RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 FBP2O00757 339 aa19.4■□□□□ 0.7
SMPD1-201ENST00000342245 PPARGP37231 505 aaPredicted RBP19.4■□□□□ 0.7
SMPD1-201ENST00000342245 VCPP55072 806 aaKnown RBP19.4■□□□□ 0.7
SMPD1-201ENST00000342245 MYL7Q01449 175 aa19.4■□□□□ 0.7
SMPD1-201ENST00000342245 TLR1Q15399 786 aa19.4■□□□□ 0.7
SMPD1-201ENST00000342245 GSTCDQ8NEC7 633 aa19.4■□□□□ 0.7
SMPD1-201ENST00000342245 GIPC3Q8TF64 312 aa19.4■□□□□ 0.7
SMPD1-201ENST00000342245 SLC20A1Q8WUM9 679 aa19.4■□□□□ 0.7
SMPD1-201ENST00000342245 CGREF1Q99674 301 aa19.4■□□□□ 0.7
SMPD1-201ENST00000342245 IPO5O00410 1097 aaKnown RBP19.4■□□□□ 0.7
SMPD1-201ENST00000342245 EIF3DO15371 548 aaKnown RBP eCLIP19.4■□□□□ 0.7
SMPD1-201ENST00000342245 CYP2D6P10635 497 aa19.4■□□□□ 0.7
SMPD1-201ENST00000342245 KDSRQ06136 332 aa19.4■□□□□ 0.7
SMPD1-201ENST00000342245 PTP4A2Q12974 167 aa19.4■□□□□ 0.7
SMPD1-201ENST00000342245 MORF4L2Q15014 288 aa19.4■□□□□ 0.7
SMPD1-201ENST00000342245 SPTY2D1Q68D10 685 aaPredicted RBP19.4■□□□□ 0.7
SMPD1-201ENST00000342245 PPP1R18Q6NYC8 613 aa19.4■□□□□ 0.7
SMPD1-201ENST00000342245 ZNF804AQ7Z570 1209 aa19.4■□□□□ 0.7
SMPD1-201ENST00000342245 PRPF39Q86UA1 669 aaKnown RBP19.4■□□□□ 0.7
SMPD1-201ENST00000342245 ETNPPLQ8TBG4 499 aa19.4■□□□□ 0.7
SMPD1-201ENST00000342245 C7orf26Q96N11 449 aa19.4■□□□□ 0.7
SMPD1-201ENST00000342245 CCDC106Q9BWC9 280 aa19.4■□□□□ 0.7
SMPD1-201ENST00000342245 RRN3Q9NYV6 651 aa19.4■□□□□ 0.7
SMPD1-201ENST00000342245 STRIP2Q9ULQ0 834 aa19.4■□□□□ 0.7
SMPD1-201ENST00000342245 ARHGAP42A6NI28 874 aa19.39■□□□□ 0.69
SMPD1-201ENST00000342245 H3BNX3 289 aa19.39■□□□□ 0.69
SMPD1-201ENST00000342245 I3L4J1 428 aa19.39■□□□□ 0.69
SMPD1-201ENST00000342245 EDIL3O43854 480 aa19.39■□□□□ 0.69
SMPD1-201ENST00000342245 S100A1P23297 94 aa19.39■□□□□ 0.69
SMPD1-201ENST00000342245 PDIA2Q13087 525 aaKnown RBP19.39■□□□□ 0.69
SMPD1-201ENST00000342245 ZNF423Q2M1K9 1284 aa19.39■□□□□ 0.69
SMPD1-201ENST00000342245 GRAMD1BQ3KR37 738 aa19.39■□□□□ 0.69
SMPD1-201ENST00000342245 ALYREFQ86V81 257 aaKnown RBP19.39■□□□□ 0.69
SMPD1-201ENST00000342245 RTKN2Q8IZC4 609 aa19.39■□□□□ 0.69
SMPD1-201ENST00000342245 SCHIP1Q9P0W5 487 aaPredicted RBP19.39■□□□□ 0.69
SMPD1-201ENST00000342245 ZBTB1Q9Y2K1 713 aa19.39■□□□□ 0.69
SMPD1-201ENST00000342245 SQORQ9Y6N5 450 aa19.39■□□□□ 0.69
SMPD1-201ENST00000342245 FAM58BPP0C7Q3 252 aa19.39■□□□□ 0.69
SMPD1-201ENST00000342245 ADSSP30520 456 aa19.39■□□□□ 0.69
SMPD1-201ENST00000342245 RWDD4Q6NW29 188 aaKnown RBP19.39■□□□□ 0.69
SMPD1-201ENST00000342245 POTEHQ6S545 545 aa19.39■□□□□ 0.69
SMPD1-201ENST00000342245 NANOGNBQ7Z5D8 188 aa19.39■□□□□ 0.69
SMPD1-201ENST00000342245 ZNF444Q8N0Y2 327 aaPredicted RBP19.39■□□□□ 0.69
SMPD1-201ENST00000342245 CASP10Q92851 521 aa19.39■□□□□ 0.69
SMPD1-201ENST00000342245 DHRS4Q9BTZ2 278 aa19.39■□□□□ 0.69
SMPD1-201ENST00000342245 NACA2Q9H009 215 aa19.39■□□□□ 0.69
SMPD1-201ENST00000342245 POTEB3A0JP26 581 aa19.38■□□□□ 0.69
SMPD1-201ENST00000342245 LPXNO60711 386 aa19.38■□□□□ 0.69
SMPD1-201ENST00000342245 SERPINA6P08185 405 aa19.38■□□□□ 0.69
SMPD1-201ENST00000342245 GAP43P17677 238 aa19.38■□□□□ 0.69
SMPD1-201ENST00000342245 AOC1P19801 751 aa19.38■□□□□ 0.69
SMPD1-201ENST00000342245 NAA20P61599 178 aa19.38■□□□□ 0.69
SMPD1-201ENST00000342245 CETN1Q12798 172 aa19.38■□□□□ 0.69
SMPD1-201ENST00000342245 ITGA7Q13683 1181 aa19.38■□□□□ 0.69
SMPD1-201ENST00000342245 INAQ16352 499 aa19.38■□□□□ 0.69
SMPD1-201ENST00000342245 POTEBQ6S5H4 581 aa19.38■□□□□ 0.69
SMPD1-201ENST00000342245 RNF111Q6ZNA4 994 aa19.38■□□□□ 0.69
SMPD1-201ENST00000342245 GSTA5Q7RTV2 222 aa19.38■□□□□ 0.69
SMPD1-201ENST00000342245 SLC25A41Q8N5S1 370 aa19.38■□□□□ 0.69
SMPD1-201ENST00000342245 FBXO27Q8NI29 283 aa19.38■□□□□ 0.69
SMPD1-201ENST00000342245 BTG4Q9NY30 223 aa19.38■□□□□ 0.69
SMPD1-201ENST00000342245 MYPNQ86TC9 1320 aa19.38■□□□□ 0.69
SMPD1-201ENST00000342245 DNAJA2O60884 412 aa19.37■□□□□ 0.69
SMPD1-201ENST00000342245 POLD1P28340 1107 aa19.37■□□□□ 0.69
SMPD1-201ENST00000342245 CPOXP36551 454 aa19.37■□□□□ 0.69
SMPD1-201ENST00000342245 TMED10P49755 219 aaKnown RBP19.37■□□□□ 0.69
SMPD1-201ENST00000342245 CCNIQ14094 377 aa19.37■□□□□ 0.69
SMPD1-201ENST00000342245 C12orf60Q5U649 245 aa19.37■□□□□ 0.69
SMPD1-201ENST00000342245 SLC5A5Q92911 643 aa19.37■□□□□ 0.69
SMPD1-201ENST00000342245 NSUN4Q96CB9 384 aaKnown RBP19.37■□□□□ 0.69
SMPD1-201ENST00000342245 EXOC7Q9UPT5 735 aa19.37■□□□□ 0.69
SMPD1-201ENST00000342245 FRMD4BQ9Y2L6 1034 aa19.37■□□□□ 0.69
SMPD1-201ENST00000342245 PPME1Q9Y570 386 aa19.37■□□□□ 0.69
SMPD1-201ENST00000342245 HEY1Q9Y5J3 304 aa19.37■□□□□ 0.69
SMPD1-201ENST00000342245 ABCA3Q99758 1704 aa19.37■□□□□ 0.69
SMPD1-201ENST00000342245 MYO3BQ8WXR4 1341 aa19.37■□□□□ 0.69
SMPD1-201ENST00000342245 ATRNL1Q5VV63 1379 aa19.37■□□□□ 0.69
SMPD1-201ENST00000342245 FAM237BA0A1B0GVD1 139 aa19.37■□□□□ 0.69
SMPD1-201ENST00000342245 CLIC2O15247 247 aa19.37■□□□□ 0.69
SMPD1-201ENST00000342245 ITM2AO43736 263 aa19.37■□□□□ 0.69
SMPD1-201ENST00000342245 GOLGA8HP0CJ92 632 aa19.37■□□□□ 0.69
SMPD1-201ENST00000342245 CYP19A1P11511 503 aaPredicted RBP19.37■□□□□ 0.69
SMPD1-201ENST00000342245 SERPINB6P35237 376 aa19.37■□□□□ 0.69
SMPD1-201ENST00000342245 ALDH1A3P47895 512 aa19.37■□□□□ 0.69
SMPD1-201ENST00000342245 EVX2Q03828 476 aa19.37■□□□□ 0.69
SMPD1-201ENST00000342245 KLF1Q13351 362 aaPredicted RBP19.37■□□□□ 0.69
SMPD1-201ENST00000342245 CNGA3Q16281 694 aa19.37■□□□□ 0.69
SMPD1-201ENST00000342245 ATG16L1Q676U5 607 aa19.37■□□□□ 0.69
SMPD1-201ENST00000342245 OGFOD1Q8N543 542 aa19.37■□□□□ 0.69
SMPD1-201ENST00000342245 GCNAQ96QF7 691 aa19.37■□□□□ 0.69
SMPD1-201ENST00000342245 PIGSQ96S52 555 aa19.37■□□□□ 0.69
SMPD1-201ENST00000342245 ANO3Q9BYT9 981 aa19.37■□□□□ 0.69
SMPD1-201ENST00000342245 GPCPD1Q9NPB8 672 aa19.37■□□□□ 0.69
SMPD1-201ENST00000342245 OLFML3Q9NRN5 406 aa19.37■□□□□ 0.69
SMPD1-201ENST00000342245 MCM9Q9NXL9 1143 aa19.37■□□□□ 0.69
SMPD1-201ENST00000342245 UBAP1Q9NZ09 502 aa19.37■□□□□ 0.69
SMPD1-201ENST00000342245 SLC17A7Q9P2U7 560 aa19.37■□□□□ 0.69
SMPD1-201ENST00000342245 DNM3Q9UQ16 869 aa19.37■□□□□ 0.69
SMPD1-201ENST00000342245 RSPH10B2B2RC85 870 aa19.36■□□□□ 0.69
SMPD1-201ENST00000342245 GCNT3O95395 438 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms