RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 SEPT6Q14141 434 aa12.9□□□□□ -0.34
COLCA1-201ENST00000355430 HSP90AA5PQ58FG0 334 aa12.9□□□□□ -0.34
COLCA1-201ENST00000355430 C3orf62Q6ZUJ4 267 aa12.9□□□□□ -0.34
COLCA1-201ENST00000355430 STKLD1Q8NE28 680 aa12.9□□□□□ -0.34
COLCA1-201ENST00000355430 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.9□□□□□ -0.34
COLCA1-201ENST00000355430 FAM53CQ9NYF3 392 aa12.9□□□□□ -0.34
COLCA1-201ENST00000355430 H7C4K7 107 aa12.9□□□□□ -0.34
COLCA1-201ENST00000355430 CA12O43570 354 aa12.9□□□□□ -0.34
COLCA1-201ENST00000355430 CCDC22O60826 627 aa12.9□□□□□ -0.34
COLCA1-201ENST00000355430 IL18RAPO95256 599 aa12.9□□□□□ -0.34
COLCA1-201ENST00000355430 PYGMP11217 842 aa12.9□□□□□ -0.34
COLCA1-201ENST00000355430 NLRP11P59045 1033 aaKnown RBP12.9□□□□□ -0.34
COLCA1-201ENST00000355430 NCOA4Q13772 614 aa12.9□□□□□ -0.34
COLCA1-201ENST00000355430 TRPM4Q8TD43 1214 aa12.9□□□□□ -0.34
COLCA1-201ENST00000355430 ELMO3Q96BJ8 720 aa12.9□□□□□ -0.34
COLCA1-201ENST00000355430 FAM163AQ96GL9 167 aaPredicted RBP12.9□□□□□ -0.34
COLCA1-201ENST00000355430 WNK4Q96J92 1243 aa12.9□□□□□ -0.34
COLCA1-201ENST00000355430 FOXP3Q9BZS1 431 aa12.9□□□□□ -0.34
COLCA1-201ENST00000355430 HNRNPCL1O60812 293 aaKnown RBP12.9□□□□□ -0.34
COLCA1-201ENST00000355430 GSTA2P09210 222 aa12.9□□□□□ -0.34
COLCA1-201ENST00000355430 ALDH1A3P47895 512 aa12.9□□□□□ -0.34
COLCA1-201ENST00000355430 OVGP1Q12889 678 aa12.9□□□□□ -0.34
COLCA1-201ENST00000355430 ECM1Q16610 540 aa12.9□□□□□ -0.34
COLCA1-201ENST00000355430 SMTNL2Q2TAL5 461 aa12.9□□□□□ -0.34
COLCA1-201ENST00000355430 APOBEC3HQ6NTF7 200 aaKnown RBP12.9□□□□□ -0.34
COLCA1-201ENST00000355430 DHX38Q92620 1227 aaKnown RBP12.9□□□□□ -0.34
COLCA1-201ENST00000355430 EPS15L1Q9UBC2 864 aa12.9□□□□□ -0.34
COLCA1-201ENST00000355430 SLC15A5A6NIM6 579 aa12.9□□□□□ -0.35
COLCA1-201ENST00000355430 BCAR1P56945 870 aa12.9□□□□□ -0.35
COLCA1-201ENST00000355430 SV2CQ496J9 727 aa12.9□□□□□ -0.35
COLCA1-201ENST00000355430 ANKRD20A4Q4UJ75 823 aa12.9□□□□□ -0.35
COLCA1-201ENST00000355430 ANKRD20A2Q5SQ80 823 aa12.9□□□□□ -0.35
COLCA1-201ENST00000355430 ANKRD20A1Q5TYW2 823 aa12.9□□□□□ -0.35
COLCA1-201ENST00000355430 TMEM154Q6P9G4 183 aa12.9□□□□□ -0.35
COLCA1-201ENST00000355430 DEFB128Q7Z7B8 93 aa12.9□□□□□ -0.35
COLCA1-201ENST00000355430 FEZF2Q8TBJ5 459 aa12.9□□□□□ -0.35
COLCA1-201ENST00000355430 PRPF31Q8WWY3 499 aaKnown RBP12.9□□□□□ -0.35
COLCA1-201ENST00000355430 DNAJC9Q8WXX5 260 aa12.9□□□□□ -0.35
COLCA1-201ENST00000355430 RANBP17Q9H2T7 1088 aaKnown RBP12.9□□□□□ -0.35
COLCA1-201ENST00000355430 IRAK4Q9NWZ3 460 aa12.9□□□□□ -0.35
COLCA1-201ENST00000355430 MARCOQ9UEW3 520 aaPredicted RBP12.9□□□□□ -0.35
COLCA1-201ENST00000355430 RGPD1P0DJD0 1748 aa12.89□□□□□ -0.35
COLCA1-201ENST00000355430 NVLO15381 856 aaKnown RBP12.89□□□□□ -0.35
COLCA1-201ENST00000355430 S100BP04271 92 aaPredicted RBP12.89□□□□□ -0.35
COLCA1-201ENST00000355430 SNRPFP62306 86 aaKnown RBP12.89□□□□□ -0.35
COLCA1-201ENST00000355430 PTK7Q13308 1070 aa12.89□□□□□ -0.35
COLCA1-201ENST00000355430 CBWD6Q4V339 395 aa12.89□□□□□ -0.35
COLCA1-201ENST00000355430 CBWD3Q5JTY5 395 aa12.89□□□□□ -0.35
COLCA1-201ENST00000355430 CBWD5Q5RIA9 395 aa12.89□□□□□ -0.35
COLCA1-201ENST00000355430 ATF7IP2Q5U623 682 aa12.89□□□□□ -0.35
COLCA1-201ENST00000355430 DCLK2Q8N568 766 aa12.89□□□□□ -0.35
COLCA1-201ENST00000355430 PPWD1Q96BP3 646 aaKnown RBP12.89□□□□□ -0.35
COLCA1-201ENST00000355430 SERPINI1Q99574 410 aa12.89□□□□□ -0.35
COLCA1-201ENST00000355430 KCNQ5Q9NR82 932 aa12.89□□□□□ -0.35
COLCA1-201ENST00000355430 TAS2R14Q9NYV8 317 aa12.89□□□□□ -0.35
COLCA1-201ENST00000355430 LMO7Q8WWI1 1683 aa12.89□□□□□ -0.35
COLCA1-201ENST00000355430 VWA5AO00534 786 aa12.89□□□□□ -0.35
COLCA1-201ENST00000355430 KCNA4P22459 653 aa12.89□□□□□ -0.35
COLCA1-201ENST00000355430 FAF1Q9UNN5 650 aaPredicted RBP12.89□□□□□ -0.35
COLCA1-201ENST00000355430 CARNS1A5YM72 827 aa12.89□□□□□ -0.35
COLCA1-201ENST00000355430 ZBTB39O15060 712 aa12.89□□□□□ -0.35
COLCA1-201ENST00000355430 KCNN4O15554 427 aa12.89□□□□□ -0.35
COLCA1-201ENST00000355430 TGFB3P10600 412 aa12.89□□□□□ -0.35
COLCA1-201ENST00000355430 KRT4P19013 534 aa12.89□□□□□ -0.35
COLCA1-201ENST00000355430 PCSK1P29120 753 aa12.89□□□□□ -0.35
COLCA1-201ENST00000355430 ADORA2BP29275 332 aa12.89□□□□□ -0.35
COLCA1-201ENST00000355430 KRT33BQ14525 404 aa12.89□□□□□ -0.35
COLCA1-201ENST00000355430 SDE2Q6IQ49 451 aa12.89□□□□□ -0.35
COLCA1-201ENST00000355430 LRRC71Q8N4P6 559 aa12.89□□□□□ -0.35
COLCA1-201ENST00000355430 LNX1Q8TBB1 728 aaPredicted RBP12.89□□□□□ -0.35
COLCA1-201ENST00000355430 SLC26A7Q8TE54 656 aa12.89□□□□□ -0.35
COLCA1-201ENST00000355430 FGD4Q96M96 766 aa12.89□□□□□ -0.35
COLCA1-201ENST00000355430 WWP1Q9H0M0 922 aa12.89□□□□□ -0.35
COLCA1-201ENST00000355430 AGPSO00116 658 aa12.89□□□□□ -0.35
COLCA1-201ENST00000355430 GZMAP12544 262 aa12.89□□□□□ -0.35
COLCA1-201ENST00000355430 ST8SIA6P61647 398 aa12.89□□□□□ -0.35
COLCA1-201ENST00000355430 TLK2Q86UE8 772 aa12.89□□□□□ -0.35
COLCA1-201ENST00000355430 ZNF677Q86XU0 584 aa12.89□□□□□ -0.35
COLCA1-201ENST00000355430 FUKQ8N0W3 1084 aa12.89□□□□□ -0.35
COLCA1-201ENST00000355430 STAMBPL1Q96FJ0 436 aa12.89□□□□□ -0.35
COLCA1-201ENST00000355430 INPP4AQ96PE3 977 aaPredicted RBP12.89□□□□□ -0.35
COLCA1-201ENST00000355430 MANSC1Q9H8J5 431 aa12.89□□□□□ -0.35
COLCA1-201ENST00000355430 DDX4Q9NQI0 724 aaKnown RBP12.89□□□□□ -0.35
COLCA1-201ENST00000355430 TOPAZ1Q8N9V7 1692 aa12.88□□□□□ -0.35
COLCA1-201ENST00000355430 PFDN1O60925 122 aa12.88□□□□□ -0.35
COLCA1-201ENST00000355430 RARAP10276 462 aa12.88□□□□□ -0.35
COLCA1-201ENST00000355430 TSTA3Q13630 321 aaPredicted RBP12.88□□□□□ -0.35
COLCA1-201ENST00000355430 PIGHQ14442 188 aaPredicted RBP12.88□□□□□ -0.35
COLCA1-201ENST00000355430 COBLL1Q53SF7 1204 aa12.88□□□□□ -0.35
COLCA1-201ENST00000355430 CYP4A22Q5TCH4 519 aa12.88□□□□□ -0.35
COLCA1-201ENST00000355430 TEX9Q8N6V9 391 aa12.88□□□□□ -0.35
COLCA1-201ENST00000355430 TRIM56Q9BRZ2 755 aaKnown RBP12.88□□□□□ -0.35
COLCA1-201ENST00000355430 MOSPD1Q9UJG1 213 aa12.88□□□□□ -0.35
COLCA1-201ENST00000355430 EML1O00423 815 aa12.88□□□□□ -0.35
COLCA1-201ENST00000355430 PSTPIP1O43586 416 aa12.88□□□□□ -0.35
COLCA1-201ENST00000355430 URODP06132 367 aa12.88□□□□□ -0.35
COLCA1-201ENST00000355430 RRM1P23921 792 aa12.88□□□□□ -0.35
COLCA1-201ENST00000355430 GTF2H1P32780 548 aa12.88□□□□□ -0.35
COLCA1-201ENST00000355430 GEMIN4P57678 1058 aaKnown RBP12.88□□□□□ -0.35
COLCA1-201ENST00000355430 ZNF200P98182 395 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms