RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 PNO1Q9NRX1 252 aaKnown RBP3.91□□□□□ -1.78
SYNE2-202ENST00000344113 CYP39A1Q9NYL5 469 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 AP3M1Q9Y2T2 418 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 FAM187AA6NFU0 413 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 TFECO14948 347 aaPredicted RBP3.91□□□□□ -1.78
SYNE2-202ENST00000344113 TLL1O43897 1013 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 TOM1O60784 492 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 HAUS5O94927 633 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 CCNB1P14635 433 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 ZNF18P17022 549 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 EXOSC9Q06265 439 aaKnown RBP3.91□□□□□ -1.78
SYNE2-202ENST00000344113 PRKG2Q13237 762 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 DHX34Q14147 1143 aaKnown RBP3.91□□□□□ -1.78
SYNE2-202ENST00000344113 ZFP69Q49AA0 526 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 TMEM53Q6P2H8 277 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 ZNF767PQ75MW2 155 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 BORCS6Q96GS4 357 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 ESYT1Q9BSJ8 1104 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 ADGRA2Q96PE1 1338 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 S100A2P29034 98 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 MAPK9P45984 424 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 TJAP1Q5JTD0 557 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 IFIT1BQ5T764 474 aaKnown RBP3.91□□□□□ -1.78
SYNE2-202ENST00000344113 TCEAL6Q6IPX3 200 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 EIF5AL1Q6IS14 154 aaKnown RBP3.91□□□□□ -1.78
SYNE2-202ENST00000344113 SMIM15Q7Z3B0 74 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 SPATA6LQ8N4H0 392 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 LZTR1Q8N653 840 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 STARD8Q92502 1023 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 NXPE2Q96DL1 559 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 ZNF175Q9Y473 711 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 MAP3K19Q56UN5 1328 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 NOS1P29475 1434 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 UGGT2Q9NYU1 1516 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 PI4K2BG5E9Z4 385 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 FGFR3P22607 806 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 YWHABP31946 246 aaKnown RBP3.91□□□□□ -1.78
SYNE2-202ENST00000344113 GSSP48637 474 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 ILDR2Q71H61 639 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 MIB1Q86YT6 1006 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 PI4K2BQ8TCG2 481 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 TNNQ9UQP3 1299 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 TRMUO75648 421 aaKnown RBP3.91□□□□□ -1.78
SYNE2-202ENST00000344113 RNASEH2AO75792 299 aaKnown RBP3.91□□□□□ -1.78
SYNE2-202ENST00000344113 SPAM1P38567 509 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 FAM91A1Q658Y4 838 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 CDKL3Q8IVW4 592 aaPredicted RBP3.91□□□□□ -1.78
SYNE2-202ENST00000344113 UHMK1Q8TAS1 419 aaKnown RBP3.91□□□□□ -1.78
SYNE2-202ENST00000344113 HM13Q8TCT9 377 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 VCPIP1Q96JH7 1222 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 PHF20Q9BVI0 1012 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 STARD13Q9Y3M8 1113 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 CARMIL3Q8ND23 1372 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 C1orf232A0A0U1RR37 186 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 CHRM5P08912 532 aaPredicted RBP3.91□□□□□ -1.78
SYNE2-202ENST00000344113 GGCXP38435 758 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 ETV5P41161 510 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 MRPS10P82664 201 aaKnown RBP3.91□□□□□ -1.78
SYNE2-202ENST00000344113 EPM2AIP1Q7L775 607 aaPredicted RBP3.91□□□□□ -1.78
SYNE2-202ENST00000344113 HELQQ8TDG4 1101 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 PSKH2Q96QS6 385 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 USP16Q9Y5T5 823 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 RFX7Q2KHR2 1363 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 ATG7O95352 703 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 MAGEA3P43357 314 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 SCNN1BP51168 640 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 AP3S2P59780 193 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 C19orf57Q0VDD7 668 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 PPM1LQ5SGD2 360 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 TRIQKQ629K1 86 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 THAP1Q9NVV9 213 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 RRN3Q9NYV6 651 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 RGS17Q9UGC6 210 aaPredicted RBP3.91□□□□□ -1.78
SYNE2-202ENST00000344113 PMPCBO75439 489 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 VAPBO95292 243 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 COX4I1P13073 169 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 ZFYVE19Q96K21 471 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 PRRG3Q9BZD7 231 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 AFF4Q9UHB7 1163 aaKnown RBP3.91□□□□□ -1.78
SYNE2-202ENST00000344113 SVILO95425 2214 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 ABCA10Q8WWZ4 1543 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 TRIM43BA6NCK2 446 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 TEX46H3BTG2 121 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 RAD51BO15315 384 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 GMFGO60234 142 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 SASH3O75995 380 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 ENDOUP21128 410 aaKnown RBP3.91□□□□□ -1.78
SYNE2-202ENST00000344113 NT5DC1Q5TFE4 455 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 DUS1LQ6P1R4 473 aaKnown RBP3.91□□□□□ -1.78
SYNE2-202ENST00000344113 HAVCR1Q96D42 359 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 OTUB1Q96FW1 271 aaPredicted RBP3.91□□□□□ -1.78
SYNE2-202ENST00000344113 SERPINB12Q96P63 405 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 MYH10P35580 1976 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 A0A1W2PQ72 361 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 CHRNA1P02708 482 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 STX4Q12846 297 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 CCDC24Q8N4L8 307 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 SH2D3CQ8N5H7 860 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 METTL6Q8TCB7 284 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 GATAD2BQ8WXI9 593 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms