RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 ANKARQ7Z5J8 1434 aa10.4□□□□□ -0.74
COL11A1-201ENST00000353414 POLD3Q15054 466 aaPredicted RBP10.4□□□□□ -0.74
COL11A1-201ENST00000353414 CAPRIN2Q6IMN6 1127 aaKnown RBP10.4□□□□□ -0.74
COL11A1-201ENST00000353414 RDM1Q8NG50 284 aa10.4□□□□□ -0.74
COL11A1-201ENST00000353414 THUMPD3Q9BV44 507 aaKnown RBP10.4□□□□□ -0.74
COL11A1-201ENST00000353414 MRPL1Q9BYD6 325 aaKnown RBP10.4□□□□□ -0.74
COL11A1-201ENST00000353414 ZNRF3Q9ULT6 936 aa10.4□□□□□ -0.74
COL11A1-201ENST00000353414 CEP152O94986 1710 aa10.4□□□□□ -0.74
COL11A1-201ENST00000353414 RBBP8NLQ8NC74 664 aaPredicted RBP10.4□□□□□ -0.74
COL11A1-201ENST00000353414 RELTQ969Z4 430 aa10.4□□□□□ -0.74
COL11A1-201ENST00000353414 C9orf72Q96LT7 481 aa10.4□□□□□ -0.74
COL11A1-201ENST00000353414 SLITRK1Q96PX8 696 aa10.4□□□□□ -0.74
COL11A1-201ENST00000353414 CATSPERBQ9H7T0 1116 aa10.4□□□□□ -0.74
COL11A1-201ENST00000353414 PRKAB1Q9Y478 270 aa10.4□□□□□ -0.74
COL11A1-201ENST00000353414 TCOF1Q13428 1488 aaKnown RBP10.4□□□□□ -0.74
COL11A1-201ENST00000353414 LOC100653049A0A140TA62 436 aa10.4□□□□□ -0.74
COL11A1-201ENST00000353414 KRT34O76011 436 aa10.4□□□□□ -0.74
COL11A1-201ENST00000353414 SRP72O76094 671 aaKnown RBP10.4□□□□□ -0.74
COL11A1-201ENST00000353414 YWHAQP27348 245 aa10.4□□□□□ -0.74
COL11A1-201ENST00000353414 SERPINB5P36952 375 aa10.4□□□□□ -0.74
COL11A1-201ENST00000353414 PPP2R2AP63151 447 aa10.4□□□□□ -0.74
COL11A1-201ENST00000353414 GATAD2AQ86YP4 633 aa10.4□□□□□ -0.74
COL11A1-201ENST00000353414 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.4□□□□□ -0.74
COL11A1-201ENST00000353414 RUVBL2Q9Y230 463 aaKnown RBP10.4□□□□□ -0.74
COL11A1-201ENST00000353414 ENO4A6NNW6 628 aa10.4□□□□□ -0.75
COL11A1-201ENST00000353414 LGALS16A8MUM7 142 aa10.4□□□□□ -0.75
COL11A1-201ENST00000353414 RTN2O75298 545 aa10.4□□□□□ -0.75
COL11A1-201ENST00000353414 HIC1Q14526 733 aa10.4□□□□□ -0.75
COL11A1-201ENST00000353414 SNRNP35Q16560 246 aaKnown RBP10.4□□□□□ -0.75
COL11A1-201ENST00000353414 C3orf62Q6ZUJ4 267 aa10.4□□□□□ -0.75
COL11A1-201ENST00000353414 NT5DC4Q86YG4 428 aa10.4□□□□□ -0.75
COL11A1-201ENST00000353414 FAM20AQ96MK3 541 aa10.4□□□□□ -0.75
COL11A1-201ENST00000353414 CEP41Q9BYV8 373 aa10.4□□□□□ -0.75
COL11A1-201ENST00000353414 REXO4Q9GZR2 422 aaKnown RBP10.4□□□□□ -0.75
COL11A1-201ENST00000353414 TRABDQ9H4I3 376 aa10.4□□□□□ -0.75
COL11A1-201ENST00000353414 TUT1Q9H6E5 874 aaKnown RBP10.4□□□□□ -0.75
COL11A1-201ENST00000353414 DPP3Q9NY33 737 aa10.4□□□□□ -0.75
COL11A1-201ENST00000353414 SSH2Q76I76 1423 aa10.4□□□□□ -0.75
COL11A1-201ENST00000353414 CDC42BPGQ6DT37 1551 aa10.4□□□□□ -0.75
COL11A1-201ENST00000353414 KDM4FA0A1W2PPD8 638 aa10.4□□□□□ -0.75
COL11A1-201ENST00000353414 PER1O15534 1290 aaPredicted RBP10.4□□□□□ -0.75
COL11A1-201ENST00000353414 ANO5Q75V66 913 aa10.4□□□□□ -0.75
COL11A1-201ENST00000353414 TMC7Q7Z402 723 aa10.4□□□□□ -0.75
COL11A1-201ENST00000353414 GLT1D1Q96MS3 346 aa10.4□□□□□ -0.75
COL11A1-201ENST00000353414 SH3GL2Q99962 352 aa10.4□□□□□ -0.75
COL11A1-201ENST00000353414 USP27XA6NNY8 438 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 RGL2O15211 777 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 RNASEH1O60930 286 aaKnown RBP10.39□□□□□ -0.75
COL11A1-201ENST00000353414 DET1Q7L5Y6 550 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 ACOT1Q86TX2 421 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 CCDC60Q8IWA6 550 aaPredicted RBP10.39□□□□□ -0.75
COL11A1-201ENST00000353414 CYFIP2Q96F07 1278 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 SERAC1Q96JX3 654 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 NOP53Q9NZM5 478 aaKnown RBP10.39□□□□□ -0.75
COL11A1-201ENST00000353414 VTI1BQ9UEU0 232 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 POLG2Q9UHN1 485 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 TBKBP1A7MCY6 615 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 CHURC1-FNTBB4DL54 471 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 FAM200BP0CF97 657 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 MAP3K10Q02779 954 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 INPP5AQ14642 412 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 NFIL3Q16649 462 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 HIST2H2ACQ16777 129 aaPredicted RBP10.39□□□□□ -0.75
COL11A1-201ENST00000353414 RARS2Q5T160 578 aaKnown RBP10.39□□□□□ -0.75
COL11A1-201ENST00000353414 HIST2H2AA3Q6FI13 130 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 HDDC2Q7Z4H3 204 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 LEMD2Q8NC56 503 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.39□□□□□ -0.75
COL11A1-201ENST00000353414 RNF17Q9BXT8 1623 aaKnown RBP10.39□□□□□ -0.75
COL11A1-201ENST00000353414 LOC102724159A0A0B4J2E5 919 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 CBX4O00257 560 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 HSMCR30P0CW71 290 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 PWP2Q15269 919 aaKnown RBP10.39□□□□□ -0.75
COL11A1-201ENST00000353414 USP39Q53GS9 565 aaKnown RBP10.39□□□□□ -0.75
COL11A1-201ENST00000353414 CDC42EP5Q6NZY7 148 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 FBXO38Q6PIJ6 1188 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 RNASE11Q8TAA1 199 aaKnown RBP10.39□□□□□ -0.75
COL11A1-201ENST00000353414 GNG14A0A1W2PPG7 69 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 CLASP2O75122 1294 aaKnown RBP10.39□□□□□ -0.75
COL11A1-201ENST00000353414 AP1G2O75843 785 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 EPHB2P29323 1055 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 MARSP56192 900 aaKnown RBP10.39□□□□□ -0.75
COL11A1-201ENST00000353414 IRAK1BP1Q5VVH5 260 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 C9orf131Q5VYM1 1079 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 TRMT11Q7Z4G4 463 aaKnown RBP10.39□□□□□ -0.75
COL11A1-201ENST00000353414 TFAP2DQ7Z6R9 452 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 PRPF39Q86UA1 669 aaKnown RBP10.39□□□□□ -0.75
COL11A1-201ENST00000353414 CYP4X1Q8N118 509 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 RNPC3Q96LT9 517 aaKnown RBP10.39□□□□□ -0.75
COL11A1-201ENST00000353414 ECSITQ9BQ95 431 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 NT5C1AQ9BXI3 368 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 TMEM39AQ9NV64 488 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 GPATCH2LQ9NWQ4 482 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 AXIN2Q9Y2T1 843 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 COPG1Q9Y678 874 aaKnown RBP10.39□□□□□ -0.75
COL11A1-201ENST00000353414 IGSF1Q8N6C5 1336 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 GTF2E2P29084 291 aaKnown RBP10.39□□□□□ -0.75
COL11A1-201ENST00000353414 SERPINB3P29508 390 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 NR1H3Q13133 447 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 SNRNP27Q8WVK2 155 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms