RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 PCDHB2Q9Y5E7 798 aa13.81□□□□□ -0.2
COL18A1-201ENST00000342220 ANKRD62A6NC57 917 aa13.81□□□□□ -0.2
COL18A1-201ENST00000342220 A6NNZ2 444 aa13.81□□□□□ -0.2
COL18A1-201ENST00000342220 P4HA2O15460 535 aa13.81□□□□□ -0.2
COL18A1-201ENST00000342220 RTN2O75298 545 aa13.81□□□□□ -0.2
COL18A1-201ENST00000342220 UPP2O95045 317 aa13.81□□□□□ -0.2
COL18A1-201ENST00000342220 BCAR1P56945 870 aa13.81□□□□□ -0.2
COL18A1-201ENST00000342220 TUBB8Q3ZCM7 444 aa13.81□□□□□ -0.2
COL18A1-201ENST00000342220 SCYL2Q6P3W7 929 aa13.81□□□□□ -0.2
COL18A1-201ENST00000342220 RSPH3Q86UC2 560 aa13.81□□□□□ -0.2
COL18A1-201ENST00000342220 MICAL1Q8TDZ2 1067 aa13.81□□□□□ -0.2
COL18A1-201ENST00000342220 CCDC113Q9H0I3 377 aa13.81□□□□□ -0.2
COL18A1-201ENST00000342220 EPN3Q9H201 632 aa13.81□□□□□ -0.2
COL18A1-201ENST00000342220 DDX20Q9UHI6 824 aaKnown RBP13.81□□□□□ -0.2
COL18A1-201ENST00000342220 ANKRD33BA6NCL7 494 aa13.8□□□□□ -0.2
COL18A1-201ENST00000342220 UNCXA6NJT0 531 aa13.8□□□□□ -0.2
COL18A1-201ENST00000342220 HMGB1P1B2RPK0 211 aaPredicted RBP13.8□□□□□ -0.2
COL18A1-201ENST00000342220 DAPK3O43293 454 aa13.8□□□□□ -0.2
COL18A1-201ENST00000342220 PQBP1O60828 265 aaKnown RBP13.8□□□□□ -0.2
COL18A1-201ENST00000342220 DUSP11O75319 330 aaKnown RBP13.8□□□□□ -0.2
COL18A1-201ENST00000342220 DARSP14868 501 aaKnown RBP13.8□□□□□ -0.2
COL18A1-201ENST00000342220 ATF7P17544 494 aaPredicted RBP13.8□□□□□ -0.2
COL18A1-201ENST00000342220 MDH1P40925 334 aaKnown RBP13.8□□□□□ -0.2
COL18A1-201ENST00000342220 DYNLT1P63172 113 aa13.8□□□□□ -0.2
COL18A1-201ENST00000342220 TRIP13Q15645 432 aaPredicted RBP13.8□□□□□ -0.2
COL18A1-201ENST00000342220 SMTNL2Q2TAL5 461 aa13.8□□□□□ -0.2
COL18A1-201ENST00000342220 RNF25Q96BH1 459 aaPredicted RBP13.8□□□□□ -0.2
COL18A1-201ENST00000342220 CELF4Q9BZC1 486 aaKnown RBP13.8□□□□□ -0.2
COL18A1-201ENST00000342220 PASKQ96RG2 1323 aa13.8□□□□□ -0.2
COL18A1-201ENST00000342220 A8MXQ7 604 aa13.8□□□□□ -0.2
COL18A1-201ENST00000342220 RWDD2BP57060 319 aa13.8□□□□□ -0.2
COL18A1-201ENST00000342220 CUL1Q13616 776 aa13.8□□□□□ -0.2
COL18A1-201ENST00000342220 ZNF296Q8WUU4 475 aaPredicted RBP13.8□□□□□ -0.2
COL18A1-201ENST00000342220 TFAP2BQ92481 460 aa13.8□□□□□ -0.2
COL18A1-201ENST00000342220 TWNKQ96RR1 684 aa13.8□□□□□ -0.2
COL18A1-201ENST00000342220 KATNAL1Q9BW62 490 aa13.8□□□□□ -0.2
COL18A1-201ENST00000342220 STXBP5LQ9Y2K9 1186 aa13.8□□□□□ -0.2
COL18A1-201ENST00000342220 GOLGA6L10A6NI86 522 aa13.8□□□□□ -0.2
COL18A1-201ENST00000342220 H0YGN5 161 aa13.8□□□□□ -0.2
COL18A1-201ENST00000342220 TTI1O43156 1089 aa13.8□□□□□ -0.2
COL18A1-201ENST00000342220 SEPT4O43236 478 aa13.8□□□□□ -0.2
COL18A1-201ENST00000342220 ALDH1A1P00352 501 aa13.8□□□□□ -0.2
COL18A1-201ENST00000342220 CTNNA1P35221 906 aaKnown RBP13.8□□□□□ -0.2
COL18A1-201ENST00000342220 CDCA2Q69YH5 1023 aaPredicted RBP13.8□□□□□ -0.2
COL18A1-201ENST00000342220 SLC27A1Q6PCB7 646 aa13.8□□□□□ -0.2
COL18A1-201ENST00000342220 SLFN11Q7Z7L1 901 aa13.8□□□□□ -0.2
COL18A1-201ENST00000342220 NT5DC3Q86UY8 548 aa13.8□□□□□ -0.2
COL18A1-201ENST00000342220 ERICH1Q86X53 443 aa13.8□□□□□ -0.2
COL18A1-201ENST00000342220 ZNF473Q8WTR7 871 aaKnown RBP13.8□□□□□ -0.2
COL18A1-201ENST00000342220 UBLCP1Q8WVY7 318 aaPredicted RBP13.8□□□□□ -0.2
COL18A1-201ENST00000342220 MCEEQ96PE7 176 aa13.8□□□□□ -0.2
COL18A1-201ENST00000342220 ZWILCHQ9H900 591 aa13.8□□□□□ -0.2
COL18A1-201ENST00000342220 FBXL5Q9UKA1 691 aa13.8□□□□□ -0.2
COL18A1-201ENST00000342220 NFS1Q9Y697 457 aa13.8□□□□□ -0.2
COL18A1-201ENST00000342220 INHAP05111 366 aa13.79□□□□□ -0.2
COL18A1-201ENST00000342220 MYZAPP0CAP1 466 aa13.79□□□□□ -0.2
COL18A1-201ENST00000342220 NUMBP49757 651 aa13.79□□□□□ -0.2
COL18A1-201ENST00000342220 NDST1P52848 882 aa13.79□□□□□ -0.2
COL18A1-201ENST00000342220 PLCB3Q01970 1234 aa13.79□□□□□ -0.2
COL18A1-201ENST00000342220 B4GALNT4Q76KP1 1039 aa13.79□□□□□ -0.2
COL18A1-201ENST00000342220 DEFB118Q96PH6 123 aa13.79□□□□□ -0.2
COL18A1-201ENST00000342220 PPP1R12CQ9BZL4 782 aa13.79□□□□□ -0.2
COL18A1-201ENST00000342220 RANBP2P49792 3224 aaKnown RBP13.79□□□□□ -0.2
COL18A1-201ENST00000342220 ASS1P00966 412 aaKnown RBP13.79□□□□□ -0.2
COL18A1-201ENST00000342220 HOXA11P31270 313 aaPredicted RBP13.79□□□□□ -0.2
COL18A1-201ENST00000342220 ARPP19P56211 112 aa13.79□□□□□ -0.2
COL18A1-201ENST00000342220 ATP11AP98196 1134 aa13.79□□□□□ -0.2
COL18A1-201ENST00000342220 ZNF844Q08AG5 666 aa13.79□□□□□ -0.2
COL18A1-201ENST00000342220 ZNF618Q5T7W0 954 aa13.79□□□□□ -0.2
COL18A1-201ENST00000342220 EMC10Q5UCC4 262 aa13.79□□□□□ -0.2
COL18A1-201ENST00000342220 OR6B2Q6IFH4 312 aa13.79□□□□□ -0.2
COL18A1-201ENST00000342220 RNF180Q86T96 592 aa13.79□□□□□ -0.2
COL18A1-201ENST00000342220 CCT8L2Q96SF2 557 aa13.79□□□□□ -0.2
COL18A1-201ENST00000342220 PAIP2Q9BPZ3 127 aaKnown RBP13.79□□□□□ -0.2
COL18A1-201ENST00000342220 SIX4Q9UIU6 781 aa13.79□□□□□ -0.2
COL18A1-201ENST00000342220 NR2E1Q9Y466 385 aa13.79□□□□□ -0.2
COL18A1-201ENST00000342220 MAP3K6O95382 1288 aa13.79□□□□□ -0.2
COL18A1-201ENST00000342220 HOXD10P28358 340 aa13.79□□□□□ -0.2
COL18A1-201ENST00000342220 ABCD1P33897 745 aa13.79□□□□□ -0.2
COL18A1-201ENST00000342220 CA8P35219 290 aa13.79□□□□□ -0.2
COL18A1-201ENST00000342220 SCNN1GP51170 649 aa13.79□□□□□ -0.2
COL18A1-201ENST00000342220 RPL7AP62424 266 aaKnown RBP13.79□□□□□ -0.2
COL18A1-201ENST00000342220 MYO1EQ12965 1108 aa13.79□□□□□ -0.2
COL18A1-201ENST00000342220 ATP13A4Q4VNC1 1196 aa13.79□□□□□ -0.2
COL18A1-201ENST00000342220 KCNT1Q5JUK3 1230 aa13.79□□□□□ -0.2
COL18A1-201ENST00000342220 LIN9Q5TKA1 542 aa13.79□□□□□ -0.2
COL18A1-201ENST00000342220 NLRP14Q86W24 1093 aa13.79□□□□□ -0.2
COL18A1-201ENST00000342220 FAM149B1Q96BN6 582 aa13.79□□□□□ -0.2
COL18A1-201ENST00000342220 LRRC45Q96CN5 670 aa13.79□□□□□ -0.2
COL18A1-201ENST00000342220 RNF208Q9H0X6 261 aa13.79□□□□□ -0.2
COL18A1-201ENST00000342220 AGO3Q9H9G7 860 aaKnown RBP13.79□□□□□ -0.2
COL18A1-201ENST00000342220 PPANQ9NQ55 473 aaKnown RBP13.79□□□□□ -0.2
COL18A1-201ENST00000342220 STARD7Q9NQZ5 370 aa13.79□□□□□ -0.2
COL18A1-201ENST00000342220 PRG3Q9Y2Y8 225 aaPredicted RBP13.79□□□□□ -0.2
COL18A1-201ENST00000342220 RPS6KL1Q9Y6S9 549 aa13.79□□□□□ -0.2
COL18A1-201ENST00000342220 SCN4AP35499 1836 aa13.78□□□□□ -0.2
COL18A1-201ENST00000342220 MROH7Q68CQ1 1323 aa13.78□□□□□ -0.2
COL18A1-201ENST00000342220 ADGRA2Q96PE1 1338 aa13.78□□□□□ -0.2
COL18A1-201ENST00000342220 E7EVH7 732 aa13.78□□□□□ -0.2
COL18A1-201ENST00000342220 O00370 1275 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms