RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 PRR5-ARHGAP8B1AHC4 643 aa15.91■□□□□ 0.14
PTBP1-201ENST00000349038 CYB561D2O14569 222 aa15.91■□□□□ 0.14
PTBP1-201ENST00000349038 SPATA31C1P0DKV0 1188 aa15.91■□□□□ 0.14
PTBP1-201ENST00000349038 ARHGAP8P85298 464 aa15.91■□□□□ 0.14
PTBP1-201ENST00000349038 PDK3Q15120 406 aa15.91■□□□□ 0.14
PTBP1-201ENST00000349038 CCDC89Q8N998 374 aa15.91■□□□□ 0.14
PTBP1-201ENST00000349038 CSRNP1Q96S65 589 aa15.91■□□□□ 0.14
PTBP1-201ENST00000349038 C11orf70Q9BRQ4 267 aa15.91■□□□□ 0.14
PTBP1-201ENST00000349038 APOL6Q9BWW8 343 aa15.91■□□□□ 0.14
PTBP1-201ENST00000349038 GPR88Q9GZN0 384 aa15.91■□□□□ 0.14
PTBP1-201ENST00000349038 TMCO1Q9UM00 188 aa15.91■□□□□ 0.14
PTBP1-201ENST00000349038 PCDHA1Q9Y5I3 950 aa15.91■□□□□ 0.14
PTBP1-201ENST00000349038 C10orf71Q711Q0 1435 aa15.91■□□□□ 0.14
PTBP1-201ENST00000349038 GAKO14976 1311 aa15.91■□□□□ 0.14
PTBP1-201ENST00000349038 KCNQ2O43526 872 aa15.91■□□□□ 0.14
PTBP1-201ENST00000349038 ARHGAP4P98171 946 aa15.91■□□□□ 0.14
PTBP1-201ENST00000349038 CETN1Q12798 172 aa15.91■□□□□ 0.14
PTBP1-201ENST00000349038 SIX1Q15475 284 aaPredicted RBP15.91■□□□□ 0.14
PTBP1-201ENST00000349038 CLUL1Q15846 466 aa15.91■□□□□ 0.14
PTBP1-201ENST00000349038 CTC1Q2NKJ3 1217 aa15.91■□□□□ 0.14
PTBP1-201ENST00000349038 SH3D19Q5HYK7 790 aa15.91■□□□□ 0.14
PTBP1-201ENST00000349038 C11orf63Q6NUN7 778 aa15.91■□□□□ 0.14
PTBP1-201ENST00000349038 TPTE2Q6XPS3 522 aa15.91■□□□□ 0.14
PTBP1-201ENST00000349038 RBM12BQ8IXT5 1001 aaKnown RBP15.91■□□□□ 0.14
PTBP1-201ENST00000349038 SLFN12Q8IYM2 578 aa15.91■□□□□ 0.14
PTBP1-201ENST00000349038 PPP2R3CQ969Q6 453 aa15.91■□□□□ 0.14
PTBP1-201ENST00000349038 IWS1Q96ST2 819 aa15.91■□□□□ 0.14
PTBP1-201ENST00000349038 MIS12Q9H081 205 aa15.91■□□□□ 0.14
PTBP1-201ENST00000349038 DNPEPQ9ULA0 475 aa15.91■□□□□ 0.14
PTBP1-201ENST00000349038 ZMYM2Q9UBW7 1377 aa15.9■□□□□ 0.14
PTBP1-201ENST00000349038 FAM155BO75949 473 aa15.9■□□□□ 0.14
PTBP1-201ENST00000349038 PCSK6P29122 969 aa15.9■□□□□ 0.14
PTBP1-201ENST00000349038 MAGEA8P43361 318 aa15.9■□□□□ 0.14
PTBP1-201ENST00000349038 AQP5P55064 265 aa15.9■□□□□ 0.14
PTBP1-201ENST00000349038 YWHAGP61981 247 aaKnown RBP eCLIP15.9■□□□□ 0.14
PTBP1-201ENST00000349038 NFIXQ14938 502 aa15.9■□□□□ 0.14
PTBP1-201ENST00000349038 C16orf72Q14CZ0 275 aa15.9■□□□□ 0.14
PTBP1-201ENST00000349038 RNF169Q8NCN4 708 aa15.9■□□□□ 0.14
PTBP1-201ENST00000349038 ETNPPLQ8TBG4 499 aa15.9■□□□□ 0.14
PTBP1-201ENST00000349038 SENP7Q9BQF6 1050 aa15.9■□□□□ 0.14
PTBP1-201ENST00000349038 DCLK3Q9C098 648 aa15.9■□□□□ 0.14
PTBP1-201ENST00000349038 TUT1Q9H6E5 874 aaKnown RBP15.9■□□□□ 0.14
PTBP1-201ENST00000349038 VCLP18206 1134 aa15.9■□□□□ 0.14
PTBP1-201ENST00000349038 NCF2P19878 526 aaPredicted RBP15.9■□□□□ 0.14
PTBP1-201ENST00000349038 PMLP29590 882 aa15.9■□□□□ 0.14
PTBP1-201ENST00000349038 PDK1Q15118 436 aa15.9■□□□□ 0.14
PTBP1-201ENST00000349038 MOXD1Q6UVY6 613 aa15.9■□□□□ 0.14
PTBP1-201ENST00000349038 DENND5BQ6ZUT9 1274 aa15.9■□□□□ 0.14
PTBP1-201ENST00000349038 TRIM50Q86XT4 487 aa15.9■□□□□ 0.14
PTBP1-201ENST00000349038 HOMER2Q9NSB8 354 aa15.9■□□□□ 0.14
PTBP1-201ENST00000349038 FRMPD4Q14CM0 1322 aa15.9■□□□□ 0.14
PTBP1-201ENST00000349038 CFLARO15519 480 aa15.89■□□□□ 0.13
PTBP1-201ENST00000349038 C6orf222P0C671 652 aaPredicted RBP15.89■□□□□ 0.13
PTBP1-201ENST00000349038 TCN1P20061 433 aaPredicted RBP15.89■□□□□ 0.13
PTBP1-201ENST00000349038 RPA1P27694 616 aa15.89■□□□□ 0.13
PTBP1-201ENST00000349038 MAPK10P53779 464 aa15.89■□□□□ 0.13
PTBP1-201ENST00000349038 HPCAP84074 193 aa15.89■□□□□ 0.13
PTBP1-201ENST00000349038 PPP3CAQ08209 521 aa15.89■□□□□ 0.13
PTBP1-201ENST00000349038 KBTBD12Q3ZCT8 623 aa15.89■□□□□ 0.13
PTBP1-201ENST00000349038 GRAMD4Q6IC98 578 aa15.89■□□□□ 0.13
PTBP1-201ENST00000349038 TSHZ1Q6ZSZ6 1077 aa15.89■□□□□ 0.13
PTBP1-201ENST00000349038 ARMCX6Q7L4S7 300 aa15.89■□□□□ 0.13
PTBP1-201ENST00000349038 LRRN4Q8WUT4 740 aa15.89■□□□□ 0.13
PTBP1-201ENST00000349038 C7orf43Q8WVR3 580 aa15.89■□□□□ 0.13
PTBP1-201ENST00000349038 CRYGNQ8WXF5 182 aa15.89■□□□□ 0.13
PTBP1-201ENST00000349038 ANO3Q9BYT9 981 aa15.89■□□□□ 0.13
PTBP1-201ENST00000349038 BTBD7Q9P203 1132 aa15.89■□□□□ 0.13
PTBP1-201ENST00000349038 HSFX1Q9UBD0 423 aa15.89■□□□□ 0.13
PTBP1-201ENST00000349038 F5H423 210 aaPredicted RBP15.89■□□□□ 0.13
PTBP1-201ENST00000349038 ATP2A1O14983 1001 aa15.89■□□□□ 0.13
PTBP1-201ENST00000349038 TOM1L1O75674 476 aa15.89■□□□□ 0.13
PTBP1-201ENST00000349038 MAP3K6O95382 1288 aa15.89■□□□□ 0.13
PTBP1-201ENST00000349038 IVDP26440 423 aa15.89■□□□□ 0.13
PTBP1-201ENST00000349038 CA8P35219 290 aa15.89■□□□□ 0.13
PTBP1-201ENST00000349038 BASP1P80723 227 aaKnown RBP15.89■□□□□ 0.13
PTBP1-201ENST00000349038 CDK16Q00536 496 aa15.89■□□□□ 0.13
PTBP1-201ENST00000349038 GRAPQ13588 217 aa15.89■□□□□ 0.13
PTBP1-201ENST00000349038 ERMNQ8TAM6 284 aa15.89■□□□□ 0.13
PTBP1-201ENST00000349038 GRAPLQ8TC17 118 aaPredicted RBP15.89■□□□□ 0.13
PTBP1-201ENST00000349038 IFT122Q9HBG6 1241 aa15.89■□□□□ 0.13
PTBP1-201ENST00000349038 CD209Q9NNX6 404 aa15.89■□□□□ 0.13
PTBP1-201ENST00000349038 ECE2O60344 883 aa15.89■□□□□ 0.13
PTBP1-201ENST00000349038 TBC1D12O60347 775 aa15.89■□□□□ 0.13
PTBP1-201ENST00000349038 TOP3BO95985 862 aaKnown RBP15.89■□□□□ 0.13
PTBP1-201ENST00000349038 ALAS1P13196 640 aa15.89■□□□□ 0.13
PTBP1-201ENST00000349038 HADHBP55084 474 aaKnown RBP15.89■□□□□ 0.13
PTBP1-201ENST00000349038 PPIDQ08752 370 aaKnown RBP15.89■□□□□ 0.13
PTBP1-201ENST00000349038 CYLC2Q14093 348 aaPredicted RBP15.89■□□□□ 0.13
PTBP1-201ENST00000349038 NADK2Q4G0N4 442 aa15.89■□□□□ 0.13
PTBP1-201ENST00000349038 C1orf228Q6PIY5 440 aa15.89■□□□□ 0.13
PTBP1-201ENST00000349038 GRK7Q8WTQ7 553 aa15.89■□□□□ 0.13
PTBP1-201ENST00000349038 PAFAH2Q99487 392 aa15.89■□□□□ 0.13
PTBP1-201ENST00000349038 MMP19Q99542 508 aa15.89■□□□□ 0.13
PTBP1-201ENST00000349038 RANBP17Q9H2T7 1088 aaKnown RBP15.89■□□□□ 0.13
PTBP1-201ENST00000349038 ARMC7Q9H6L4 198 aa15.89■□□□□ 0.13
PTBP1-201ENST00000349038 TOPORSQ9NS56 1045 aaPredicted RBP15.89■□□□□ 0.13
PTBP1-201ENST00000349038 C15orf38-AP3S2A0A0A6YYH1 394 aa15.88■□□□□ 0.13
PTBP1-201ENST00000349038 RBM47A0AV96 593 aaKnown RBP15.88■□□□□ 0.13
PTBP1-201ENST00000349038 K7ENM7 598 aa15.88■□□□□ 0.13
PTBP1-201ENST00000349038 PROCP04070 461 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms