RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 PATE3B3GLJ2 98 aa17.02■□□□□ 0.32
COPE-202ENST00000349893 UPK3BL2E5RIL1 263 aa17.02■□□□□ 0.32
COPE-202ENST00000349893 PIRO00625 290 aa17.02■□□□□ 0.32
COPE-202ENST00000349893 CAPNS1P04632 268 aa17.02■□□□□ 0.32
COPE-202ENST00000349893 HAPLN1P10915 354 aaPredicted RBP17.02■□□□□ 0.32
COPE-202ENST00000349893 PLS3P13797 630 aa17.02■□□□□ 0.32
COPE-202ENST00000349893 GBP1P32455 592 aa17.02■□□□□ 0.32
COPE-202ENST00000349893 TNFSF9P41273 254 aa17.02■□□□□ 0.32
COPE-202ENST00000349893 TRAPPC10P48553 1259 aa17.02■□□□□ 0.32
COPE-202ENST00000349893 GUCY2FP51841 1108 aa17.02■□□□□ 0.32
COPE-202ENST00000349893 IRX4P78413 519 aa17.02■□□□□ 0.32
COPE-202ENST00000349893 BFSP1Q12934 665 aa17.02■□□□□ 0.32
COPE-202ENST00000349893 ENOX2Q16206 610 aaKnown RBP17.02■□□□□ 0.32
COPE-202ENST00000349893 CYP2U1Q7Z449 544 aa17.02■□□□□ 0.32
COPE-202ENST00000349893 MON1AQ86VX9 555 aa17.02■□□□□ 0.32
COPE-202ENST00000349893 CPA6Q8N4T0 437 aa17.02■□□□□ 0.32
COPE-202ENST00000349893 DEFB124Q8NES8 71 aa17.02■□□□□ 0.32
COPE-202ENST00000349893 CCDC26Q8TAB7 109 aa17.02■□□□□ 0.32
COPE-202ENST00000349893 SPPL2BQ8TCT7 592 aa17.02■□□□□ 0.32
COPE-202ENST00000349893 SNX29Q8TEQ0 813 aa17.02■□□□□ 0.32
COPE-202ENST00000349893 CD101Q93033 1021 aa17.02■□□□□ 0.32
COPE-202ENST00000349893 CNOT6LQ96LI5 555 aaKnown RBP17.02■□□□□ 0.32
COPE-202ENST00000349893 FOXP1Q9H334 677 aaPredicted RBP17.02■□□□□ 0.32
COPE-202ENST00000349893 DSEQ9UL01 958 aa17.02■□□□□ 0.32
COPE-202ENST00000349893 MYH11P35749 1972 aa17.01■□□□□ 0.31
COPE-202ENST00000349893 ANO9A1A5B4 782 aa17.01■□□□□ 0.31
COPE-202ENST00000349893 SFI1A8K8P3 1242 aa17.01■□□□□ 0.31
COPE-202ENST00000349893 BCKDHBP21953 392 aa17.01■□□□□ 0.31
COPE-202ENST00000349893 NMT1P30419 496 aaKnown RBP17.01■□□□□ 0.31
COPE-202ENST00000349893 DGKEP52429 567 aa17.01■□□□□ 0.31
COPE-202ENST00000349893 FOSBP53539 338 aa17.01■□□□□ 0.31
COPE-202ENST00000349893 SAFBQ15424 915 aaKnown RBP eCLIP17.01■□□□□ 0.31
COPE-202ENST00000349893 TTC38Q5R3I4 469 aa17.01■□□□□ 0.31
COPE-202ENST00000349893 TXNDC8Q6A555 127 aa17.01■□□□□ 0.31
COPE-202ENST00000349893 CC2D1AQ6P1N0 951 aaPredicted RBP17.01■□□□□ 0.31
COPE-202ENST00000349893 PIP4P1Q86T03 277 aa17.01■□□□□ 0.31
COPE-202ENST00000349893 LRRTM3Q86VH5 581 aa17.01■□□□□ 0.31
COPE-202ENST00000349893 TSTD1Q8NFU3 115 aa17.01■□□□□ 0.31
COPE-202ENST00000349893 OLIG1Q8TAK6 271 aa17.01■□□□□ 0.31
COPE-202ENST00000349893 GIPC2Q8TF65 315 aa17.01■□□□□ 0.31
COPE-202ENST00000349893 OSCP1Q8WVF1 389 aa17.01■□□□□ 0.31
COPE-202ENST00000349893 SCN1AP35498 2009 aa17.01■□□□□ 0.31
COPE-202ENST00000349893 HYAL3O43820 417 aaPredicted RBP17■□□□□ 0.31
COPE-202ENST00000349893 U2AF2P26368 475 aaKnown RBP eCLIP17■□□□□ 0.31
COPE-202ENST00000349893 CDC25AP30304 524 aa17■□□□□ 0.31
COPE-202ENST00000349893 SMTNP53814 917 aa17■□□□□ 0.31
COPE-202ENST00000349893 ANAPC15P60006 121 aa17■□□□□ 0.31
COPE-202ENST00000349893 LMAN2Q12907 356 aa17■□□□□ 0.31
COPE-202ENST00000349893 MTF1Q14872 753 aa17■□□□□ 0.31
COPE-202ENST00000349893 ZNF77Q15935 545 aa17■□□□□ 0.31
COPE-202ENST00000349893 TAF12Q16514 161 aa17■□□□□ 0.31
COPE-202ENST00000349893 C9orf57Q5W0N0 161 aa17■□□□□ 0.31
COPE-202ENST00000349893 KCNK18Q7Z418 384 aa17■□□□□ 0.31
COPE-202ENST00000349893 CD302Q8IX05 232 aa17■□□□□ 0.31
COPE-202ENST00000349893 USP33Q8TEY7 942 aa17■□□□□ 0.31
COPE-202ENST00000349893 ATP2A3Q93084 1043 aa17■□□□□ 0.31
COPE-202ENST00000349893 CCSER1Q9C0I3 900 aa17■□□□□ 0.31
COPE-202ENST00000349893 PLXND1Q9Y4D7 1925 aa17■□□□□ 0.31
COPE-202ENST00000349893 TADA3O75528 432 aa16.99■□□□□ 0.31
COPE-202ENST00000349893 PIGRP01833 764 aa16.99■□□□□ 0.31
COPE-202ENST00000349893 FAM160A1Q05DH4 1040 aa16.99■□□□□ 0.31
COPE-202ENST00000349893 USP4Q13107 963 aa16.99■□□□□ 0.31
COPE-202ENST00000349893 EML3Q32P44 896 aa16.99■□□□□ 0.31
COPE-202ENST00000349893 MRPS31Q92665 395 aaKnown RBP16.99■□□□□ 0.31
COPE-202ENST00000349893 MMTAG2Q9BU76 263 aaKnown RBP16.99■□□□□ 0.31
COPE-202ENST00000349893 RAB34Q9BZG1 259 aa16.99■□□□□ 0.31
COPE-202ENST00000349893 SLC32A1Q9H598 525 aa16.99■□□□□ 0.31
COPE-202ENST00000349893 KLK13Q9UKR3 277 aa16.99■□□□□ 0.31
COPE-202ENST00000349893 INVSQ9Y283 1065 aa16.99■□□□□ 0.31
COPE-202ENST00000349893 DERAQ9Y315 318 aa16.99■□□□□ 0.31
COPE-202ENST00000349893 H0YCG3 227 aa16.98■□□□□ 0.31
COPE-202ENST00000349893 TNFRSF10BO14763 440 aa16.98■□□□□ 0.31
COPE-202ENST00000349893 OGTO15294 1046 aa16.98■□□□□ 0.31
COPE-202ENST00000349893 TCF3P15923 654 aa16.98■□□□□ 0.31
COPE-202ENST00000349893 PI4KAP42356 2102 aa16.98■□□□□ 0.31
COPE-202ENST00000349893 NCKAP1LP55160 1127 aa16.98■□□□□ 0.31
COPE-202ENST00000349893 ST3GAL1Q11201 340 aa16.98■□□□□ 0.31
COPE-202ENST00000349893 SEMA3BQ13214 749 aa16.98■□□□□ 0.31
COPE-202ENST00000349893 KRT79Q5XKE5 535 aa16.98■□□□□ 0.31
COPE-202ENST00000349893 JADE1Q6IE81 842 aa16.98■□□□□ 0.31
COPE-202ENST00000349893 KIAA1211LQ6NV74 962 aa16.98■□□□□ 0.31
COPE-202ENST00000349893 KCTD17Q8N5Z5 321 aa16.98■□□□□ 0.31
COPE-202ENST00000349893 MDGA1Q8NFP4 955 aa16.98■□□□□ 0.31
COPE-202ENST00000349893 TRMT2BQ96GJ1 504 aaKnown RBP16.98■□□□□ 0.31
COPE-202ENST00000349893 MYRFLQ96LU7 910 aa16.98■□□□□ 0.31
COPE-202ENST00000349893 TPSD1Q9BZJ3 242 aa16.98■□□□□ 0.31
COPE-202ENST00000349893 TMEM206Q9H813 350 aa16.98■□□□□ 0.31
COPE-202ENST00000349893 RPF1Q9H9Y2 349 aaKnown RBP16.98■□□□□ 0.31
COPE-202ENST00000349893 DUS2Q9NX74 493 aaKnown RBP16.98■□□□□ 0.31
COPE-202ENST00000349893 KCND2Q9NZV8 630 aa16.98■□□□□ 0.31
COPE-202ENST00000349893 CPSF3Q9UKF6 684 aaKnown RBP16.98■□□□□ 0.31
COPE-202ENST00000349893 MMP17Q9ULZ9 603 aa16.98■□□□□ 0.31
COPE-202ENST00000349893 CELSR3Q9NYQ7 3312 aa16.98■□□□□ 0.31
COPE-202ENST00000349893 ADAMTS20P59510 1910 aa16.98■□□□□ 0.31
COPE-202ENST00000349893 A0A0B4J269 797 aa16.97■□□□□ 0.31
COPE-202ENST00000349893 PP2D1A8MPX8 630 aa16.97■□□□□ 0.31
COPE-202ENST00000349893 K7EQS6 105 aa16.97■□□□□ 0.31
COPE-202ENST00000349893 NFICP08651 508 aa16.97■□□□□ 0.31
COPE-202ENST00000349893 CSH1P0DML2 217 aa16.97■□□□□ 0.31
COPE-202ENST00000349893 CSH2P0DML3 217 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms