RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 ABL1P00519 1130 aa8.83□□□□□ -1
CD44-205ENST00000352818 TGFB3P10600 412 aa8.83□□□□□ -1
CD44-205ENST00000352818 CTSAP10619 480 aa8.83□□□□□ -1
CD44-205ENST00000352818 CA8P35219 290 aa8.83□□□□□ -1
CD44-205ENST00000352818 SMTNP53814 917 aa8.83□□□□□ -1
CD44-205ENST00000352818 NRLP54845 237 aa8.83□□□□□ -1
CD44-205ENST00000352818 MYL7Q01449 175 aa8.83□□□□□ -1
CD44-205ENST00000352818 SATB1Q01826 763 aa8.83□□□□□ -1
CD44-205ENST00000352818 PPFIA1Q13136 1202 aa8.83□□□□□ -1
CD44-205ENST00000352818 DMP1Q13316 513 aaPredicted RBP8.83□□□□□ -1
CD44-205ENST00000352818 GAS6Q14393 721 aa8.83□□□□□ -1
CD44-205ENST00000352818 HSP90AA2PQ14568 343 aaPredicted RBP8.83□□□□□ -1
CD44-205ENST00000352818 GRIK4Q16099 956 aa8.83□□□□□ -1
CD44-205ENST00000352818 SLC18A3Q16572 532 aa8.83□□□□□ -1
CD44-205ENST00000352818 TDRD12Q587J7 1177 aaKnown RBP8.83□□□□□ -1
CD44-205ENST00000352818 UTP14CQ5TAP6 766 aaKnown RBP8.83□□□□□ -1
CD44-205ENST00000352818 PLA2G4FQ68DD2 849 aa8.83□□□□□ -1
CD44-205ENST00000352818 TCEAL6Q6IPX3 200 aa8.83□□□□□ -1
CD44-205ENST00000352818 KCNV1Q6PIU1 500 aa8.83□□□□□ -1
CD44-205ENST00000352818 SLC24A5Q71RS6 500 aa8.83□□□□□ -1
CD44-205ENST00000352818 HAUS6Q7Z4H7 955 aa8.83□□□□□ -1
CD44-205ENST00000352818 RNF10Q8N5U6 811 aaKnown RBP8.83□□□□□ -1
CD44-205ENST00000352818 XXYLT1Q8NBI6 393 aa8.83□□□□□ -1
CD44-205ENST00000352818 LRRN4CLQ8ND94 238 aa8.83□□□□□ -1
CD44-205ENST00000352818 TMEM161BQ8NDZ6 487 aa8.83□□□□□ -1
CD44-205ENST00000352818 UBXN4Q92575 508 aa8.83□□□□□ -1
CD44-205ENST00000352818 RABGGTAQ92696 567 aa8.83□□□□□ -1
CD44-205ENST00000352818 TCEAL3Q969E4 200 aa8.83□□□□□ -1
CD44-205ENST00000352818 CRELD1Q96HD1 420 aa8.83□□□□□ -1
CD44-205ENST00000352818 CEP170P1Q96L14 293 aa8.83□□□□□ -1
CD44-205ENST00000352818 KLHL5Q96PQ7 755 aa8.83□□□□□ -1
CD44-205ENST00000352818 CRACR2AQ9BSW2 395 aa8.83□□□□□ -1
CD44-205ENST00000352818 RHOBTB2Q9BYZ6 727 aa8.83□□□□□ -1
CD44-205ENST00000352818 LACRTQ9GZZ8 138 aa8.83□□□□□ -1
CD44-205ENST00000352818 CHRDQ9H2X0 955 aa8.83□□□□□ -1
CD44-205ENST00000352818 MLXIPQ9HAP2 919 aa8.83□□□□□ -1
CD44-205ENST00000352818 CDHR5Q9HBB8 845 aa8.83□□□□□ -1
CD44-205ENST00000352818 ATP6V0A4Q9HBG4 840 aa8.83□□□□□ -1
CD44-205ENST00000352818 NLRC4Q9NPP4 1024 aa8.83□□□□□ -1
CD44-205ENST00000352818 TRIM10Q9UDY6 481 aa8.83□□□□□ -1
CD44-205ENST00000352818 NENFQ9UMX5 172 aa8.83□□□□□ -1
CD44-205ENST00000352818 NOC2LQ9Y3T9 749 aaKnown RBP8.83□□□□□ -1
CD44-205ENST00000352818 TRPV2Q9Y5S1 764 aa8.83□□□□□ -1
CD44-205ENST00000352818 FHOD1Q9Y613 1164 aa8.83□□□□□ -1
CD44-205ENST00000352818 ACACAQ13085 2346 aa8.83□□□□□ -1
CD44-205ENST00000352818 UBR5O95071 2799 aaPredicted RBP8.82□□□□□ -1
CD44-205ENST00000352818 EIF4E1BA6NMX2 242 aaKnown RBP8.82□□□□□ -1
CD44-205ENST00000352818 AXIN1O15169 862 aa8.82□□□□□ -1
CD44-205ENST00000352818 OATP04181 439 aa8.82□□□□□ -1
CD44-205ENST00000352818 CNPP09543 421 aaKnown RBP8.82□□□□□ -1
CD44-205ENST00000352818 KRT13P13646 458 aa8.82□□□□□ -1
CD44-205ENST00000352818 PRLRP16471 622 aa8.82□□□□□ -1
CD44-205ENST00000352818 FERP16591 822 aa8.82□□□□□ -1
CD44-205ENST00000352818 RFC5P40937 340 aa8.82□□□□□ -1
CD44-205ENST00000352818 MAGEA1P43355 309 aa8.82□□□□□ -1
CD44-205ENST00000352818 NPTX2P47972 431 aa8.82□□□□□ -1
CD44-205ENST00000352818 CYP2J2P51589 502 aa8.82□□□□□ -1
CD44-205ENST00000352818 NPEPPSP55786 919 aa8.82□□□□□ -1
CD44-205ENST00000352818 CYP27A1Q02318 531 aa8.82□□□□□ -1
CD44-205ENST00000352818 CKAP4Q07065 602 aaKnown RBP8.82□□□□□ -1
CD44-205ENST00000352818 KLHL30Q0D2K2 578 aa8.82□□□□□ -1
CD44-205ENST00000352818 RAPGEF1Q13905 1077 aa8.82□□□□□ -1
CD44-205ENST00000352818 NEDD9Q14511 834 aa8.82□□□□□ -1
CD44-205ENST00000352818 DSC3Q14574 896 aa8.82□□□□□ -1
CD44-205ENST00000352818 NAA30Q147X3 362 aaPredicted RBP8.82□□□□□ -1
CD44-205ENST00000352818 ERCC6LQ2NKX8 1250 aa8.82□□□□□ -1
CD44-205ENST00000352818 CLLU1OSQ5K130 101 aa8.82□□□□□ -1
CD44-205ENST00000352818 TCERG1LQ5VWI1 586 aa8.82□□□□□ -1
CD44-205ENST00000352818 RSPO2Q6UXX9 243 aaPredicted RBP8.82□□□□□ -1
CD44-205ENST00000352818 IRF2BP2Q7Z5L9 587 aa8.82□□□□□ -1
CD44-205ENST00000352818 RSPH3Q86UC2 560 aa8.82□□□□□ -1
CD44-205ENST00000352818 KSR1Q8IVT5 923 aa8.82□□□□□ -1
CD44-205ENST00000352818 CCDC60Q8IWA6 550 aaPredicted RBP8.82□□□□□ -1
CD44-205ENST00000352818 C12orf50Q8NA57 414 aaPredicted RBP8.82□□□□□ -1
CD44-205ENST00000352818 HNRNPLLQ8WVV9 542 aaKnown RBP8.82□□□□□ -1
CD44-205ENST00000352818 LRIG1Q96JA1 1093 aa8.82□□□□□ -1
CD44-205ENST00000352818 ALS2CR12Q96Q35 445 aa8.82□□□□□ -1
CD44-205ENST00000352818 SPAG5Q96R06 1193 aa8.82□□□□□ -1
CD44-205ENST00000352818 NIFKQ9BYG3 293 aaKnown RBP8.82□□□□□ -1
CD44-205ENST00000352818 POLD4Q9HCU8 107 aa8.82□□□□□ -1
CD44-205ENST00000352818 XPNPEP1Q9NQW7 623 aa8.82□□□□□ -1
CD44-205ENST00000352818 C2orf42Q9NWW7 574 aa8.82□□□□□ -1
CD44-205ENST00000352818 TMEM161AQ9NX61 479 aa8.82□□□□□ -1
CD44-205ENST00000352818 HSPBP1Q9NZL4 362 aa8.82□□□□□ -1
CD44-205ENST00000352818 ARHGAP28Q9P2N2 729 aa8.82□□□□□ -1
CD44-205ENST00000352818 INTUQ9ULD6 942 aa8.82□□□□□ -1
CD44-205ENST00000352818 TBX20Q9UMR3 447 aa8.82□□□□□ -1
CD44-205ENST00000352818 JRKLQ9Y4A0 524 aa8.82□□□□□ -1
CD44-205ENST00000352818 MAFBQ9Y5Q3 323 aaPredicted RBP8.82□□□□□ -1
CD44-205ENST00000352818 RELNP78509 3460 aa8.81□□□□□ -1
CD44-205ENST00000352818 CCDC195A0A1B0GUA6 201 aa8.81□□□□□ -1
CD44-205ENST00000352818 TMEM150BA6NC51 233 aa8.81□□□□□ -1
CD44-205ENST00000352818 K7ESF4 209 aa8.81□□□□□ -1
CD44-205ENST00000352818 KIAA0391O15091 583 aaKnown RBP8.81□□□□□ -1
CD44-205ENST00000352818 SLC16A4O15374 487 aa8.81□□□□□ -1
CD44-205ENST00000352818 KRT38O76015 456 aa8.81□□□□□ -1
CD44-205ENST00000352818 PIGRP01833 764 aa8.81□□□□□ -1
CD44-205ENST00000352818 CCDC172P0C7W6 258 aa8.81□□□□□ -1
CD44-205ENST00000352818 SLC9A1P19634 815 aa8.81□□□□□ -1
CD44-205ENST00000352818 GARTP22102 1010 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms