RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 FAM220AQ7Z4H9 259 aa18.3■□□□□ 0.52
SMAD4-201ENST00000342988 SPATA2LQ8IUW3 424 aaPredicted RBP18.3■□□□□ 0.52
SMAD4-201ENST00000342988 RBBP8NLQ8NC74 664 aaPredicted RBP18.3■□□□□ 0.52
SMAD4-201ENST00000342988 TRIT1Q9H3H1 467 aaKnown RBP18.3■□□□□ 0.52
SMAD4-201ENST00000342988 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.3■□□□□ 0.52
SMAD4-201ENST00000342988 ADAMTS1Q9UHI8 967 aa18.3■□□□□ 0.52
SMAD4-201ENST00000342988 FAM92AA1XBS5 289 aa18.3■□□□□ 0.52
SMAD4-201ENST00000342988 MGAT4DA6NG13 374 aa18.3■□□□□ 0.52
SMAD4-201ENST00000342988 EIF4E1BA6NMX2 242 aaKnown RBP18.3■□□□□ 0.52
SMAD4-201ENST00000342988 QARSP47897 775 aaKnown RBP18.3■□□□□ 0.52
SMAD4-201ENST00000342988 DUOXA2Q1HG44 320 aa18.3■□□□□ 0.52
SMAD4-201ENST00000342988 AP3S1Q92572 193 aa18.3■□□□□ 0.52
SMAD4-201ENST00000342988 COA7Q96BR5 231 aa18.3■□□□□ 0.52
SMAD4-201ENST00000342988 USP10Q14694 798 aaKnown RBP18.3■□□□□ 0.52
SMAD4-201ENST00000342988 SMYD4Q8IYR2 804 aaPredicted RBP18.3■□□□□ 0.52
SMAD4-201ENST00000342988 ZNF671Q8TAW3 534 aa18.3■□□□□ 0.52
SMAD4-201ENST00000342988 MOV10L1Q9BXT6 1211 aaKnown RBP18.3■□□□□ 0.52
SMAD4-201ENST00000342988 MIEF1Q9NQG6 463 aa18.3■□□□□ 0.52
SMAD4-201ENST00000342988 ABT1Q9ULW3 272 aaKnown RBP18.3■□□□□ 0.52
SMAD4-201ENST00000342988 CNTRLQ7Z7A1 2325 aa18.3■□□□□ 0.52
SMAD4-201ENST00000342988 CCNA2P20248 432 aa18.3■□□□□ 0.52
SMAD4-201ENST00000342988 CCDC184Q52MB2 194 aa18.3■□□□□ 0.52
SMAD4-201ENST00000342988 SGO1Q5FBB7 561 aa18.3■□□□□ 0.52
SMAD4-201ENST00000342988 WWOXQ9NZC7 414 aa18.3■□□□□ 0.52
SMAD4-201ENST00000342988 PEX3P56589 373 aa18.29■□□□□ 0.52
SMAD4-201ENST00000342988 PRMT9Q6P2P2 845 aa18.29■□□□□ 0.52
SMAD4-201ENST00000342988 ZNF594Q96JF6 807 aaPredicted RBP18.29■□□□□ 0.52
SMAD4-201ENST00000342988 CCNE1P24864 410 aa18.29■□□□□ 0.52
SMAD4-201ENST00000342988 EIF4A1P60842 406 aaKnown RBP18.29■□□□□ 0.52
SMAD4-201ENST00000342988 PID1Q7Z2X4 250 aa18.29■□□□□ 0.52
SMAD4-201ENST00000342988 SAE1Q9UBE0 346 aaPredicted RBP18.29■□□□□ 0.52
SMAD4-201ENST00000342988 STARD13Q9Y3M8 1113 aa18.29■□□□□ 0.52
SMAD4-201ENST00000342988 CD109Q6YHK3 1445 aa18.29■□□□□ 0.52
SMAD4-201ENST00000342988 PDIA3P30101 505 aaKnown RBP18.29■□□□□ 0.52
SMAD4-201ENST00000342988 FBXO38Q6PIJ6 1188 aa18.29■□□□□ 0.52
SMAD4-201ENST00000342988 CNKSR1Q969H4 720 aa18.29■□□□□ 0.52
SMAD4-201ENST00000342988 TMEM138Q9NPI0 162 aa18.29■□□□□ 0.52
SMAD4-201ENST00000342988 MYL12BO14950 172 aa18.29■□□□□ 0.52
SMAD4-201ENST00000342988 FGRP09769 529 aa18.29■□□□□ 0.52
SMAD4-201ENST00000342988 EXOSC10Q01780 885 aaKnown RBP18.29■□□□□ 0.52
SMAD4-201ENST00000342988 CCDC33Q8N5R6 958 aa18.29■□□□□ 0.52
SMAD4-201ENST00000342988 CCDC3Q9BQI4 270 aa18.29■□□□□ 0.52
SMAD4-201ENST00000342988 MTIF3Q9H2K0 278 aaKnown RBP18.29■□□□□ 0.52
SMAD4-201ENST00000342988 CPB1P15086 417 aa18.29■□□□□ 0.52
SMAD4-201ENST00000342988 BTDP43251 543 aa18.29■□□□□ 0.52
SMAD4-201ENST00000342988 CAMKK1Q8N5S9 505 aa18.29■□□□□ 0.52
SMAD4-201ENST00000342988 SNRNP27Q8WVK2 155 aaKnown RBP18.29■□□□□ 0.52
SMAD4-201ENST00000342988 MIEF2Q96C03 454 aa18.29■□□□□ 0.52
SMAD4-201ENST00000342988 WDR41Q9HAD4 459 aa18.29■□□□□ 0.52
SMAD4-201ENST00000342988 CCNIQ14094 377 aa18.29■□□□□ 0.52
SMAD4-201ENST00000342988 SDR42E1Q8WUS8 393 aa18.29■□□□□ 0.52
SMAD4-201ENST00000342988 EFCAB1Q9HAE3 211 aa18.29■□□□□ 0.52
SMAD4-201ENST00000342988 LNPEPQ9UIQ6 1025 aa18.29■□□□□ 0.52
SMAD4-201ENST00000342988 KYNUQ16719 465 aa18.29■□□□□ 0.52
SMAD4-201ENST00000342988 ATG16L2Q8NAA4 619 aa18.29■□□□□ 0.52
SMAD4-201ENST00000342988 C1QTNF1Q9BXJ1 281 aa18.29■□□□□ 0.52
SMAD4-201ENST00000342988 TUBA8Q9NY65 449 aaPredicted RBP18.29■□□□□ 0.52
SMAD4-201ENST00000342988 SYNJ1O43426 1573 aa18.28■□□□□ 0.52
SMAD4-201ENST00000342988 PNMA6FA0A0J9YX94 578 aa18.28■□□□□ 0.52
SMAD4-201ENST00000342988 MFAP3LO75121 409 aa18.28■□□□□ 0.52
SMAD4-201ENST00000342988 MZF1P28698 734 aaPredicted RBP18.28■□□□□ 0.52
SMAD4-201ENST00000342988 PTGES3Q15185 160 aaKnown RBP18.28■□□□□ 0.52
SMAD4-201ENST00000342988 V9GYQ6 96 aa18.28■□□□□ 0.52
SMAD4-201ENST00000342988 NUDT2P50583 147 aa18.28■□□□□ 0.52
SMAD4-201ENST00000342988 RPS8P62241 208 aaKnown RBP18.28■□□□□ 0.52
SMAD4-201ENST00000342988 RTKN2Q8IZC4 609 aa18.28■□□□□ 0.52
SMAD4-201ENST00000342988 ZSWIM6Q9HCJ5 1215 aa18.28■□□□□ 0.52
SMAD4-201ENST00000342988 RABGEF1Q9UJ41 708 aa18.28■□□□□ 0.52
SMAD4-201ENST00000342988 C2orf81A6NN90 581 aa18.28■□□□□ 0.52
SMAD4-201ENST00000342988 KLHL41O60662 606 aa18.28■□□□□ 0.52
SMAD4-201ENST00000342988 CYP2D6P10635 497 aa18.28■□□□□ 0.52
SMAD4-201ENST00000342988 HSF2Q03933 536 aa18.28■□□□□ 0.52
SMAD4-201ENST00000342988 ZNF846Q147U1 533 aa18.28■□□□□ 0.52
SMAD4-201ENST00000342988 ILKAPQ9H0C8 392 aaPredicted RBP18.28■□□□□ 0.52
SMAD4-201ENST00000342988 FBXO28Q9NVF7 368 aa18.28■□□□□ 0.52
SMAD4-201ENST00000342988 APOL5Q9BWW9 433 aa18.28■□□□□ 0.52
SMAD4-201ENST00000342988 FRMD8Q9BZ67 464 aaPredicted RBP18.28■□□□□ 0.52
SMAD4-201ENST00000342988 CAPN10Q9HC96 672 aa18.28■□□□□ 0.52
SMAD4-201ENST00000342988 DKK3Q9UBP4 350 aa18.28■□□□□ 0.52
SMAD4-201ENST00000342988 KDM5BQ9UGL1 1544 aa18.28■□□□□ 0.52
SMAD4-201ENST00000342988 F5H423 210 aaPredicted RBP18.28■□□□□ 0.52
SMAD4-201ENST00000342988 KMOO15229 486 aa18.28■□□□□ 0.52
SMAD4-201ENST00000342988 BAIAP3O94812 1187 aa18.28■□□□□ 0.52
SMAD4-201ENST00000342988 OR6B1O95007 311 aa18.28■□□□□ 0.52
SMAD4-201ENST00000342988 UBTFL6P0CB48 400 aaPredicted RBP18.28■□□□□ 0.52
SMAD4-201ENST00000342988 TRAF3Q13114 568 aa18.28■□□□□ 0.52
SMAD4-201ENST00000342988 RAD54BQ9Y620 910 aa18.28■□□□□ 0.52
SMAD4-201ENST00000342988 CASZ1Q86V15 1759 aa18.28■□□□□ 0.52
SMAD4-201ENST00000342988 STAT3P40763 770 aa18.28■□□□□ 0.52
SMAD4-201ENST00000342988 SPICE1Q8N0Z3 855 aa18.28■□□□□ 0.52
SMAD4-201ENST00000342988 SETD9Q8NE22 299 aa18.28■□□□□ 0.52
SMAD4-201ENST00000342988 SH3BP1Q9Y3L3 701 aa18.28■□□□□ 0.52
SMAD4-201ENST00000342988 ZNF614Q8N883 585 aa18.28■□□□□ 0.52
SMAD4-201ENST00000342988 FAM49AQ9H0Q0 323 aaPredicted RBP18.28■□□□□ 0.52
SMAD4-201ENST00000342988 TRMT6Q9UJA5 497 aaKnown RBP18.28■□□□□ 0.52
SMAD4-201ENST00000342988 CRKP46108 304 aa18.27■□□□□ 0.52
SMAD4-201ENST00000342988 ITGB3BPQ13352 177 aaPredicted RBP18.27■□□□□ 0.52
SMAD4-201ENST00000342988 KRT24Q2M2I5 525 aa18.27■□□□□ 0.52
SMAD4-201ENST00000342988 SEC16BQ96JE7 1060 aa18.27■□□□□ 0.52
SMAD4-201ENST00000342988 RNF112Q9ULX5 631 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms