RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 EHMT1Q9H9B1 1298 aa12.58□□□□□ -0.4
CCDC144CP-201ENST00000340196 CNTNAP1P78357 1384 aa12.58□□□□□ -0.4
CCDC144CP-201ENST00000340196 E5RJQ4 531 aa12.58□□□□□ -0.4
CCDC144CP-201ENST00000340196 FAM155BO75949 473 aa12.58□□□□□ -0.4
CCDC144CP-201ENST00000340196 MAP3K6O95382 1288 aa12.58□□□□□ -0.4
CCDC144CP-201ENST00000340196 GCLCP48506 637 aaPredicted RBP12.58□□□□□ -0.4
CCDC144CP-201ENST00000340196 GCNT1Q02742 428 aa12.58□□□□□ -0.4
CCDC144CP-201ENST00000340196 CAV1Q03135 178 aa12.58□□□□□ -0.4
CCDC144CP-201ENST00000340196 PTP4A2Q12974 167 aa12.58□□□□□ -0.4
CCDC144CP-201ENST00000340196 RCN1Q15293 331 aa12.58□□□□□ -0.4
CCDC144CP-201ENST00000340196 RNASEH2BQ5TBB1 312 aaKnown RBP12.58□□□□□ -0.4
CCDC144CP-201ENST00000340196 RNF220Q5VTB9 566 aa12.58□□□□□ -0.4
CCDC144CP-201ENST00000340196 SCARA5Q6ZMJ2 495 aa12.58□□□□□ -0.4
CCDC144CP-201ENST00000340196 TRIM74Q86UV6 250 aa12.58□□□□□ -0.4
CCDC144CP-201ENST00000340196 TRIM73Q86UV7 250 aa12.58□□□□□ -0.4
CCDC144CP-201ENST00000340196 IGDCC3Q8IVU1 814 aa12.58□□□□□ -0.4
CCDC144CP-201ENST00000340196 KATNAL2Q8IYT4 538 aa12.58□□□□□ -0.4
CCDC144CP-201ENST00000340196 RBBP8NLQ8NC74 664 aaPredicted RBP12.58□□□□□ -0.4
CCDC144CP-201ENST00000340196 ZCWPW1Q9H0M4 648 aa12.58□□□□□ -0.4
CCDC144CP-201ENST00000340196 BATF3Q9NR55 127 aa12.58□□□□□ -0.4
CCDC144CP-201ENST00000340196 NMRK1Q9NWW6 199 aa12.58□□□□□ -0.4
CCDC144CP-201ENST00000340196 HEY2Q9UBP5 337 aa12.58□□□□□ -0.4
CCDC144CP-201ENST00000340196 UBIAD1Q9Y5Z9 338 aa12.58□□□□□ -0.4
CCDC144CP-201ENST00000340196 AVILO75366 819 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 RPS12P25398 132 aaKnown RBP12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 MAN1A1P33908 653 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 RFC5P40937 340 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 SKIV2L2P42285 1042 aaKnown RBP12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 SLC1A1P43005 524 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 ZNF280AP59817 542 aaPredicted RBP12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 CCDC15Q0P6D6 951 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 PGM5Q15124 567 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 TAF5Q15542 800 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 SMAD1Q15797 465 aaKnown RBP12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 BBS9Q3SYG4 887 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 SWSAP1Q6NVH7 229 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 SYDE1Q6ZW31 735 aaPredicted RBP12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 KCTD17Q8N5Z5 321 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 ALLCQ8N6M5 410 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 KLHL23Q8NBE8 558 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 DRAXINQ8NBI3 349 aaPredicted RBP12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 ASAP3Q8TDY4 903 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 FNBP1Q96RU3 617 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 PAFAH2Q99487 392 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 TRIM56Q9BRZ2 755 aaKnown RBP12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 AVENQ9NQS1 362 aaPredicted RBP12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 GINM1Q9NU53 330 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 SEPT9Q9UHD8 586 aaPredicted RBP12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 SYNPO2Q9UMS6 1093 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 RIPK3Q9Y572 518 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 WASF2Q9Y6W5 498 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 TMEM63AO94886 807 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 MUTP22033 750 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 MTMR2Q13614 643 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 MTERF2Q49AM1 385 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 ACSBG2Q5FVE4 666 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 RINLQ6ZS11 566 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 ZNF276Q8N554 614 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 EXD1Q8NHP7 514 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 TTC17Q96AE7 1141 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 ZNF668Q96K58 619 aaPredicted RBP12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 FBXL18Q96ME1 805 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 RMDN3Q96TC7 470 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 MECRQ9BV79 373 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 PGAP2Q9UHJ9 254 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 G3BP2Q9UN86 482 aaKnown RBP12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 FZD1Q9UP38 647 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 CHMP2BQ9UQN3 213 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 A6NHS1 94 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 PRPF4O43172 522 aaKnown RBP eCLIP12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 PSTPIP1O43586 416 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 TBC1D12O60347 775 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 GTF2H1P32780 548 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 CUL2Q13617 745 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 WDR44Q5JSH3 913 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 SPOCD1Q6ZMY3 1216 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 C3orf62Q6ZUJ4 267 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 ALYREFQ86V81 257 aaKnown RBP12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 ABRAQ8N0Z2 381 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 AGGF1Q8N302 714 aaeCLIP12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 EMC1Q8N766 993 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 FBXO36Q8NEA4 188 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 FEZF2Q8TBJ5 459 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 VTI1AQ96AJ9 217 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 GRAMD1AQ96CP6 724 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 CLPTM1LQ96KA5 538 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 FAM111AQ96PZ2 611 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 DDX50Q9BQ39 737 aaKnown RBP12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 CYLDQ9NQC7 956 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 DLGAP2Q9P1A6 1054 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 RABGEF1Q9UJ41 708 aa12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 CORO1CQ9ULV4 474 aaPredicted RBP12.57□□□□□ -0.4
CCDC144CP-201ENST00000340196 CCDC195A0A1B0GUA6 201 aa12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 FZD9O00144 591 aa12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 MAGEB2O15479 319 aa12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 CST3P01034 146 aaPredicted RBP12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 ICAM1P05362 532 aa12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 BGNP21810 368 aa12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 LIG4P49917 911 aa12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 MAP3K10Q02779 954 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms