RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 SUSD3Q96L08 255 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 LLPHQ9BRT6 129 aaKnown RBP7.84□□□□□ -1.15
ZNF540-202ENST00000343599 LRRC3Q9BY71 257 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 UXTQ9UBK9 157 aaPredicted RBP7.84□□□□□ -1.15
ZNF540-202ENST00000343599 LIMCH1Q9UPQ0 1083 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 MSRB2Q9Y3D2 182 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 SAMM50Q9Y512 469 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 SHISA7A6NL88 538 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 RFXAPO00287 272 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 TNFRSF10BO14763 440 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 ZNF202O95125 648 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 QARSP47897 775 aaKnown RBP7.83□□□□□ -1.16
ZNF540-202ENST00000343599 GNGT1P63211 74 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 CCDC15Q0P6D6 951 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 BLMHQ13867 455 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 ACAP1Q15027 740 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 CLPPQ16740 277 aaPredicted RBP7.83□□□□□ -1.16
ZNF540-202ENST00000343599 APOA5Q6Q788 366 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 TMEM139Q8IV31 216 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 APPL2Q8NEU8 664 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 OTUD7AQ8TE49 926 aaPredicted RBP7.83□□□□□ -1.16
ZNF540-202ENST00000343599 PSPC1Q8WXF1 523 aaKnown RBP7.83□□□□□ -1.16
ZNF540-202ENST00000343599 GATA6Q92908 595 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 PHKBQ93100 1093 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 SPATA17Q96L03 361 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 XPO4Q9C0E2 1151 aaKnown RBP7.83□□□□□ -1.16
ZNF540-202ENST00000343599 RETREG1Q9H6L5 497 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 METTL14Q9HCE5 456 aaKnown RBP7.83□□□□□ -1.16
ZNF540-202ENST00000343599 ANO10Q9NW15 660 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 TMEM260Q9NX78 707 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 KLF15Q9UIH9 416 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 ADAM28Q9UKQ2 775 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 STYXL1Q9Y6J8 313 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 LRRC10BA6NIK2 292 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 K7ESF4 209 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 ARHGAP6O43182 974 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 LATS1O95835 1130 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 SLC16A2P36021 539 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 PTH1RQ03431 593 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 NTRK3Q16288 839 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 USH1GQ495M9 461 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 ACCSLQ4AC99 568 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 MFSD4BQ5TF39 518 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 C6orf89Q6UWU4 347 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 REXO1Q8N1G1 1221 aaKnown RBP7.83□□□□□ -1.16
ZNF540-202ENST00000343599 DEPDC4Q8N2C3 294 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 NSMCE1Q8WV22 266 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 RFFLQ8WZ73 363 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 YIPF3Q9GZM5 350 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 UBA5Q9GZZ9 404 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 TMEM165Q9HC07 324 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 PCDH12Q9NPG4 1184 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 HOMER2Q9NSB8 354 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 CDC23Q9UJX2 597 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 C15orf41Q9Y2V0 281 aa7.83□□□□□ -1.16
ZNF540-202ENST00000343599 WDR27A2RRH5 827 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 PPP1R3GB7ZBB8 358 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 AGPSO00116 658 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 ITGA4P13612 1032 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 GJB2P29033 226 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 HSPA4P34932 840 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 SLC11A1P49279 550 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 MBTD1Q05BQ5 628 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 ADCY1Q08828 1119 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 CCDC38Q502W7 563 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 SLC44A4Q53GD3 710 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 PRR23CQ6ZRP0 262 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 RUFY3Q7L099 469 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 SCML4Q8N228 414 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 BAHD1Q8TBE0 780 aaPredicted RBP7.82□□□□□ -1.16
ZNF540-202ENST00000343599 TSC22D3Q99576 134 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 ZNF577Q9BSK1 485 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 CENPHQ9H3R5 247 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 BRD9Q9H8M2 597 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 CDHR5Q9HBB8 845 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 SENP2Q9HC62 589 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 PTPRHQ9HD43 1115 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 CDV3Q9UKY7 258 aaKnown RBP7.82□□□□□ -1.16
ZNF540-202ENST00000343599 TECTAO75443 2155 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 UBE4BO95155 1302 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 ANAPC1Q9H1A4 1944 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 GOLGA6L10A6NI86 522 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 NDUFAB1O14561 156 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 TACC1O75410 805 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 NDUFV2P19404 249 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 CDC25CP30307 473 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 HOXA11P31270 313 aaPredicted RBP7.82□□□□□ -1.16
ZNF540-202ENST00000343599 ALDH1A3P47895 512 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 FXR2P51116 673 aaKnown RBP eCLIP7.82□□□□□ -1.16
ZNF540-202ENST00000343599 XRCC4Q13426 336 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 CUL3Q13618 768 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 MYBPC3Q14896 1274 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 TMEM63BQ5T3F8 832 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 SYT13Q7L8C5 426 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 CCDC60Q8IWA6 550 aaPredicted RBP7.82□□□□□ -1.16
ZNF540-202ENST00000343599 CEP57L1Q8IYX8 460 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 SMG8Q8ND04 991 aaKnown RBP7.82□□□□□ -1.16
ZNF540-202ENST00000343599 ENGASEQ8NFI3 743 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 LNX1Q8TBB1 728 aaPredicted RBP7.82□□□□□ -1.16
ZNF540-202ENST00000343599 COG1Q8WTW3 980 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms