RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 GPAT2Q6NUI2 795 aa15.44■□□□□ 0.06
NUP50-201ENST00000347635 NOP9Q86U38 636 aaKnown RBP15.44■□□□□ 0.06
NUP50-201ENST00000347635 SLC5A5Q92911 643 aa15.44■□□□□ 0.06
NUP50-201ENST00000347635 FIS1Q9Y3D6 152 aa15.44■□□□□ 0.06
NUP50-201ENST00000347635 KBTBD13C9JR72 458 aa15.43■□□□□ 0.06
NUP50-201ENST00000347635 DYNC1LI2O43237 492 aaPredicted RBP15.43■□□□□ 0.06
NUP50-201ENST00000347635 WEE2P0C1S8 567 aa15.43■□□□□ 0.06
NUP50-201ENST00000347635 ALDH5A1P51649 535 aaPredicted RBP15.43■□□□□ 0.06
NUP50-201ENST00000347635 AUHQ13825 339 aaKnown RBP15.43■□□□□ 0.06
NUP50-201ENST00000347635 L3MBTL1Q9Y468 752 aa15.43■□□□□ 0.06
NUP50-201ENST00000347635 KRT10P13645 584 aa15.43■□□□□ 0.06
NUP50-201ENST00000347635 NPTX2P47972 431 aa15.43■□□□□ 0.06
NUP50-201ENST00000347635 ERFP50548 548 aa15.43■□□□□ 0.06
NUP50-201ENST00000347635 MTM1Q13496 603 aa15.43■□□□□ 0.06
NUP50-201ENST00000347635 PTK6Q13882 451 aa15.43■□□□□ 0.06
NUP50-201ENST00000347635 OR6B3Q8NGW1 331 aa15.43■□□□□ 0.06
NUP50-201ENST00000347635 ZC3H15Q8WU90 426 aaKnown RBP15.43■□□□□ 0.06
NUP50-201ENST00000347635 FGFBP2Q9BYJ0 223 aa15.43■□□□□ 0.06
NUP50-201ENST00000347635 FBXO28Q9NVF7 368 aa15.43■□□□□ 0.06
NUP50-201ENST00000347635 HEY2Q9UBP5 337 aa15.43■□□□□ 0.06
NUP50-201ENST00000347635 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.43■□□□□ 0.06
NUP50-201ENST00000347635 SNX3O60493 162 aa15.43■□□□□ 0.06
NUP50-201ENST00000347635 HUS1O60921 280 aa15.43■□□□□ 0.06
NUP50-201ENST00000347635 PRKCBP05771 671 aa15.43■□□□□ 0.06
NUP50-201ENST00000347635 STX3Q13277 289 aa15.43■□□□□ 0.06
NUP50-201ENST00000347635 NBPF20Q3BBV1 942 aa15.43■□□□□ 0.06
NUP50-201ENST00000347635 PCNX4Q63HM2 1172 aa15.43■□□□□ 0.06
NUP50-201ENST00000347635 KRT80Q6KB66 452 aa15.43■□□□□ 0.06
NUP50-201ENST00000347635 SLC30A10Q6XR72 485 aa15.43■□□□□ 0.06
NUP50-201ENST00000347635 ACAD11Q709F0 780 aa15.43■□□□□ 0.06
NUP50-201ENST00000347635 MCOLN2Q8IZK6 566 aa15.43■□□□□ 0.06
NUP50-201ENST00000347635 SIX6OS1Q8N1H7 587 aa15.43■□□□□ 0.06
NUP50-201ENST00000347635 NAF1Q96HR8 494 aaKnown RBP15.43■□□□□ 0.06
NUP50-201ENST00000347635 MARCOQ9UEW3 520 aaPredicted RBP15.43■□□□□ 0.06
NUP50-201ENST00000347635 PPME1Q9Y570 386 aa15.43■□□□□ 0.06
NUP50-201ENST00000347635 TYW5A2RUC4 315 aaKnown RBP15.43■□□□□ 0.06
NUP50-201ENST00000347635 H3BRJ5 948 aa15.43■□□□□ 0.06
NUP50-201ENST00000347635 RARBP10826 455 aa15.43■□□□□ 0.06
NUP50-201ENST00000347635 CYP24A1Q07973 514 aa15.43■□□□□ 0.06
NUP50-201ENST00000347635 SPATA18Q8TC71 538 aa15.43■□□□□ 0.06
NUP50-201ENST00000347635 ANKRD27Q96NW4 1050 aa15.43■□□□□ 0.06
NUP50-201ENST00000347635 DLGAP2Q9P1A6 1054 aa15.43■□□□□ 0.06
NUP50-201ENST00000347635 SLC24A2Q9UI40 661 aa15.43■□□□□ 0.06
NUP50-201ENST00000347635 F5H423 210 aaPredicted RBP15.42■□□□□ 0.06
NUP50-201ENST00000347635 CREB3O43889 395 aa15.42■□□□□ 0.06
NUP50-201ENST00000347635 SNRPAP09012 282 aaKnown RBP15.42■□□□□ 0.06
NUP50-201ENST00000347635 RCN1Q15293 331 aa15.42■□□□□ 0.06
NUP50-201ENST00000347635 C1orf186Q6ZWK4 172 aa15.42■□□□□ 0.06
NUP50-201ENST00000347635 APLFQ8IW19 511 aaPredicted RBP15.42■□□□□ 0.06
NUP50-201ENST00000347635 FAM71DQ8N9W8 422 aa15.42■□□□□ 0.06
NUP50-201ENST00000347635 ZNF560Q96MR9 790 aa15.42■□□□□ 0.06
NUP50-201ENST00000347635 NKRFO15226 690 aaKnown RBP eCLIP15.42■□□□□ 0.06
NUP50-201ENST00000347635 ZBTB24O43167 697 aaPredicted RBP15.42■□□□□ 0.06
NUP50-201ENST00000347635 APRTP07741 180 aa15.42■□□□□ 0.06
NUP50-201ENST00000347635 BRD2P25440 801 aaKnown RBP15.42■□□□□ 0.06
NUP50-201ENST00000347635 ITKQ08881 620 aa15.42■□□□□ 0.06
NUP50-201ENST00000347635 THOC5Q13769 683 aaKnown RBP15.42■□□□□ 0.06
NUP50-201ENST00000347635 BMT2Q1RMZ1 405 aa15.42■□□□□ 0.06
NUP50-201ENST00000347635 ANO5Q75V66 913 aa15.42■□□□□ 0.06
NUP50-201ENST00000347635 RNF149Q8NC42 400 aa15.42■□□□□ 0.06
NUP50-201ENST00000347635 ART4Q93070 314 aa15.42■□□□□ 0.06
NUP50-201ENST00000347635 PCMTD2Q9NV79 361 aa15.42■□□□□ 0.06
NUP50-201ENST00000347635 STRNO43815 780 aa15.42■□□□□ 0.06
NUP50-201ENST00000347635 CYP3A4P08684 503 aa15.42■□□□□ 0.06
NUP50-201ENST00000347635 CUL3Q13618 768 aa15.42■□□□□ 0.06
NUP50-201ENST00000347635 TFDP3Q5H9I0 405 aa15.42■□□□□ 0.06
NUP50-201ENST00000347635 FBXO36Q8NEA4 188 aa15.42■□□□□ 0.06
NUP50-201ENST00000347635 OPTNQ96CV9 577 aa15.42■□□□□ 0.06
NUP50-201ENST00000347635 CAMKK2Q96RR4 588 aa15.42■□□□□ 0.06
NUP50-201ENST00000347635 THTPAQ9BU02 230 aa15.42■□□□□ 0.06
NUP50-201ENST00000347635 IPO11Q9UI26 975 aaKnown RBP15.42■□□□□ 0.06
NUP50-201ENST00000347635 OPLAHO14841 1288 aa15.42■□□□□ 0.06
NUP50-201ENST00000347635 ZBTB39O15060 712 aa15.42■□□□□ 0.06
NUP50-201ENST00000347635 ADAMTS3O15072 1205 aa15.42■□□□□ 0.06
NUP50-201ENST00000347635 ACADSP16219 412 aa15.42■□□□□ 0.06
NUP50-201ENST00000347635 ZFXP17010 805 aaPredicted RBP15.42■□□□□ 0.06
NUP50-201ENST00000347635 SLC26A2P50443 739 aa15.42■□□□□ 0.06
NUP50-201ENST00000347635 ESRRGP62508 458 aa15.42■□□□□ 0.06
NUP50-201ENST00000347635 RRP1BQ14684 758 aaKnown RBP15.42■□□□□ 0.06
NUP50-201ENST00000347635 CYP4A22Q5TCH4 519 aa15.42■□□□□ 0.06
NUP50-201ENST00000347635 NIPA1Q7RTP0 329 aa15.42■□□□□ 0.06
NUP50-201ENST00000347635 MTDHQ86UE4 582 aaKnown RBP15.42■□□□□ 0.06
NUP50-201ENST00000347635 BBS5Q8N3I7 341 aa15.42■□□□□ 0.06
NUP50-201ENST00000347635 FRMD8P1Q9BZ68 369 aaPredicted RBP15.42■□□□□ 0.06
NUP50-201ENST00000347635 RSAD1Q9HA92 442 aa15.42■□□□□ 0.06
NUP50-201ENST00000347635 PAK5Q9P286 719 aa15.42■□□□□ 0.06
NUP50-201ENST00000347635 CYP2B6P20813 491 aa15.41■□□□□ 0.06
NUP50-201ENST00000347635 PTPN4P29074 926 aa15.41■□□□□ 0.06
NUP50-201ENST00000347635 SERPINB9P50453 376 aa15.41■□□□□ 0.06
NUP50-201ENST00000347635 WDR72Q3MJ13 1102 aa15.41■□□□□ 0.06
NUP50-201ENST00000347635 PRELID2Q8N945 189 aa15.41■□□□□ 0.06
NUP50-201ENST00000347635 CCDC124Q96CT7 223 aaKnown RBP15.41■□□□□ 0.06
NUP50-201ENST00000347635 FAM111AQ96PZ2 611 aa15.41■□□□□ 0.06
NUP50-201ENST00000347635 DCLRE1BQ9H816 532 aa15.41■□□□□ 0.06
NUP50-201ENST00000347635 KLHL8Q9P2G9 620 aaPredicted RBP15.41■□□□□ 0.06
NUP50-201ENST00000347635 CTNNAL1Q9UBT7 734 aa15.41■□□□□ 0.06
NUP50-201ENST00000347635 E2F7Q96AV8 911 aa15.41■□□□□ 0.06
NUP50-201ENST00000347635 HDAC11Q96DB2 347 aa15.41■□□□□ 0.06
NUP50-201ENST00000347635 MTBPQ96DY7 904 aa15.41■□□□□ 0.06
NUP50-201ENST00000347635 PAFAH2Q99487 392 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms