RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 NIF3L1Q9GZT8 377 aa13.97□□□□□ -0.17
HLA-DQA1-201ENST00000343139 CUL9Q8IWT3 2517 aa13.97□□□□□ -0.17
HLA-DQA1-201ENST00000343139 BDP1A6H8Y1 2624 aa13.97□□□□□ -0.17
HLA-DQA1-201ENST00000343139 C2CD4DB7Z1M9 353 aa13.96□□□□□ -0.17
HLA-DQA1-201ENST00000343139 ZNF197O14709 1029 aa13.96□□□□□ -0.17
HLA-DQA1-201ENST00000343139 FGF19O95750 216 aa13.96□□□□□ -0.17
HLA-DQA1-201ENST00000343139 RHOP08100 348 aa13.96□□□□□ -0.17
HLA-DQA1-201ENST00000343139 FSHRP23945 695 aa13.96□□□□□ -0.17
HLA-DQA1-201ENST00000343139 ACAT1P24752 427 aaKnown RBP13.96□□□□□ -0.17
HLA-DQA1-201ENST00000343139 FMO5P49326 533 aa13.96□□□□□ -0.17
HLA-DQA1-201ENST00000343139 CETN1Q12798 172 aa13.96□□□□□ -0.17
HLA-DQA1-201ENST00000343139 WDR44Q5JSH3 913 aa13.96□□□□□ -0.17
HLA-DQA1-201ENST00000343139 VSTM1Q6UX27 236 aa13.96□□□□□ -0.17
HLA-DQA1-201ENST00000343139 ITIH5Q86UX2 942 aa13.96□□□□□ -0.17
HLA-DQA1-201ENST00000343139 OR6B3Q8NGW1 331 aa13.96□□□□□ -0.17
HLA-DQA1-201ENST00000343139 PSMG2Q969U7 264 aa13.96□□□□□ -0.17
HLA-DQA1-201ENST00000343139 NXPE3Q969Y0 559 aa13.96□□□□□ -0.17
HLA-DQA1-201ENST00000343139 THAP9Q9H5L6 903 aa13.96□□□□□ -0.17
HLA-DQA1-201ENST00000343139 CRTAC1Q9NQ79 661 aa13.96□□□□□ -0.17
HLA-DQA1-201ENST00000343139 TMLHEQ9NVH6 421 aa13.96□□□□□ -0.17
HLA-DQA1-201ENST00000343139 CEP72Q9P209 647 aa13.96□□□□□ -0.17
HLA-DQA1-201ENST00000343139 GTF3C4Q9UKN8 822 aa13.96□□□□□ -0.17
HLA-DQA1-201ENST00000343139 POLIQ9UNA4 740 aa13.96□□□□□ -0.17
HLA-DQA1-201ENST00000343139 MYBPHLA2RUH7 354 aa13.96□□□□□ -0.18
HLA-DQA1-201ENST00000343139 A8MXQ7 604 aa13.96□□□□□ -0.18
HLA-DQA1-201ENST00000343139 TRIM21P19474 475 aaKnown RBP13.96□□□□□ -0.18
HLA-DQA1-201ENST00000343139 RPL10AP62906 217 aaKnown RBP13.96□□□□□ -0.18
HLA-DQA1-201ENST00000343139 CYP4A22Q5TCH4 519 aa13.96□□□□□ -0.18
HLA-DQA1-201ENST00000343139 SMYD5Q6GMV2 418 aa13.96□□□□□ -0.18
HLA-DQA1-201ENST00000343139 SPATA2LQ8IUW3 424 aaPredicted RBP13.96□□□□□ -0.18
HLA-DQA1-201ENST00000343139 CRYBG2Q8N1P7 616 aa13.96□□□□□ -0.18
HLA-DQA1-201ENST00000343139 B3GALNT2Q8NCR0 500 aa13.96□□□□□ -0.18
HLA-DQA1-201ENST00000343139 SEMA4DQ92854 862 aa13.96□□□□□ -0.18
HLA-DQA1-201ENST00000343139 DNAI2Q9GZS0 605 aa13.96□□□□□ -0.18
HLA-DQA1-201ENST00000343139 DNAJC25Q9H1X3 360 aa13.96□□□□□ -0.18
HLA-DQA1-201ENST00000343139 SMYD3Q9H7B4 428 aa13.96□□□□□ -0.18
HLA-DQA1-201ENST00000343139 MMRN2Q9H8L6 949 aa13.96□□□□□ -0.18
HLA-DQA1-201ENST00000343139 APOBEC3GQ9HC16 384 aaKnown RBP13.96□□□□□ -0.18
HLA-DQA1-201ENST00000343139 ABI2Q9NYB9 513 aaPredicted RBP13.96□□□□□ -0.18
HLA-DQA1-201ENST00000343139 GDE1Q9NZC3 331 aa13.96□□□□□ -0.18
HLA-DQA1-201ENST00000343139 SLC27A5Q9Y2P5 690 aa13.96□□□□□ -0.18
HLA-DQA1-201ENST00000343139 PTPN1P18031 435 aaKnown RBP13.95□□□□□ -0.18
HLA-DQA1-201ENST00000343139 VEPH1Q14D04 833 aa13.95□□□□□ -0.18
HLA-DQA1-201ENST00000343139 MGAT5BQ3V5L5 792 aa13.95□□□□□ -0.18
HLA-DQA1-201ENST00000343139 PRSS36Q5K4E3 855 aa13.95□□□□□ -0.18
HLA-DQA1-201ENST00000343139 RNF135Q8IUD6 432 aa13.95□□□□□ -0.18
HLA-DQA1-201ENST00000343139 FAM114A1Q8IWE2 563 aa13.95□□□□□ -0.18
HLA-DQA1-201ENST00000343139 TTC9BQ8N6N2 239 aa13.95□□□□□ -0.18
HLA-DQA1-201ENST00000343139 PI4K2AQ9BTU6 479 aa13.95□□□□□ -0.18
HLA-DQA1-201ENST00000343139 LRRC3Q9BY71 257 aa13.95□□□□□ -0.18
HLA-DQA1-201ENST00000343139 SDCBP2Q9H190 292 aa13.95□□□□□ -0.18
HLA-DQA1-201ENST00000343139 ASAH2Q9NR71 780 aa13.95□□□□□ -0.18
HLA-DQA1-201ENST00000343139 ANO10Q9NW15 660 aa13.95□□□□□ -0.18
HLA-DQA1-201ENST00000343139 HCFC1R1Q9NWW0 138 aa13.95□□□□□ -0.18
HLA-DQA1-201ENST00000343139 IGSF9Q9P2J2 1179 aa13.95□□□□□ -0.18
HLA-DQA1-201ENST00000343139 MAGEC2Q9UBF1 373 aaPredicted RBP13.95□□□□□ -0.18
HLA-DQA1-201ENST00000343139 CDH7Q9ULB5 785 aa13.95□□□□□ -0.18
HLA-DQA1-201ENST00000343139 NME7Q9Y5B8 376 aa13.95□□□□□ -0.18
HLA-DQA1-201ENST00000343139 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.95□□□□□ -0.18
HLA-DQA1-201ENST00000343139 PI4K2BG5E9Z4 385 aa13.94□□□□□ -0.18
HLA-DQA1-201ENST00000343139 HCRTO43612 131 aa13.94□□□□□ -0.18
HLA-DQA1-201ENST00000343139 AFPP02771 609 aaKnown RBP13.94□□□□□ -0.18
HLA-DQA1-201ENST00000343139 PDGFRBP09619 1106 aa13.94□□□□□ -0.18
HLA-DQA1-201ENST00000343139 LAMP2P13473 410 aa13.94□□□□□ -0.18
HLA-DQA1-201ENST00000343139 ALADP13716 330 aa13.94□□□□□ -0.18
HLA-DQA1-201ENST00000343139 ATF6P18850 670 aa13.94□□□□□ -0.18
HLA-DQA1-201ENST00000343139 CDH8P55286 799 aa13.94□□□□□ -0.18
HLA-DQA1-201ENST00000343139 KCNH2Q12809 1159 aa13.94□□□□□ -0.18
HLA-DQA1-201ENST00000343139 KLHL40Q2TBA0 621 aa13.94□□□□□ -0.18
HLA-DQA1-201ENST00000343139 SPOPLQ6IQ16 392 aa13.94□□□□□ -0.18
HLA-DQA1-201ENST00000343139 SASS6Q6UVJ0 657 aa13.94□□□□□ -0.18
HLA-DQA1-201ENST00000343139 PDZD4Q76G19 769 aaPredicted RBP13.94□□□□□ -0.18
HLA-DQA1-201ENST00000343139 DNAJB7Q7Z6W7 309 aaPredicted RBP13.94□□□□□ -0.18
HLA-DQA1-201ENST00000343139 TMC8Q8IU68 726 aa13.94□□□□□ -0.18
HLA-DQA1-201ENST00000343139 IRF2BP1Q8IU81 584 aa13.94□□□□□ -0.18
HLA-DQA1-201ENST00000343139 ENOX1Q8TC92 643 aaKnown RBP13.94□□□□□ -0.18
HLA-DQA1-201ENST00000343139 FGF13Q92913 245 aa13.94□□□□□ -0.18
HLA-DQA1-201ENST00000343139 PCED1BQ96HM7 432 aa13.94□□□□□ -0.18
HLA-DQA1-201ENST00000343139 SPATA17Q96L03 361 aa13.94□□□□□ -0.18
HLA-DQA1-201ENST00000343139 CNOT6LQ96LI5 555 aaKnown RBP13.94□□□□□ -0.18
HLA-DQA1-201ENST00000343139 SEPT5Q99719 369 aaPredicted RBP13.94□□□□□ -0.18
HLA-DQA1-201ENST00000343139 CORO1BQ9BR76 489 aa13.94□□□□□ -0.18
HLA-DQA1-201ENST00000343139 ELOVL4Q9GZR5 314 aa13.94□□□□□ -0.18
HLA-DQA1-201ENST00000343139 MRPS23Q9Y3D9 190 aaKnown RBP13.94□□□□□ -0.18
HLA-DQA1-201ENST00000343139 C5orf42Q9H799 3197 aa13.94□□□□□ -0.18
HLA-DQA1-201ENST00000343139 DENND4AQ7Z401 1863 aa13.93□□□□□ -0.18
HLA-DQA1-201ENST00000343139 SOBPA7XYQ1 873 aa13.93□□□□□ -0.18
HLA-DQA1-201ENST00000343139 ATP2C2O75185 946 aa13.93□□□□□ -0.18
HLA-DQA1-201ENST00000343139 CILPO75339 1184 aa13.93□□□□□ -0.18
HLA-DQA1-201ENST00000343139 CLSTN1O94985 981 aa13.93□□□□□ -0.18
HLA-DQA1-201ENST00000343139 CSH1P0DML2 217 aa13.93□□□□□ -0.18
HLA-DQA1-201ENST00000343139 CSH2P0DML3 217 aa13.93□□□□□ -0.18
HLA-DQA1-201ENST00000343139 TBXAS1P24557 533 aaPredicted RBP13.93□□□□□ -0.18
HLA-DQA1-201ENST00000343139 GBP2P32456 591 aaPredicted RBP13.93□□□□□ -0.18
HLA-DQA1-201ENST00000343139 PSMC1P62191 440 aaKnown RBP13.93□□□□□ -0.18
HLA-DQA1-201ENST00000343139 NTHL1P78549 312 aa13.93□□□□□ -0.18
HLA-DQA1-201ENST00000343139 STX1AQ16623 288 aa13.93□□□□□ -0.18
HLA-DQA1-201ENST00000343139 TPD52L1Q16890 204 aaPredicted RBP13.93□□□□□ -0.18
HLA-DQA1-201ENST00000343139 SCARA5Q6ZMJ2 495 aa13.93□□□□□ -0.18
HLA-DQA1-201ENST00000343139 MYLPFQ96A32 169 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms