RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 FAM95CA0A1B0GW59 222 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 CFAP99D6REC4 459 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 CLASP2O75122 1294 aaKnown RBP13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 MKRN4PQ13434 485 aaPredicted RBP13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 SPDYAQ5MJ70 313 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 ACAD10Q6JQN1 1059 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 SHCBP1Q8NEM2 672 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 CCDC126Q96EE4 140 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 PGM2Q96G03 612 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 PLEKHA8Q96JA3 519 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 MMTAG2Q9BU76 263 aaKnown RBP13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 ZNF408Q9H9D4 720 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 TMEM8AQ9HCN3 771 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 GDF3Q9NR23 364 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 ZNF446Q9NWS9 450 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 ARHGEF40Q8TER5 1519 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 RIPK2O43353 540 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 SSTR3P32745 418 aaPredicted RBP13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 LAMC2Q13753 1193 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 PDK1Q15118 436 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 SNRNP35Q16560 246 aaKnown RBP13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 TMC3Q7Z5M5 1100 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 GABBR1Q9UBS5 961 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 TMEM191CA6NGB0 347 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 MYBP10242 640 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 YY1P25490 414 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 EFNA5P52803 228 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 KRT33BQ14525 404 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 STXBP2Q15833 593 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 AP5M1Q9H0R1 490 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 PLEKHA5Q9HAU0 1116 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 H2AFY2Q9P0M6 372 aaPredicted RBP13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 DNAJC16Q9Y2G8 782 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 DFFAO00273 331 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 FXR2P51116 673 aaKnown RBP eCLIP13.22□□□□□ -0.292e-9■■■■□ 20.8
SYNCRIP-201ENST00000355238 PDPK2PQ6A1A2 396 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 TTC23LQ6PF05 361 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 PAFAH2Q99487 392 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 COA1Q9GZY4 146 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 TUBGCP4Q9UGJ1 667 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 SFMBT1Q9UHJ3 866 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 LIN7AO14910 233 aaPredicted RBP13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 ATMINO43313 823 aaPredicted RBP13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 TFE3P19532 575 aaPredicted RBP13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 XRCC4Q13426 336 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 SEL1L3Q68CR1 1132 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 DPP9Q86TI2 863 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 ZNF513Q8N8E2 541 aaPredicted RBP13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 FAM71DQ8N9W8 422 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 FBXO36Q8NEA4 188 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 OTULINQ96BN8 352 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 ZBED2Q9BTP6 218 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 MAP3K13O43283 966 aa13.21□□□□□ -0.29
SYNCRIP-201ENST00000355238 CD44P16070 742 aaKnown RBP13.21□□□□□ -0.29
SYNCRIP-201ENST00000355238 EPHB2P29323 1055 aa13.21□□□□□ -0.29
SYNCRIP-201ENST00000355238 PRDX5P30044 214 aa13.21□□□□□ -0.29
SYNCRIP-201ENST00000355238 GRAPQ13588 217 aa13.21□□□□□ -0.29
SYNCRIP-201ENST00000355238 FAM83EQ2M2I3 478 aa13.21□□□□□ -0.29
SYNCRIP-201ENST00000355238 FLAD1Q8NFF5 587 aa13.21□□□□□ -0.29
SYNCRIP-201ENST00000355238 GRAPLQ8TC17 118 aaPredicted RBP13.21□□□□□ -0.29
SYNCRIP-201ENST00000355238 GH2P01242 217 aa13.21□□□□□ -0.29
SYNCRIP-201ENST00000355238 FDFT1P37268 417 aa13.21□□□□□ -0.29
SYNCRIP-201ENST00000355238 CLVS1Q8IUQ0 354 aaPredicted RBP13.21□□□□□ -0.29
SYNCRIP-201ENST00000355238 PPP1R16BQ96T49 567 aa13.21□□□□□ -0.29
SYNCRIP-201ENST00000355238 MTSS1O43312 755 aa13.21□□□□□ -0.29
SYNCRIP-201ENST00000355238 ADORA2BP29275 332 aa13.21□□□□□ -0.29
SYNCRIP-201ENST00000355238 ZNF235Q14590 738 aa13.21□□□□□ -0.29
SYNCRIP-201ENST00000355238 TRIP4Q15650 581 aaPredicted RBP13.21□□□□□ -0.29
SYNCRIP-201ENST00000355238 ANO4Q32M45 955 aa13.21□□□□□ -0.29
SYNCRIP-201ENST00000355238 AARS2Q5JTZ9 985 aaKnown RBP13.21□□□□□ -0.29
SYNCRIP-201ENST00000355238 SUSD4Q5VX71 490 aa13.21□□□□□ -0.29
SYNCRIP-201ENST00000355238 LRRC8DQ7L1W4 858 aa13.21□□□□□ -0.29
SYNCRIP-201ENST00000355238 CD302Q8IX05 232 aa13.21□□□□□ -0.29
SYNCRIP-201ENST00000355238 SH3TC2Q8TF17 1288 aa13.21□□□□□ -0.29
SYNCRIP-201ENST00000355238 SCFD2Q8WU76 684 aa13.21□□□□□ -0.29
SYNCRIP-201ENST00000355238 V9GYQ6 96 aa13.21□□□□□ -0.29
SYNCRIP-201ENST00000355238 DDR1Q08345 913 aa13.21□□□□□ -0.29
SYNCRIP-201ENST00000355238 PTK6Q13882 451 aa13.21□□□□□ -0.29
SYNCRIP-201ENST00000355238 TSHZ1Q6ZSZ6 1077 aa13.21□□□□□ -0.29
SYNCRIP-201ENST00000355238 DEFB107AQ8IZN7 70 aa13.21□□□□□ -0.29
SYNCRIP-201ENST00000355238 AGAP11Q8TF27 550 aa13.21□□□□□ -0.29
SYNCRIP-201ENST00000355238 TRIM8Q9BZR9 551 aa13.21□□□□□ -0.29
SYNCRIP-201ENST00000355238 DMAP1Q9NPF5 467 aaPredicted RBP13.21□□□□□ -0.29
SYNCRIP-201ENST00000355238 LMCD1Q9NZU5 365 aa13.21□□□□□ -0.29
SYNCRIP-201ENST00000355238 NAALADL1Q9UQQ1 740 aa13.21□□□□□ -0.29
SYNCRIP-201ENST00000355238 ANKARQ7Z5J8 1434 aa13.21□□□□□ -0.3
SYNCRIP-201ENST00000355238 PXDNLA1KZ92 1463 aa13.21□□□□□ -0.3
SYNCRIP-201ENST00000355238 MED26O95402 600 aa13.21□□□□□ -0.3
SYNCRIP-201ENST00000355238 TTKP33981 857 aa13.21□□□□□ -0.3
SYNCRIP-201ENST00000355238 SULT1E1P49888 294 aa13.21□□□□□ -0.3
SYNCRIP-201ENST00000355238 ANTXR2P58335 489 aa13.21□□□□□ -0.3
SYNCRIP-201ENST00000355238 SGSM1Q2NKQ1 1148 aa13.21□□□□□ -0.3
SYNCRIP-201ENST00000355238 ARMC4Q5T2S8 1044 aa13.21□□□□□ -0.3
SYNCRIP-201ENST00000355238 OR8H2Q8N162 312 aa13.21□□□□□ -0.3
SYNCRIP-201ENST00000355238 KYQ8NBH2 561 aa13.21□□□□□ -0.3
SYNCRIP-201ENST00000355238 USE1Q9NZ43 259 aa13.21□□□□□ -0.3
SYNCRIP-201ENST00000355238 CTNNAL1Q9UBT7 734 aa13.21□□□□□ -0.3
SYNCRIP-201ENST00000355238 A0A087WXM4 84 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 CYTH3O43739 400 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 ASNSP08243 561 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms