RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 SMARCAD1Q9H4L7 1026 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 SAMD15Q9P1V8 674 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 A0A0G2JMZ2 1700 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 LACTBL1A8MY62 500 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 PIK3R2O00459 728 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 BRAFP15056 766 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 TMED2Q15363 201 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 ANKRD20A8PQ5CZ79 823 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 CCDC62Q6P9F0 684 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 PCSK1NQ9UHG2 260 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 NAALADL1Q9UQQ1 740 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 OTOFQ9HC10 1997 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 TCP11X1B4DZS4 312 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 B4GALT4O60513 344 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 PECAM1P16284 738 aaPredicted RBP15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 CDKN2BP42772 138 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 LMNB2Q03252 620 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 MTM1Q13496 603 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 JADE1Q6IE81 842 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 ZCCHC9Q8N567 271 aaKnown RBP15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 ALLCQ8N6M5 410 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 CPXM1Q96SM3 734 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 ADAM33Q9BZ11 813 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 ZNF518BQ9C0D4 1074 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 EFCC1Q9HA90 598 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 METTL5Q9NRN9 209 aaKnown RBP15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 PCDHGC3Q9UN70 934 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 PAPPA2Q9BXP8 1791 aa15.69■□□□□ 0.1
VIPAS39-202ENST00000343765 A0A087WZ62 844 aa15.69■□□□□ 0.1
VIPAS39-202ENST00000343765 DNALI1O14645 258 aaPredicted RBP15.69■□□□□ 0.1
VIPAS39-202ENST00000343765 BANF1O75531 89 aa15.69■□□□□ 0.1
VIPAS39-202ENST00000343765 VTNP04004 478 aa15.69■□□□□ 0.1
VIPAS39-202ENST00000343765 STAG3L1P0CL83 205 aa15.69■□□□□ 0.1
VIPAS39-202ENST00000343765 IL1R2P27930 398 aa15.69■□□□□ 0.1
VIPAS39-202ENST00000343765 ATP5DP30049 168 aa15.69■□□□□ 0.1
VIPAS39-202ENST00000343765 MPP2Q14168 576 aa15.69■□□□□ 0.1
VIPAS39-202ENST00000343765 ZKSCAN8Q15776 578 aaPredicted RBP15.69■□□□□ 0.1
VIPAS39-202ENST00000343765 KCNV1Q6PIU1 500 aa15.69■□□□□ 0.1
VIPAS39-202ENST00000343765 OPTNQ96CV9 577 aa15.69■□□□□ 0.1
VIPAS39-202ENST00000343765 FDXACB1Q9BRP7 624 aaPredicted RBP15.69■□□□□ 0.1
VIPAS39-202ENST00000343765 AKT3Q9Y243 479 aa15.69■□□□□ 0.1
VIPAS39-202ENST00000343765 HBP1O60381 514 aa15.69■□□□□ 0.1
VIPAS39-202ENST00000343765 INSRRP14616 1297 aa15.69■□□□□ 0.1
VIPAS39-202ENST00000343765 RAD23BP54727 409 aa15.69■□□□□ 0.1
VIPAS39-202ENST00000343765 VCPP55072 806 aaKnown RBP15.69■□□□□ 0.1
VIPAS39-202ENST00000343765 YWHAEP62258 255 aaKnown RBP15.69■□□□□ 0.1
VIPAS39-202ENST00000343765 LRRC38Q5VT99 294 aa15.69■□□□□ 0.1
VIPAS39-202ENST00000343765 ANKRD13AQ8IZ07 590 aa15.69■□□□□ 0.1
VIPAS39-202ENST00000343765 KIAA0319LQ8IZA0 1049 aa15.69■□□□□ 0.1
VIPAS39-202ENST00000343765 ARFGAP1Q8N6T3 406 aa15.69■□□□□ 0.1
VIPAS39-202ENST00000343765 ANKS4BQ8N8V4 417 aa15.69■□□□□ 0.1
VIPAS39-202ENST00000343765 FGFR1OP2Q9NVK5 253 aa15.69■□□□□ 0.1
VIPAS39-202ENST00000343765 RNF181Q9P0P0 153 aa15.69■□□□□ 0.1
VIPAS39-202ENST00000343765 GGT7Q9UJ14 662 aa15.69■□□□□ 0.1
VIPAS39-202ENST00000343765 PPME1Q9Y570 386 aa15.69■□□□□ 0.1
VIPAS39-202ENST00000343765 DNAJC25-GNG10A0A024R161 153 aa15.68■□□□□ 0.1
VIPAS39-202ENST00000343765 VGLL3A8MV65 326 aa15.68■□□□□ 0.1
VIPAS39-202ENST00000343765 POC1B-GALNT4F8VUJ3 575 aa15.68■□□□□ 0.1
VIPAS39-202ENST00000343765 LRCH4O75427 683 aa15.68■□□□□ 0.1
VIPAS39-202ENST00000343765 ERBB2P04626 1255 aa15.68■□□□□ 0.1
VIPAS39-202ENST00000343765 CD48P09326 243 aa15.68■□□□□ 0.1
VIPAS39-202ENST00000343765 CYP2C8P10632 490 aa15.68■□□□□ 0.1
VIPAS39-202ENST00000343765 HNRNPH1P31943 449 aaKnown RBP15.68■□□□□ 0.1
VIPAS39-202ENST00000343765 FAM182AQ5T1J6 154 aa15.68■□□□□ 0.1
VIPAS39-202ENST00000343765 EXOC8Q8IYI6 725 aa15.68■□□□□ 0.1
VIPAS39-202ENST00000343765 CNPY4Q8N129 248 aa15.68■□□□□ 0.1
VIPAS39-202ENST00000343765 EVPLQ92817 2033 aa15.68■□□□□ 0.1
VIPAS39-202ENST00000343765 EXOC1LA0A1B0GW35 172 aa15.68■□□□□ 0.1
VIPAS39-202ENST00000343765 SPDYE5A6NIY4 337 aa15.68■□□□□ 0.1
VIPAS39-202ENST00000343765 C22orf31O95567 290 aa15.68■□□□□ 0.1
VIPAS39-202ENST00000343765 ZNF286BP0CG31 522 aa15.68■□□□□ 0.1
VIPAS39-202ENST00000343765 POLR2BP30876 1174 aaKnown RBP15.68■□□□□ 0.1
VIPAS39-202ENST00000343765 CDH5P33151 784 aaPredicted RBP15.68■□□□□ 0.1
VIPAS39-202ENST00000343765 TAP1Q03518 808 aa15.68■□□□□ 0.1
VIPAS39-202ENST00000343765 TTLL4Q14679 1199 aa15.68■□□□□ 0.1
VIPAS39-202ENST00000343765 HSPH1Q92598 858 aa15.68■□□□□ 0.1
VIPAS39-202ENST00000343765 CCDC77Q9BR77 488 aa15.68■□□□□ 0.1
VIPAS39-202ENST00000343765 VPS37BQ9H9H4 285 aa15.68■□□□□ 0.1
VIPAS39-202ENST00000343765 IFT122Q9HBG6 1241 aa15.68■□□□□ 0.1
VIPAS39-202ENST00000343765 DDX56Q9NY93 547 aaKnown RBP15.68■□□□□ 0.1
VIPAS39-202ENST00000343765 STRIP2Q9ULQ0 834 aa15.68■□□□□ 0.1
VIPAS39-202ENST00000343765 TPX2Q9ULW0 747 aaKnown RBP15.68■□□□□ 0.1
VIPAS39-202ENST00000343765 TNFSF13BQ9Y275 285 aa15.68■□□□□ 0.1
VIPAS39-202ENST00000343765 LRRC37A2A6NM11 1700 aa15.68■□□□□ 0.1
VIPAS39-202ENST00000343765 M0QYV0 167 aa15.67■□□□□ 0.1
VIPAS39-202ENST00000343765 CXCL11O14625 94 aa15.67■□□□□ 0.1
VIPAS39-202ENST00000343765 ASAP2O43150 1006 aa15.67■□□□□ 0.1
VIPAS39-202ENST00000343765 CST8O60676 142 aa15.67■□□□□ 0.1
VIPAS39-202ENST00000343765 CDH16O75309 829 aa15.67■□□□□ 0.1
VIPAS39-202ENST00000343765 SCTRP47872 440 aa15.67■□□□□ 0.1
VIPAS39-202ENST00000343765 OTUD4Q01804 1114 aaKnown RBP15.67■□□□□ 0.1
VIPAS39-202ENST00000343765 TAF5Q15542 800 aa15.67■□□□□ 0.1
VIPAS39-202ENST00000343765 OASLQ15646 514 aaKnown RBP15.67■□□□□ 0.1
VIPAS39-202ENST00000343765 ZBED8Q8IZ13 594 aa15.67■□□□□ 0.1
VIPAS39-202ENST00000343765 SLC4A11Q8NBS3 891 aa15.67■□□□□ 0.1
VIPAS39-202ENST00000343765 UBA3Q8TBC4 463 aa15.67■□□□□ 0.1
VIPAS39-202ENST00000343765 PPP1R13LQ8WUF5 828 aa15.67■□□□□ 0.1
VIPAS39-202ENST00000343765 CCT6BQ92526 530 aa15.67■□□□□ 0.1
VIPAS39-202ENST00000343765 CDCA5Q96FF9 252 aa15.67■□□□□ 0.1
VIPAS39-202ENST00000343765 PAIP2Q9BPZ3 127 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms