ENST00000356316 CUTAO60888 179 aa11.43□□□□□ -0.58
CAPN3-204ENST00000356316 PRAMEF12O95522 483 aa11.43□□□□□ -0.58
CAPN3-204ENST00000356316 F11P03951 625 aa11.43□□□□□ -0.58
CAPN3-204ENST00000356316 TNNI1P19237 187 aa11.43□□□□□ -0.58
CAPN3-204ENST00000356316 ACAT1P24752 427 aaKnown RBP11.43□□□□□ -0.58
CAPN3-204ENST00000356316 CYP2F1P24903 491 aa11.43□□□□□ -0.58
CAPN3-204ENST00000356316 CNR2P34972 360 aa11.43□□□□□ -0.58
CAPN3-204ENST00000356316 SATB1Q01826 763 aa11.43□□□□□ -0.58
CAPN3-204ENST00000356316 TNK2Q07912 1038 aa11.43□□□□□ -0.58
CAPN3-204ENST00000356316 PON2Q15165 354 aa11.43□□□□□ -0.58
CAPN3-204ENST00000356316 MAPRE1Q15691 268 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms