RNA–Protein interactions for RNA: ENST00000353278.8

SLC6A20-201, Transcript of solute carrier family 6 member 20, humanhuman

TSL 1 (best) BASIC

Gene SLC6A20, Length 5,247 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-201ENST00000353278 SENP6Q9GZR1 1112 aaPredicted RBP11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 NDE1Q9NXR1 346 aa11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 STX18Q9P2W9 335 aaKnown RBP11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 CASTOR2A6NHX0 329 aa11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 CHUKO15111 745 aa11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 CHRM3P20309 590 aa11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 SHMT1P34896 483 aa11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 FKBP1BP68106 108 aa11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 SNCBQ16143 134 aa11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 CARNMT1Q8N4J0 409 aa11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 CYP3A43Q9HB55 503 aa11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 VPS28Q9UK41 221 aa11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 USP32Q8NFA0 1604 aa11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 FAM47DPA6NHR8 397 aa11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 POLBP06746 335 aa11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 CKBP12277 381 aa11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 AXLP30530 894 aa11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 SPRP35270 261 aaPredicted RBP11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 PTGER2P43116 358 aa11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 PPP3CCP48454 512 aa11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 LAMTOR4Q0VGL1 99 aa11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 EFEMP1Q12805 493 aa11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 BYSLQ13895 437 aaKnown RBP11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 Q4G0T1 1027 aa11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 USP49Q70CQ1 688 aa11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 PATL1Q86TB9 770 aaKnown RBP11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 UBXN6Q9BZV1 441 aa11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 CD274Q9NZQ7 290 aa11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 ZMYM2Q9UBW7 1377 aa11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 C2orf81A6NN90 581 aa11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 TMEM253P0C7T8 217 aa11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 VGLL4Q14135 290 aa11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 HIST2H2ACQ16777 129 aaPredicted RBP11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 GRAMD1BQ3KR37 738 aa11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 HIST2H2AA3Q6FI13 130 aa11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 ANKMY2Q8IV38 441 aa11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 SNX31Q8N9S9 440 aa11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 SKA1Q96BD8 255 aa11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 NR1H4Q96RI1 486 aaPredicted RBP11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 C20orf96Q9NUD7 363 aaPredicted RBP11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 DBR1Q9UK59 544 aaKnown RBP11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 TRPV2Q9Y5S1 764 aa11.72□□□□□ -0.53
SLC6A20-201ENST00000353278 A0A1B0GTH6 734 aa11.71□□□□□ -0.53
SLC6A20-201ENST00000353278 MED24O75448 989 aa11.71□□□□□ -0.53
SLC6A20-201ENST00000353278 POMCP01189 267 aa11.71□□□□□ -0.53
SLC6A20-201ENST00000353278 GEMP55040 296 aa11.71□□□□□ -0.53
SLC6A20-201ENST00000353278 PDE1CQ14123 709 aaPredicted RBP11.71□□□□□ -0.53
SLC6A20-201ENST00000353278 TMEM199Q8N511 208 aa11.71□□□□□ -0.53
SLC6A20-201ENST00000353278 MFSD1Q9H3U5 465 aa11.71□□□□□ -0.53
SLC6A20-201ENST00000353278 GYG2O15488 501 aa11.71□□□□□ -0.53
SLC6A20-201ENST00000353278 SPAG6O75602 509 aa11.71□□□□□ -0.53
SLC6A20-201ENST00000353278 RHOCP08134 193 aa11.71□□□□□ -0.53
SLC6A20-201ENST00000353278 MCF2P10911 925 aa11.71□□□□□ -0.53
SLC6A20-201ENST00000353278 PHKG1Q16816 387 aa11.71□□□□□ -0.53
SLC6A20-201ENST00000353278 CBWD2Q8IUF1 395 aa11.71□□□□□ -0.53
SLC6A20-201ENST00000353278 THOC1Q96FV9 657 aaKnown RBP11.71□□□□□ -0.53
SLC6A20-201ENST00000353278 AMACRQ9UHK6 382 aa11.71□□□□□ -0.53
SLC6A20-201ENST00000353278 ESYT3A0FGR9 886 aa11.71□□□□□ -0.54
SLC6A20-201ENST00000353278 TARSL2A2RTX5 802 aaKnown RBP11.71□□□□□ -0.54
SLC6A20-201ENST00000353278 ARFIP2P53365 341 aa11.71□□□□□ -0.54
SLC6A20-201ENST00000353278 CCDC144BQ3MJ40 725 aa11.71□□□□□ -0.54
SLC6A20-201ENST00000353278 AARS2Q5JTZ9 985 aaKnown RBP11.71□□□□□ -0.54
SLC6A20-201ENST00000353278 RASIP1Q5U651 963 aa11.71□□□□□ -0.54
SLC6A20-201ENST00000353278 KLHDC7AQ5VTJ3 777 aa11.71□□□□□ -0.54
SLC6A20-201ENST00000353278 CES5AQ6NT32 575 aa11.71□□□□□ -0.54
SLC6A20-201ENST00000353278 SLC27A1Q6PCB7 646 aa11.71□□□□□ -0.54
SLC6A20-201ENST00000353278 HIPK4Q8NE63 616 aa11.71□□□□□ -0.54
SLC6A20-201ENST00000353278 FOXP3Q9BZS1 431 aa11.71□□□□□ -0.54
SLC6A20-201ENST00000353278 RIOX1Q9H6W3 641 aa11.71□□□□□ -0.54
SLC6A20-201ENST00000353278 TLR8Q9NR97 1041 aaKnown RBP11.71□□□□□ -0.54
SLC6A20-201ENST00000353278 XPO7Q9UIA9 1087 aaKnown RBP11.71□□□□□ -0.54
SLC6A20-201ENST00000353278 ITIH6Q6UXX5 1313 aa11.71□□□□□ -0.54
SLC6A20-201ENST00000353278 HAUS5O94927 633 aa11.71□□□□□ -0.54
SLC6A20-201ENST00000353278 GEMIN4P57678 1058 aaKnown RBP11.71□□□□□ -0.54
SLC6A20-201ENST00000353278 ZNF410Q86VK4 478 aa11.71□□□□□ -0.54
SLC6A20-201ENST00000353278 WDR49Q8IV35 697 aa11.71□□□□□ -0.54
SLC6A20-201ENST00000353278 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.71□□□□□ -0.54
SLC6A20-201ENST00000353278 ADA2Q9NZK5 511 aa11.71□□□□□ -0.54
SLC6A20-201ENST00000353278 TPX2Q9ULW0 747 aaKnown RBP11.71□□□□□ -0.54
SLC6A20-201ENST00000353278 SUFUQ9UMX1 484 aa11.71□□□□□ -0.54
SLC6A20-201ENST00000353278 PHF2O75151 1096 aa11.7□□□□□ -0.54
SLC6A20-201ENST00000353278 PTPRAP18433 802 aa11.7□□□□□ -0.54
SLC6A20-201ENST00000353278 FAM171A1Q5VUB5 890 aa11.7□□□□□ -0.54
SLC6A20-201ENST00000353278 TIGD7Q6NT04 549 aaPredicted RBP11.7□□□□□ -0.54
SLC6A20-201ENST00000353278 UGT3A1Q6NUS8 523 aa11.7□□□□□ -0.54
SLC6A20-201ENST00000353278 UNC45BQ8IWX7 931 aa11.7□□□□□ -0.54
SLC6A20-201ENST00000353278 TMC2Q8TDI7 906 aa11.7□□□□□ -0.54
SLC6A20-201ENST00000353278 FBXO44Q9H4M3 255 aa11.7□□□□□ -0.54
SLC6A20-201ENST00000353278 KIF17Q9P2E2 1029 aa11.7□□□□□ -0.54
SLC6A20-201ENST00000353278 PMPCBO75439 489 aa11.7□□□□□ -0.54
SLC6A20-201ENST00000353278 ATP1A1P05023 1023 aaKnown RBP11.7□□□□□ -0.54
SLC6A20-201ENST00000353278 ITIH2P19823 946 aa11.7□□□□□ -0.54
SLC6A20-201ENST00000353278 MAGOHP61326 146 aaKnown RBP11.7□□□□□ -0.54
SLC6A20-201ENST00000353278 MTA1Q13330 715 aa11.7□□□□□ -0.54
SLC6A20-201ENST00000353278 EPC2Q52LR7 807 aa11.7□□□□□ -0.54
SLC6A20-201ENST00000353278 PPM1LQ5SGD2 360 aa11.7□□□□□ -0.54
SLC6A20-201ENST00000353278 TAGAPQ8N103 731 aa11.7□□□□□ -0.54
SLC6A20-201ENST00000353278 FAM163AQ96GL9 167 aaPredicted RBP11.7□□□□□ -0.54
SLC6A20-201ENST00000353278 SYT15Q9BQS2 421 aa11.7□□□□□ -0.54
SLC6A20-201ENST00000353278 GTF3C4Q9UKN8 822 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms