RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 EXO5Q9H790 373 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 KCNK9Q9NPC2 374 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 RAD54BQ9Y620 910 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 PIK3CDO00329 1044 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 CKBP12277 381 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 CMA1P23946 247 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 MARK3P27448 753 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 DNA2P51530 1060 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 VSNL1P62760 191 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 PDIA6Q15084 440 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 PTGES3Q15185 160 aaKnown RBP3.43□□□□□ -1.86
CSMD3-202ENST00000339701 UAP1L1Q3KQV9 507 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 XKR9Q5GH70 373 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 METTL3Q86U44 580 aaKnown RBP3.43□□□□□ -1.86
CSMD3-202ENST00000339701 SCYL3Q8IZE3 742 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 DEFB123Q8N688 67 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 CRELD1Q96HD1 420 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 SUCLG2Q96I99 432 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 SERPINB12Q96P63 405 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 TEX13BQ9BXU2 312 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 PRDM8Q9NQV8 689 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 SETD4Q9NVD3 440 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 SDK1Q7Z5N4 2213 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 A6NJR5 290 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 TEX28O15482 410 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 HUS1O60921 280 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 TADA3O75528 432 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 MPOP05164 745 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 PDHA1P08559 390 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 ATXN8OSP0DMR3 200 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 NQO1P15559 274 aaKnown RBP3.43□□□□□ -1.86
CSMD3-202ENST00000339701 GUCY2CP25092 1073 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 HNMTP50135 292 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 KCNQ4P56696 695 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 GNA13Q14344 377 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 SLFN13Q68D06 897 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 TRAF7Q6Q0C0 670 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 TPH2Q8IWU9 490 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 RASSF5Q8WWW0 418 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 NFKBIZQ9BYH8 718 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 VPS16Q9H269 839 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 RPAP3Q9H6T3 665 aaPredicted RBP3.43□□□□□ -1.86
CSMD3-202ENST00000339701 PRG3Q9Y2Y8 225 aaPredicted RBP3.43□□□□□ -1.86
CSMD3-202ENST00000339701 VSTM5A8MXK1 200 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 KPNA3O00505 521 aaPredicted RBP3.43□□□□□ -1.86
CSMD3-202ENST00000339701 GNGT2O14610 69 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 NVLO15381 856 aaKnown RBP3.43□□□□□ -1.86
CSMD3-202ENST00000339701 TREHO43280 583 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 RHOBTB1O94844 696 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 EEF2P13639 858 aaKnown RBP3.43□□□□□ -1.86
CSMD3-202ENST00000339701 AVPR1AP37288 418 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 ADCY7P51828 1080 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 ELAVL2Q12926 359 aaKnown RBP3.43□□□□□ -1.86
CSMD3-202ENST00000339701 SLC10A5Q5PT55 438 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 FAM102BQ5T8I3 360 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 BICRALQ6AI39 1079 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 TTBK2Q6IQ55 1244 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 OTOP3Q7RTS5 596 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 CDH24Q86UP0 819 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 MICU3Q86XE3 530 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 STAG2Q8N3U4 1231 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 CD99L2Q8TCZ2 262 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 AGBL1Q96MI9 1066 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 NANSQ9NR45 359 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.43□□□□□ -1.86
CSMD3-202ENST00000339701 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.43□□□□□ -1.86
CSMD3-202ENST00000339701 STAM2O75886 525 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 AKAP5P24588 427 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 TRPC1P48995 793 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 RAD23AP54725 363 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 OXCT1P55809 520 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 RAB2AP61019 212 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 IL18R1Q13478 541 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 GRIK4Q16099 956 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 C10orf62Q5T681 223 aaPredicted RBP3.43□□□□□ -1.86
CSMD3-202ENST00000339701 ZNF677Q86XU0 584 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 COL23A1Q86Y22 540 aaPredicted RBP3.43□□□□□ -1.86
CSMD3-202ENST00000339701 FAM178BQ8IXR5 827 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 LEMD2Q8NC56 503 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 GRPEL2Q8TAA5 225 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 SLC20A1Q8WUM9 679 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 L3MBTL3Q96JM7 780 aaPredicted RBP3.43□□□□□ -1.86
CSMD3-202ENST00000339701 RIBC2Q9H4K1 309 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 ZNF556Q9HAH1 456 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 ELOVL2Q9NXB9 296 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 ZMYM5Q9UJ78 669 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 PACSIN3Q9UKS6 424 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 SNX9Q9Y5X1 595 aa3.43□□□□□ -1.86
CSMD3-202ENST00000339701 TAF1P21675 1872 aa3.42□□□□□ -1.86
CSMD3-202ENST00000339701 C2CD2LO14523 706 aa3.42□□□□□ -1.86
CSMD3-202ENST00000339701 CTNND1O60716 968 aaKnown RBP3.42□□□□□ -1.86
CSMD3-202ENST00000339701 FKBP6O75344 327 aa3.42□□□□□ -1.86
CSMD3-202ENST00000339701 S100GP29377 79 aa3.42□□□□□ -1.86
CSMD3-202ENST00000339701 TMED10P49755 219 aaKnown RBP3.42□□□□□ -1.86
CSMD3-202ENST00000339701 PPIDQ08752 370 aaKnown RBP3.42□□□□□ -1.86
CSMD3-202ENST00000339701 LRRC74AQ0VAA2 488 aa3.42□□□□□ -1.86
CSMD3-202ENST00000339701 TRIM28Q13263 835 aaKnown RBP3.42□□□□□ -1.86
CSMD3-202ENST00000339701 RABL6Q3YEC7 729 aaPredicted RBP3.42□□□□□ -1.86
CSMD3-202ENST00000339701 NAALADL2Q58DX5 795 aa3.42□□□□□ -1.86
CSMD3-202ENST00000339701 ZNF438Q7Z4V0 828 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms