RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 SEL1L2Q5TEA6 688 aa16.49■□□□□ 0.23
RTN3-205ENST00000356000 LPCAT2Q7L5N7 544 aa16.49■□□□□ 0.23
RTN3-205ENST00000356000 ACTRT2Q8TDY3 377 aa16.49■□□□□ 0.23
RTN3-205ENST00000356000 KRT35Q92764 455 aa16.49■□□□□ 0.23
RTN3-205ENST00000356000 RANBP9Q96S59 729 aa16.49■□□□□ 0.23
RTN3-205ENST00000356000 C1orf21Q9H246 121 aa16.49■□□□□ 0.23
RTN3-205ENST00000356000 LRRC19Q9H756 370 aa16.49■□□□□ 0.23
RTN3-205ENST00000356000 APPL1Q9UKG1 709 aa16.49■□□□□ 0.23
RTN3-205ENST00000356000 CAPN8A6NHC0 703 aa16.49■□□□□ 0.23
RTN3-205ENST00000356000 AQP9O43315 295 aa16.49■□□□□ 0.23
RTN3-205ENST00000356000 ENO1P06733 434 aaKnown RBP16.49■□□□□ 0.23
RTN3-205ENST00000356000 HMOX2P30519 316 aa16.49■□□□□ 0.23
RTN3-205ENST00000356000 HSD17B4P51659 736 aa16.49■□□□□ 0.23
RTN3-205ENST00000356000 ARL4CP56559 192 aa16.49■□□□□ 0.23
RTN3-205ENST00000356000 CD300CQ08708 224 aa16.49■□□□□ 0.23
RTN3-205ENST00000356000 TROAPQ12815 778 aa16.49■□□□□ 0.23
RTN3-205ENST00000356000 PFKFB3Q16875 520 aaPredicted RBP16.49■□□□□ 0.23
RTN3-205ENST00000356000 ZNF804AQ7Z570 1209 aa16.49■□□□□ 0.23
RTN3-205ENST00000356000 USP6NLQ92738 828 aa16.49■□□□□ 0.23
RTN3-205ENST00000356000 ZSWIM1Q9BR11 485 aa16.49■□□□□ 0.23
RTN3-205ENST00000356000 CYP26A1O43174 497 aa16.49■□□□□ 0.23
RTN3-205ENST00000356000 CALM1P0DP23 149 aa16.49■□□□□ 0.23
RTN3-205ENST00000356000 CALM2P0DP24 149 aa16.49■□□□□ 0.23
RTN3-205ENST00000356000 CALM3P0DP25 149 aa16.49■□□□□ 0.23
RTN3-205ENST00000356000 ZNF23P17027 643 aa16.49■□□□□ 0.23
RTN3-205ENST00000356000 POLR2EP19388 210 aaKnown RBP16.49■□□□□ 0.23
RTN3-205ENST00000356000 ALDH3B2P48448 385 aa16.49■□□□□ 0.23
RTN3-205ENST00000356000 JAM2P57087 298 aa16.49■□□□□ 0.23
RTN3-205ENST00000356000 PSMD6Q15008 389 aa16.49■□□□□ 0.23
RTN3-205ENST00000356000 KCNJ8Q15842 424 aa16.49■□□□□ 0.23
RTN3-205ENST00000356000 GRAMD1BQ3KR37 738 aa16.49■□□□□ 0.23
RTN3-205ENST00000356000 C1orf141Q5JVX7 400 aa16.49■□□□□ 0.23
RTN3-205ENST00000356000 IYDQ6PHW0 289 aa16.49■□□□□ 0.23
RTN3-205ENST00000356000 NLRP10Q86W26 655 aa16.49■□□□□ 0.23
RTN3-205ENST00000356000 IFNL2Q8IZJ0 200 aa16.49■□□□□ 0.23
RTN3-205ENST00000356000 ENAHQ8N8S7 591 aaPredicted RBP16.49■□□□□ 0.23
RTN3-205ENST00000356000 JADE3Q92613 823 aa16.49■□□□□ 0.23
RTN3-205ENST00000356000 CCDC85AQ96PX6 553 aaPredicted RBP16.49■□□□□ 0.23
RTN3-205ENST00000356000 PAIP1Q9H074 479 aaKnown RBP16.49■□□□□ 0.23
RTN3-205ENST00000356000 ASIC3Q9UHC3 531 aa16.49■□□□□ 0.23
RTN3-205ENST00000356000 ERVV-2B6SEH9 535 aa16.48■□□□□ 0.23
RTN3-205ENST00000356000 IRS4O14654 1257 aaPredicted RBP16.48■□□□□ 0.23
RTN3-205ENST00000356000 PDE8AO60658 829 aa16.48■□□□□ 0.23
RTN3-205ENST00000356000 VEGFAP15692 232 aaPredicted RBP16.48■□□□□ 0.23
RTN3-205ENST00000356000 MARCKSL1P49006 195 aa16.48■□□□□ 0.23
RTN3-205ENST00000356000 SLC5A3P53794 718 aa16.48■□□□□ 0.23
RTN3-205ENST00000356000 PPP2R2DQ66LE6 453 aa16.48■□□□□ 0.23
RTN3-205ENST00000356000 NANOGP8Q6NSW7 305 aa16.48■□□□□ 0.23
RTN3-205ENST00000356000 FASTKD5Q7L8L6 764 aaKnown RBP16.48■□□□□ 0.23
RTN3-205ENST00000356000 SLC13A5Q86YT5 568 aaPredicted RBP16.48■□□□□ 0.23
RTN3-205ENST00000356000 VGLL2Q8N8G2 317 aa16.48■□□□□ 0.23
RTN3-205ENST00000356000 SLC26A7Q8TE54 656 aa16.48■□□□□ 0.23
RTN3-205ENST00000356000 ARHGEF26Q96DR7 871 aa16.48■□□□□ 0.23
RTN3-205ENST00000356000 EHD1Q9H4M9 534 aa16.48■□□□□ 0.23
RTN3-205ENST00000356000 SSU72Q9NP77 194 aaKnown RBP16.48■□□□□ 0.23
RTN3-205ENST00000356000 NCKIPSDQ9NZQ3 722 aa16.48■□□□□ 0.23
RTN3-205ENST00000356000 TAGLN3Q9UI15 199 aa16.48■□□□□ 0.23
RTN3-205ENST00000356000 MYOCOSA0A1B0GUC4 107 aa16.48■□□□□ 0.23
RTN3-205ENST00000356000 A0A1W2PQ67 120 aa16.48■□□□□ 0.23
RTN3-205ENST00000356000 MCF2LO15068 1137 aa16.48■□□□□ 0.23
RTN3-205ENST00000356000 SORBS3O60504 671 aa16.48■□□□□ 0.23
RTN3-205ENST00000356000 ZBTB11O95625 1053 aaPredicted RBP16.48■□□□□ 0.23
RTN3-205ENST00000356000 FAM58BPP0C7Q3 252 aa16.48■□□□□ 0.23
RTN3-205ENST00000356000 SRGAP2CP0DJJ0 459 aa16.48■□□□□ 0.23
RTN3-205ENST00000356000 SRGAP2BP0DMP2 458 aa16.48■□□□□ 0.23
RTN3-205ENST00000356000 KRT15P19012 456 aa16.48■□□□□ 0.23
RTN3-205ENST00000356000 C21orf59P57076 290 aa16.48■□□□□ 0.23
RTN3-205ENST00000356000 CCNIQ14094 377 aa16.48■□□□□ 0.23
RTN3-205ENST00000356000 DYMQ7RTS9 669 aa16.48■□□□□ 0.23
RTN3-205ENST00000356000 PPM1KQ8N3J5 372 aa16.48■□□□□ 0.23
RTN3-205ENST00000356000 TMCO5AQ8N6Q1 288 aa16.48■□□□□ 0.23
RTN3-205ENST00000356000 DCUN1D1Q96GG9 259 aa16.48■□□□□ 0.23
RTN3-205ENST00000356000 ZNF512BQ96KM6 892 aaPredicted RBP16.48■□□□□ 0.23
RTN3-205ENST00000356000 NUP85Q9BW27 656 aa16.48■□□□□ 0.23
RTN3-205ENST00000356000 TSSK1BQ9BXA7 367 aa16.48■□□□□ 0.23
RTN3-205ENST00000356000 MANSC1Q9H8J5 431 aa16.48■□□□□ 0.23
RTN3-205ENST00000356000 BLOC1S4Q9NUP1 217 aa16.48■□□□□ 0.23
RTN3-205ENST00000356000 KLHL3Q9UH77 587 aa16.48■□□□□ 0.23
RTN3-205ENST00000356000 EXOC1LA0A1B0GW35 172 aa16.47■□□□□ 0.23
RTN3-205ENST00000356000 FBXO21O94952 628 aa16.47■□□□□ 0.23
RTN3-205ENST00000356000 ABCB4P21439 1286 aa16.47■□□□□ 0.23
RTN3-205ENST00000356000 KPNA1P52294 538 aaPredicted RBP16.47■□□□□ 0.23
RTN3-205ENST00000356000 HADHBP55084 474 aaKnown RBP16.47■□□□□ 0.23
RTN3-205ENST00000356000 RHBDL3P58872 404 aa16.47■□□□□ 0.23
RTN3-205ENST00000356000 POU5F2Q8N7G0 328 aa16.47■□□□□ 0.23
RTN3-205ENST00000356000 CXorf38Q8TB03 319 aa16.47■□□□□ 0.23
RTN3-205ENST00000356000 PWWP2AQ96N64 755 aa16.47■□□□□ 0.23
RTN3-205ENST00000356000 MKNK1Q9BUB5 465 aa16.47■□□□□ 0.23
RTN3-205ENST00000356000 COG5Q9UP83 839 aa16.47■□□□□ 0.23
RTN3-205ENST00000356000 INPP5FQ9Y2H2 1132 aa16.47■□□□□ 0.23
RTN3-205ENST00000356000 RBMX2Q9Y388 322 aaKnown RBP16.47■□□□□ 0.23
RTN3-205ENST00000356000 TRIM64CA6NLI5 447 aa16.47■□□□□ 0.23
RTN3-205ENST00000356000 M0R2N6 131 aa16.47■□□□□ 0.23
RTN3-205ENST00000356000 SULT1C4O75897 302 aa16.47■□□□□ 0.23
RTN3-205ENST00000356000 STAMBPO95630 424 aa16.47■□□□□ 0.23
RTN3-205ENST00000356000 CRTAMO95727 393 aa16.47■□□□□ 0.23
RTN3-205ENST00000356000 APOEP02649 317 aa16.47■□□□□ 0.23
RTN3-205ENST00000356000 LMNB1P20700 586 aa16.47■□□□□ 0.23
RTN3-205ENST00000356000 ADRA1DP25100 572 aa16.47■□□□□ 0.23
RTN3-205ENST00000356000 RCVRNP35243 200 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms