RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 ZNF865P0CJ78 1059 aaPredicted RBP21.5■■□□□ 1.03
CHRNA3-202ENST00000348639 RARGP13631 454 aa21.5■■□□□ 1.03
CHRNA3-202ENST00000348639 IFFO1Q0D2I5 559 aa21.5■■□□□ 1.03
CHRNA3-202ENST00000348639 CNGA2Q16280 664 aa21.5■■□□□ 1.03
CHRNA3-202ENST00000348639 DENND2CQ68D51 928 aa21.5■■□□□ 1.03
CHRNA3-202ENST00000348639 SLC27A1Q6PCB7 646 aa21.5■■□□□ 1.03
CHRNA3-202ENST00000348639 FNIP1Q8TF40 1166 aa21.5■■□□□ 1.03
CHRNA3-202ENST00000348639 SNF8Q96H20 258 aa21.5■■□□□ 1.03
CHRNA3-202ENST00000348639 CPXM1Q96SM3 734 aa21.5■■□□□ 1.03
CHRNA3-202ENST00000348639 DDX56Q9NY93 547 aaKnown RBP21.5■■□□□ 1.03
CHRNA3-202ENST00000348639 TP73O15350 636 aa21.5■■□□□ 1.03
CHRNA3-202ENST00000348639 IVDP26440 423 aa21.5■■□□□ 1.03
CHRNA3-202ENST00000348639 PTPN7P35236 360 aa21.5■■□□□ 1.03
CHRNA3-202ENST00000348639 RFC1P35251 1148 aaPredicted RBP21.5■■□□□ 1.03
CHRNA3-202ENST00000348639 PSMC1P62191 440 aaKnown RBP21.5■■□□□ 1.03
CHRNA3-202ENST00000348639 GNGT1P63211 74 aa21.5■■□□□ 1.03
CHRNA3-202ENST00000348639 ZNF268Q14587 947 aaPredicted RBP21.5■■□□□ 1.03
CHRNA3-202ENST00000348639 CHADLQ6NUI6 762 aa21.5■■□□□ 1.03
CHRNA3-202ENST00000348639 CATSPER4Q7RTX7 472 aa21.5■■□□□ 1.03
CHRNA3-202ENST00000348639 XYLT1Q86Y38 959 aa21.5■■□□□ 1.03
CHRNA3-202ENST00000348639 CCDC114Q96M63 670 aa21.5■■□□□ 1.03
CHRNA3-202ENST00000348639 HEXIM2Q96MH2 286 aaKnown RBP21.5■■□□□ 1.03
CHRNA3-202ENST00000348639 CDHR5Q9HBB8 845 aa21.5■■□□□ 1.03
CHRNA3-202ENST00000348639 KLHL11Q9NVR0 708 aa21.5■■□□□ 1.03
CHRNA3-202ENST00000348639 TJP2Q9UDY2 1190 aa21.5■■□□□ 1.03
CHRNA3-202ENST00000348639 NEU2Q9Y3R4 380 aa21.5■■□□□ 1.03
CHRNA3-202ENST00000348639 GRIN2DO15399 1336 aa21.49■■□□□ 1.03
CHRNA3-202ENST00000348639 DCAF8L1A6NGE4 600 aa21.49■■□□□ 1.03
CHRNA3-202ENST00000348639 PI4K2BG5E9Z4 385 aa21.49■■□□□ 1.03
CHRNA3-202ENST00000348639 GOLGA8SH3BPF8 625 aa21.49■■□□□ 1.03
CHRNA3-202ENST00000348639 GABRB2P47870 512 aa21.49■■□□□ 1.03
CHRNA3-202ENST00000348639 ATP1A2P50993 1020 aa21.49■■□□□ 1.03
CHRNA3-202ENST00000348639 MFSD10Q14728 455 aa21.49■■□□□ 1.03
CHRNA3-202ENST00000348639 KRT71Q3SY84 523 aa21.49■■□□□ 1.03
CHRNA3-202ENST00000348639 ZFYVE27Q5T4F4 411 aa21.49■■□□□ 1.03
CHRNA3-202ENST00000348639 POLNQ7Z5Q5 900 aa21.49■■□□□ 1.03
CHRNA3-202ENST00000348639 SAPCD2Q86UD0 394 aa21.49■■□□□ 1.03
CHRNA3-202ENST00000348639 OSMRQ99650 979 aa21.49■■□□□ 1.03
CHRNA3-202ENST00000348639 SEMA4AQ9H3S1 761 aa21.49■■□□□ 1.03
CHRNA3-202ENST00000348639 SYNCQ9H7C4 482 aa21.49■■□□□ 1.03
CHRNA3-202ENST00000348639 KIAA1257Q9ULG3 409 aa21.49■■□□□ 1.03
CHRNA3-202ENST00000348639 CITO14578 2027 aa21.49■■□□□ 1.03
CHRNA3-202ENST00000348639 EIF3HO15372 352 aaKnown RBP eCLIP21.48■■□□□ 1.03
CHRNA3-202ENST00000348639 TJP3O95049 919 aa21.48■■□□□ 1.03
CHRNA3-202ENST00000348639 ERBB2P04626 1255 aa21.48■■□□□ 1.03
CHRNA3-202ENST00000348639 CYP2C9P11712 490 aa21.48■■□□□ 1.03
CHRNA3-202ENST00000348639 PSMA2P25787 234 aa21.48■■□□□ 1.03
CHRNA3-202ENST00000348639 GPD2P43304 727 aa21.48■■□□□ 1.03
CHRNA3-202ENST00000348639 BEX3Q00994 111 aa21.48■■□□□ 1.03
CHRNA3-202ENST00000348639 MYO1EQ12965 1108 aa21.48■■□□□ 1.03
CHRNA3-202ENST00000348639 RGMBQ6NW40 437 aa21.48■■□□□ 1.03
CHRNA3-202ENST00000348639 RHBDF2Q6PJF5 856 aa21.48■■□□□ 1.03
CHRNA3-202ENST00000348639 C17orf99Q6UX52 265 aa21.48■■□□□ 1.03
CHRNA3-202ENST00000348639 MFSD7Q6UXD7 560 aa21.48■■□□□ 1.03
CHRNA3-202ENST00000348639 SPOCD1Q6ZMY3 1216 aa21.48■■□□□ 1.03
CHRNA3-202ENST00000348639 IFNL1Q8IU54 200 aa21.48■■□□□ 1.03
CHRNA3-202ENST00000348639 M0QYV0 167 aa21.48■■□□□ 1.03
CHRNA3-202ENST00000348639 MYL3P08590 195 aa21.48■■□□□ 1.03
CHRNA3-202ENST00000348639 DARSP14868 501 aaKnown RBP21.48■■□□□ 1.03
CHRNA3-202ENST00000348639 NDST1P52848 882 aa21.48■■□□□ 1.03
CHRNA3-202ENST00000348639 CAV1Q03135 178 aa21.48■■□□□ 1.03
CHRNA3-202ENST00000348639 TXNRD3NBQ6F5E7 133 aa21.48■■□□□ 1.03
CHRNA3-202ENST00000348639 NOTUMQ6P988 496 aa21.48■■□□□ 1.03
CHRNA3-202ENST00000348639 HOOK3Q86VS8 718 aa21.48■■□□□ 1.03
CHRNA3-202ENST00000348639 ARFGAP2Q8N6H7 521 aa21.48■■□□□ 1.03
CHRNA3-202ENST00000348639 JOSD2Q8TAC2 188 aa21.48■■□□□ 1.03
CHRNA3-202ENST00000348639 SNX27Q96L92 541 aa21.48■■□□□ 1.03
CHRNA3-202ENST00000348639 SNTG2Q9NY99 539 aa21.48■■□□□ 1.03
CHRNA3-202ENST00000348639 CWC15Q9P013 229 aaKnown RBP21.48■■□□□ 1.03
CHRNA3-202ENST00000348639 SHBGP04278 402 aa21.47■■□□□ 1.03
CHRNA3-202ENST00000348639 KRT10P13645 584 aa21.47■■□□□ 1.03
CHRNA3-202ENST00000348639 ATF2P15336 505 aa21.47■■□□□ 1.03
CHRNA3-202ENST00000348639 ADAM17P78536 824 aa21.47■■□□□ 1.03
CHRNA3-202ENST00000348639 LMNB2Q03252 620 aa21.47■■□□□ 1.03
CHRNA3-202ENST00000348639 ADCY2Q08462 1091 aa21.47■■□□□ 1.03
CHRNA3-202ENST00000348639 PDCLQ13371 301 aa21.47■■□□□ 1.03
CHRNA3-202ENST00000348639 SLC29A2Q14542 456 aa21.47■■□□□ 1.03
CHRNA3-202ENST00000348639 ODF2Q5BJF6 829 aa21.47■■□□□ 1.03
CHRNA3-202ENST00000348639 DRICH1Q6PGQ1 229 aaPredicted RBP21.47■■□□□ 1.03
CHRNA3-202ENST00000348639 USP6NLQ92738 828 aa21.47■■□□□ 1.03
CHRNA3-202ENST00000348639 EIF2AQ9BY44 585 aaKnown RBP21.47■■□□□ 1.03
CHRNA3-202ENST00000348639 TSPYL1Q9H0U9 437 aa21.47■■□□□ 1.03
CHRNA3-202ENST00000348639 ATF7P17544 494 aaPredicted RBP21.46■■□□□ 1.03
CHRNA3-202ENST00000348639 RGS2P41220 211 aa21.46■■□□□ 1.03
CHRNA3-202ENST00000348639 CPT1AP50416 773 aa21.46■■□□□ 1.03
CHRNA3-202ENST00000348639 YARSP54577 528 aaKnown RBP21.46■■□□□ 1.03
CHRNA3-202ENST00000348639 HIC1Q14526 733 aa21.46■■□□□ 1.03
CHRNA3-202ENST00000348639 ZBTB6Q15916 424 aa21.46■■□□□ 1.03
CHRNA3-202ENST00000348639 TFDP3Q5H9I0 405 aa21.46■■□□□ 1.03
CHRNA3-202ENST00000348639 KAZNQ674X7 775 aa21.46■■□□□ 1.03
CHRNA3-202ENST00000348639 ZNF365Q70YC5 407 aa21.46■■□□□ 1.03
CHRNA3-202ENST00000348639 CCDC89Q8N998 374 aa21.46■■□□□ 1.03
CHRNA3-202ENST00000348639 DNAJB3Q8WWF6 145 aa21.46■■□□□ 1.03
CHRNA3-202ENST00000348639 RAPGEF5Q92565 580 aa21.46■■□□□ 1.03
CHRNA3-202ENST00000348639 MCRS1Q96EZ8 462 aa21.46■■□□□ 1.03
CHRNA3-202ENST00000348639 TRAIPQ9BWF2 469 aa21.46■■□□□ 1.03
CHRNA3-202ENST00000348639 NT5C1AQ9BXI3 368 aa21.46■■□□□ 1.03
CHRNA3-202ENST00000348639 AP5M1Q9H0R1 490 aa21.46■■□□□ 1.03
CHRNA3-202ENST00000348639 BCCIPQ9P287 314 aaKnown RBP eCLIP21.46■■□□□ 1.03
CHRNA3-202ENST00000348639 TRPM7Q96QT4 1865 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms