RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 ZNF618Q5T7W0 954 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 C1orf228Q6PIY5 440 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 BCAS4Q8TDM0 211 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 EPS8L3Q8TE67 593 aaKnown RBP10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 XYLT2Q9H1B5 865 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 RNF8O76064 485 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 ERBB2P04626 1255 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 PSEN2P49810 448 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 SEC24CP53992 1094 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 PMS2P54278 862 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 UAP1Q16222 522 aaPredicted RBP10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 MAMDC4Q6UXC1 1216 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 TMEM176AQ96HP8 235 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 FAM81BQ96LP2 452 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 KCNK9Q9NPC2 374 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 IP6K2Q9UHH9 426 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 ANAPC5Q9UJX4 755 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 TMEM59LQ9UK28 342 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 WDR81Q562E7 1941 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 LOXHD1Q8IVV2 1947 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 FAM189A1O60320 539 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 BANF1O75531 89 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 IL18RAPO95256 599 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 CYP1A1P04798 512 aaPredicted RBP10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 ITGA8P53708 1063 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 RAD23BP54727 409 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 FSCN1Q16658 493 aaKnown RBP10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 MARCH8Q5T0T0 291 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 TRIM72Q6ZMU5 477 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 ZNF572Q7Z3I7 529 aaPredicted RBP10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 TMC3Q7Z5M5 1100 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 ZNF677Q86XU0 584 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 EXOC4Q96A65 974 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 DNPEPQ9ULA0 475 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 HTTP42858 3142 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 GOLGA8KD6RF30 607 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 E7EVH7 732 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 M0QZ92 97 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 ABLIM1O14639 778 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 MED7O43513 233 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 MCF2P10911 925 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 PDGFRAP16234 1089 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 MMP8P22894 467 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 CHKAP35790 457 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 GPS1Q13098 491 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 MMRN1Q13201 1228 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 KRT81Q14533 505 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 KYNUQ16719 465 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 P3H1Q32P28 736 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 GLIS1Q8NBF1 620 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 DYDC1Q8WWB3 177 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 CFAP57Q96MR6 1250 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 MAK16Q9BXY0 300 aaKnown RBP10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 VIPAS39Q9H9C1 493 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 PCDH10Q9P2E7 1040 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 NDUFAB1O14561 156 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 MYBL1P10243 752 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 HIC1Q14526 733 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 FAXCQ5TGI0 409 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 NOTUMQ6P988 496 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 ANKMY2Q8IV38 441 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 SLC4A11Q8NBS3 891 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 NT5C1AQ9BXI3 368 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 SNX25Q9H3E2 840 aa10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 MAGED2Q9UNF1 606 aaPredicted RBP10.73□□□□□ -0.69
RBFOX1-202ENST00000340209 CASTOR2A6NHX0 329 aa10.72□□□□□ -0.69
RBFOX1-202ENST00000340209 POC1B-GALNT4F8VUJ3 575 aa10.72□□□□□ -0.69
RBFOX1-202ENST00000340209 CST8O60676 142 aa10.72□□□□□ -0.69
RBFOX1-202ENST00000340209 IGFBP6P24592 240 aaPredicted RBP10.72□□□□□ -0.69
RBFOX1-202ENST00000340209 AP3M2P53677 418 aa10.72□□□□□ -0.69
RBFOX1-202ENST00000340209 CDH6P55285 790 aa10.72□□□□□ -0.69
RBFOX1-202ENST00000340209 PPP1R26Q5T8A7 1209 aaPredicted RBP10.72□□□□□ -0.69
RBFOX1-202ENST00000340209 IZUMO3Q5VZ72 239 aa10.72□□□□□ -0.69
RBFOX1-202ENST00000340209 BSPRYQ5W0U4 402 aa10.72□□□□□ -0.69
RBFOX1-202ENST00000340209 ALS2CLQ60I27 953 aa10.72□□□□□ -0.69
RBFOX1-202ENST00000340209 CTU1Q7Z7A3 348 aaKnown RBP10.72□□□□□ -0.69
RBFOX1-202ENST00000340209 WDTC1Q8N5D0 677 aa10.72□□□□□ -0.69
RBFOX1-202ENST00000340209 TTC16Q8NEE8 873 aa10.72□□□□□ -0.69
RBFOX1-202ENST00000340209 CAVIN3Q969G5 261 aa10.72□□□□□ -0.69
RBFOX1-202ENST00000340209 VPS37BQ9H9H4 285 aa10.72□□□□□ -0.69
RBFOX1-202ENST00000340209 C17orf102A2RUQ5 167 aa10.72□□□□□ -0.69
RBFOX1-202ENST00000340209 DCAF8L1A6NGE4 600 aa10.72□□□□□ -0.69
RBFOX1-202ENST00000340209 RGS16O15492 202 aaPredicted RBP10.72□□□□□ -0.69
RBFOX1-202ENST00000340209 CAND2O75155 1236 aa10.72□□□□□ -0.69
RBFOX1-202ENST00000340209 EIF4BP23588 611 aaKnown RBP10.72□□□□□ -0.69
RBFOX1-202ENST00000340209 ECHS1P30084 290 aa10.72□□□□□ -0.69
RBFOX1-202ENST00000340209 ARSEP51690 589 aa10.72□□□□□ -0.69
RBFOX1-202ENST00000340209 BASP1P80723 227 aaKnown RBP10.72□□□□□ -0.69
RBFOX1-202ENST00000340209 LRRC14Q15048 493 aa10.72□□□□□ -0.69
RBFOX1-202ENST00000340209 IQSEC1Q6DN90 963 aa10.72□□□□□ -0.69
RBFOX1-202ENST00000340209 NPNTQ6UXI9 565 aa10.72□□□□□ -0.69
RBFOX1-202ENST00000340209 CCDC89Q8N998 374 aa10.72□□□□□ -0.69
RBFOX1-202ENST00000340209 BEST2Q8NFU1 509 aa10.72□□□□□ -0.69
RBFOX1-202ENST00000340209 CLEC4CQ8WTT0 213 aa10.72□□□□□ -0.69
RBFOX1-202ENST00000340209 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.72□□□□□ -0.69
RBFOX1-202ENST00000340209 WDR90Q96KV7 1748 aa10.72□□□□□ -0.69
RBFOX1-202ENST00000340209 CLDN5O00501 218 aa10.72□□□□□ -0.69
RBFOX1-202ENST00000340209 MEFVO15553 781 aaPredicted RBP10.72□□□□□ -0.69
RBFOX1-202ENST00000340209 B4GALT4O60513 344 aa10.72□□□□□ -0.69
RBFOX1-202ENST00000340209 YY1P25490 414 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms