RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 PLCB3Q01970 1234 aa28.76■■■□□ 2.19
SSBP4-202ENST00000348495 USP41Q3LFD5 358 aa28.76■■■□□ 2.19
SSBP4-202ENST00000348495 TOGARAM2Q6ZUX3 1019 aa28.76■■■□□ 2.19
SSBP4-202ENST00000348495 WDR3Q9UNX4 943 aaKnown RBP eCLIP28.76■■■□□ 2.19
SSBP4-202ENST00000348495 MED7O43513 233 aa28.75■■■□□ 2.19
SSBP4-202ENST00000348495 TBC1D4O60343 1298 aa28.75■■■□□ 2.19
SSBP4-202ENST00000348495 FGF18O76093 207 aa28.75■■■□□ 2.19
SSBP4-202ENST00000348495 INTS6LQ5JSJ4 861 aaKnown RBP28.75■■■□□ 2.19
SSBP4-202ENST00000348495 FAM171BQ6P995 826 aa28.75■■■□□ 2.19
SSBP4-202ENST00000348495 HERC2P3Q9BVR0 1158 aa28.75■■■□□ 2.19
SSBP4-202ENST00000348495 FAM49BQ9NUQ9 324 aa28.75■■■□□ 2.19
SSBP4-202ENST00000348495 NAGPAQ9UK23 515 aa28.75■■■□□ 2.19
SSBP4-202ENST00000348495 RWDD3Q9Y3V2 267 aa28.75■■■□□ 2.19
SSBP4-202ENST00000348495 NLRC5Q86WI3 1866 aa28.75■■■□□ 2.19
SSBP4-202ENST00000348495 STILQ15468 1287 aa28.74■■■□□ 2.19
SSBP4-202ENST00000348495 CCDC142Q17RM4 750 aa28.74■■■□□ 2.19
SSBP4-202ENST00000348495 PPP1R26Q5T8A7 1209 aaPredicted RBP28.74■■■□□ 2.19
SSBP4-202ENST00000348495 LCLAT1Q6UWP7 414 aa28.74■■■□□ 2.19
SSBP4-202ENST00000348495 PLVAPQ9BX97 442 aa28.74■■■□□ 2.19
SSBP4-202ENST00000348495 REXO2Q9Y3B8 237 aaKnown RBP28.74■■■□□ 2.19
SSBP4-202ENST00000348495 RANBP2P49792 3224 aaKnown RBP28.74■■■□□ 2.19
SSBP4-202ENST00000348495 MYBPHLA2RUH7 354 aa28.74■■■□□ 2.19
SSBP4-202ENST00000348495 CYP1A1P04798 512 aaPredicted RBP28.74■■■□□ 2.19
SSBP4-202ENST00000348495 ZNF280DQ6N043 979 aa28.74■■■□□ 2.19
SSBP4-202ENST00000348495 TRIM72Q6ZMU5 477 aa28.74■■■□□ 2.19
SSBP4-202ENST00000348495 ANKS3Q6ZW76 656 aa28.74■■■□□ 2.19
SSBP4-202ENST00000348495 KLHL23Q8NBE8 558 aa28.74■■■□□ 2.19
SSBP4-202ENST00000348495 MYCBPAPQ8TBZ2 947 aa28.74■■■□□ 2.19
SSBP4-202ENST00000348495 PIK3R5Q8WYR1 880 aa28.74■■■□□ 2.19
SSBP4-202ENST00000348495 CYFIP2Q96F07 1278 aa28.74■■■□□ 2.19
SSBP4-202ENST00000348495 STK39Q9UEW8 545 aa28.74■■■□□ 2.19
SSBP4-202ENST00000348495 YBX2Q9Y2T7 364 aaKnown RBP28.74■■■□□ 2.19
SSBP4-202ENST00000348495 LAMA2P24043 3122 aaKnown RBP28.74■■■□□ 2.19
SSBP4-202ENST00000348495 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.73■■■□□ 2.19
SSBP4-202ENST00000348495 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.73■■■□□ 2.19
SSBP4-202ENST00000348495 CA3P07451 260 aa28.73■■■□□ 2.19
SSBP4-202ENST00000348495 DSG1Q02413 1049 aa28.73■■■□□ 2.19
SSBP4-202ENST00000348495 CTXN3Q4LDR2 81 aa28.73■■■□□ 2.19
SSBP4-202ENST00000348495 LRRTM3Q86VH5 581 aa28.73■■■□□ 2.19
SSBP4-202ENST00000348495 TMEM209Q96SK2 561 aa28.73■■■□□ 2.19
SSBP4-202ENST00000348495 DESI2Q9BSY9 194 aa28.73■■■□□ 2.19
SSBP4-202ENST00000348495 ZCWPW1Q9H0M4 648 aa28.73■■■□□ 2.19
SSBP4-202ENST00000348495 LHX5Q9H2C1 402 aa28.73■■■□□ 2.19
SSBP4-202ENST00000348495 EIF2AK3Q9NZJ5 1116 aaKnown RBP28.73■■■□□ 2.19
SSBP4-202ENST00000348495 TSPAN16Q9UKR8 245 aa28.73■■■□□ 2.19
SSBP4-202ENST00000348495 ADGRG1Q9Y653 693 aa28.73■■■□□ 2.19
SSBP4-202ENST00000348495 PDE4DIPQ5VU43 2346 aa28.73■■■□□ 2.19
SSBP4-202ENST00000348495 C5orf67F2Z3F1 127 aa28.72■■■□□ 2.19
SSBP4-202ENST00000348495 GZMAP12544 262 aa28.72■■■□□ 2.19
SSBP4-202ENST00000348495 UNGP13051 313 aaPredicted RBP28.72■■■□□ 2.19
SSBP4-202ENST00000348495 CCDC130P13994 396 aa28.72■■■□□ 2.19
SSBP4-202ENST00000348495 SSTR3P32745 418 aaPredicted RBP28.72■■■□□ 2.19
SSBP4-202ENST00000348495 CDH5P33151 784 aaPredicted RBP28.72■■■□□ 2.19
SSBP4-202ENST00000348495 CTNNB1P35222 781 aa28.72■■■□□ 2.19
SSBP4-202ENST00000348495 CYP27A1Q02318 531 aa28.72■■■□□ 2.19
SSBP4-202ENST00000348495 KRT17Q04695 432 aa28.72■■■□□ 2.19
SSBP4-202ENST00000348495 MDH1BQ5I0G3 518 aa28.72■■■□□ 2.19
SSBP4-202ENST00000348495 FUKQ8N0W3 1084 aa28.72■■■□□ 2.19
SSBP4-202ENST00000348495 HNRNPABQ99729 332 aaKnown RBP28.72■■■□□ 2.19
SSBP4-202ENST00000348495 C17orf80Q9BSJ5 609 aa28.72■■■□□ 2.19
SSBP4-202ENST00000348495 OXCT2Q9BYC2 517 aaPredicted RBP28.72■■■□□ 2.19
SSBP4-202ENST00000348495 SEPT11Q9NVA2 429 aaKnown RBP28.72■■■□□ 2.19
SSBP4-202ENST00000348495 GTF3C4Q9UKN8 822 aa28.72■■■□□ 2.19
SSBP4-202ENST00000348495 ZKSCAN5Q9Y2L8 839 aa28.72■■■□□ 2.19
SSBP4-202ENST00000348495 OR6C75A6NL08 312 aa28.72■■■□□ 2.19
SSBP4-202ENST00000348495 H7C4K7 107 aa28.72■■■□□ 2.19
SSBP4-202ENST00000348495 MICAL2O94851 1124 aa28.72■■■□□ 2.19
SSBP4-202ENST00000348495 LSM8O95777 96 aaKnown RBP28.72■■■□□ 2.19
SSBP4-202ENST00000348495 PBX2P40425 430 aa28.72■■■□□ 2.19
SSBP4-202ENST00000348495 CLEC16AQ2KHT3 1053 aa28.72■■■□□ 2.19
SSBP4-202ENST00000348495 PKDCCQ504Y2 493 aa28.72■■■□□ 2.19
SSBP4-202ENST00000348495 DENND1BQ6P3S1 775 aa28.72■■■□□ 2.19
SSBP4-202ENST00000348495 ALKBH5Q6P6C2 394 aaKnown RBP28.72■■■□□ 2.19
SSBP4-202ENST00000348495 PAQR9Q6ZVX9 377 aa28.72■■■□□ 2.19
SSBP4-202ENST00000348495 TDHQ8IZJ6 230 aa28.72■■■□□ 2.19
SSBP4-202ENST00000348495 ACRBPQ8NEB7 543 aa28.72■■■□□ 2.19
SSBP4-202ENST00000348495 PCED1BQ96HM7 432 aa28.72■■■□□ 2.19
SSBP4-202ENST00000348495 PRO3102Q9H379 93 aa28.72■■■□□ 2.19
SSBP4-202ENST00000348495 TAS2R14Q9NYV8 317 aa28.72■■■□□ 2.19
SSBP4-202ENST00000348495 MTRRQ9UBK8 725 aa28.72■■■□□ 2.19
SSBP4-202ENST00000348495 BACE2Q9Y5Z0 518 aa28.72■■■□□ 2.19
SSBP4-202ENST00000348495 NOMO3P69849 1222 aa28.71■■■□□ 2.19
SSBP4-202ENST00000348495 TSPY1Q01534 308 aa28.71■■■□□ 2.19
SSBP4-202ENST00000348495 PRSS55Q6UWB4 352 aaPredicted RBP28.71■■■□□ 2.19
SSBP4-202ENST00000348495 RSPO2Q6UXX9 243 aaPredicted RBP28.71■■■□□ 2.19
SSBP4-202ENST00000348495 SPRED2Q7Z698 418 aa28.71■■■□□ 2.19
SSBP4-202ENST00000348495 PASD1Q8IV76 773 aa28.71■■■□□ 2.19
SSBP4-202ENST00000348495 GPR65Q8IYL9 337 aa28.71■■■□□ 2.19
SSBP4-202ENST00000348495 VPS52Q8N1B4 723 aa28.71■■■□□ 2.19
SSBP4-202ENST00000348495 SLC2A14Q8TDB8 520 aa28.71■■■□□ 2.19
SSBP4-202ENST00000348495 RIN2Q8WYP3 895 aaPredicted RBP28.71■■■□□ 2.19
SSBP4-202ENST00000348495 B3GNT5Q9BYG0 378 aa28.71■■■□□ 2.19
SSBP4-202ENST00000348495 PBX4Q9BYU1 374 aa28.71■■■□□ 2.19
SSBP4-202ENST00000348495 PDCL3Q9H2J4 239 aa28.71■■■□□ 2.19
SSBP4-202ENST00000348495 TMLHEQ9NVH6 421 aa28.71■■■□□ 2.19
SSBP4-202ENST00000348495 GLUD2P49448 558 aa28.7■■■□□ 2.19
SSBP4-202ENST00000348495 SPA17Q15506 151 aa28.7■■■□□ 2.19
SSBP4-202ENST00000348495 GOLGA7BQ2TAP0 167 aa28.7■■■□□ 2.19
SSBP4-202ENST00000348495 WDTC1Q8N5D0 677 aa28.7■■■□□ 2.19
SSBP4-202ENST00000348495 LZTS1Q9Y250 596 aa28.7■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms