RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 OR6B3Q8NGW1 331 aa13.73□□□□□ -0.21
SRSF3-201ENST00000339436 C2orf15Q8WU43 125 aaKnown RBP13.73□□□□□ -0.21
SRSF3-201ENST00000339436 BPIFA3Q9BQP9 254 aa13.73□□□□□ -0.21
SRSF3-201ENST00000339436 PRKD2Q9BZL6 878 aa13.73□□□□□ -0.21
SRSF3-201ENST00000339436 CYP3A43Q9HB55 503 aa13.73□□□□□ -0.21
SRSF3-201ENST00000339436 TMLHEQ9NVH6 421 aa13.73□□□□□ -0.21
SRSF3-201ENST00000339436 HSFX1Q9UBD0 423 aa13.73□□□□□ -0.21
SRSF3-201ENST00000339436 HMGXB4Q9UGU5 601 aa13.73□□□□□ -0.21
SRSF3-201ENST00000339436 FAM50BQ9Y247 325 aa13.73□□□□□ -0.21
SRSF3-201ENST00000339436 YIPF1Q9Y548 306 aa13.73□□□□□ -0.21
SRSF3-201ENST00000339436 ANAPC1Q9H1A4 1944 aa13.72□□□□□ -0.21
SRSF3-201ENST00000339436 CCDC195A0A1B0GUA6 201 aa13.72□□□□□ -0.21
SRSF3-201ENST00000339436 WEE2P0C1S8 567 aa13.72□□□□□ -0.21
SRSF3-201ENST00000339436 DUSP4Q13115 394 aa13.72□□□□□ -0.21
SRSF3-201ENST00000339436 NCAPHQ15003 741 aa13.72□□□□□ -0.21
SRSF3-201ENST00000339436 MIIPQ5JXC2 388 aa13.72□□□□□ -0.21
SRSF3-201ENST00000339436 FAM171BQ6P995 826 aa13.72□□□□□ -0.21
SRSF3-201ENST00000339436 CYP26C1Q6V0L0 522 aa13.72□□□□□ -0.21
SRSF3-201ENST00000339436 AOPEPQ8N6M6 819 aa13.72□□□□□ -0.21
SRSF3-201ENST00000339436 LMO3Q8TAP4 145 aa13.72□□□□□ -0.21
SRSF3-201ENST00000339436 SPPL2BQ8TCT7 592 aa13.72□□□□□ -0.21
SRSF3-201ENST00000339436 SMG7Q92540 1137 aaKnown RBP13.72□□□□□ -0.21
SRSF3-201ENST00000339436 NECTIN4Q96NY8 510 aa13.72□□□□□ -0.21
SRSF3-201ENST00000339436 ARID3AQ99856 593 aa13.72□□□□□ -0.21
SRSF3-201ENST00000339436 TUBGCP2Q9BSJ2 902 aa13.72□□□□□ -0.21
SRSF3-201ENST00000339436 DPEP3Q9H4B8 488 aa13.72□□□□□ -0.21
SRSF3-201ENST00000339436 ABCB6Q9NP58 842 aa13.72□□□□□ -0.21
SRSF3-201ENST00000339436 CRTAC1Q9NQ79 661 aa13.72□□□□□ -0.21
SRSF3-201ENST00000339436 FANCLQ9NW38 375 aa13.72□□□□□ -0.21
SRSF3-201ENST00000339436 ABI2Q9NYB9 513 aaPredicted RBP13.72□□□□□ -0.21
SRSF3-201ENST00000339436 GCNT4Q9P109 453 aa13.72□□□□□ -0.21
SRSF3-201ENST00000339436 MYBPHLA2RUH7 354 aa13.71□□□□□ -0.21
SRSF3-201ENST00000339436 GTPBP10A4D1E9 387 aaKnown RBP13.71□□□□□ -0.21
SRSF3-201ENST00000339436 A8MXQ7 604 aa13.71□□□□□ -0.21
SRSF3-201ENST00000339436 CCL16O15467 120 aa13.71□□□□□ -0.21
SRSF3-201ENST00000339436 ATP2C2O75185 946 aa13.71□□□□□ -0.21
SRSF3-201ENST00000339436 LRG1P02750 347 aa13.71□□□□□ -0.21
SRSF3-201ENST00000339436 PDGFRBP09619 1106 aa13.71□□□□□ -0.21
SRSF3-201ENST00000339436 BMP1P13497 986 aa13.71□□□□□ -0.21
SRSF3-201ENST00000339436 PRKCSHP14314 528 aaPredicted RBP13.71□□□□□ -0.21
SRSF3-201ENST00000339436 MTHFRP42898 656 aa13.71□□□□□ -0.21
SRSF3-201ENST00000339436 MAPRE1Q15691 268 aaKnown RBP13.71□□□□□ -0.21
SRSF3-201ENST00000339436 TJAP1Q5JTD0 557 aa13.71□□□□□ -0.21
SRSF3-201ENST00000339436 UNC93AQ86WB7 457 aa13.71□□□□□ -0.21
SRSF3-201ENST00000339436 B3GALNT2Q8NCR0 500 aa13.71□□□□□ -0.21
SRSF3-201ENST00000339436 TATDN2Q93075 761 aa13.71□□□□□ -0.21
SRSF3-201ENST00000339436 MYLPFQ96A32 169 aa13.71□□□□□ -0.21
SRSF3-201ENST00000339436 RIPOR3Q96MK2 946 aa13.71□□□□□ -0.21
SRSF3-201ENST00000339436 NT5C1BQ96P26 610 aa13.71□□□□□ -0.21
SRSF3-201ENST00000339436 HSD3B7Q9H2F3 369 aa13.71□□□□□ -0.21
SRSF3-201ENST00000339436 FAM124BQ9H5Z6 455 aaPredicted RBP13.71□□□□□ -0.21
SRSF3-201ENST00000339436 GTF3C4Q9UKN8 822 aa13.71□□□□□ -0.21
SRSF3-201ENST00000339436 PCDHB5Q9Y5E4 795 aa13.71□□□□□ -0.21
SRSF3-201ENST00000339436 XYLBO75191 536 aa13.7□□□□□ -0.22
SRSF3-201ENST00000339436 CILPO75339 1184 aa13.7□□□□□ -0.22
SRSF3-201ENST00000339436 ZNF18P17022 549 aa13.7□□□□□ -0.22
SRSF3-201ENST00000339436 CD58P19256 250 aa13.7□□□□□ -0.22
SRSF3-201ENST00000339436 ZNF165P49910 485 aa13.7□□□□□ -0.22
SRSF3-201ENST00000339436 CDR1P51861 262 aa13.7□□□□□ -0.22
SRSF3-201ENST00000339436 NDST1P52848 882 aa13.7□□□□□ -0.22
SRSF3-201ENST00000339436 TWF1Q12792 350 aa13.7□□□□□ -0.22
SRSF3-201ENST00000339436 CUL2Q13617 745 aa13.7□□□□□ -0.22
SRSF3-201ENST00000339436 CFAP221Q4G0U5 840 aa13.7□□□□□ -0.22
SRSF3-201ENST00000339436 VWA3BQ502W6 1294 aa13.7□□□□□ -0.22
SRSF3-201ENST00000339436 ATAT1Q5SQI0 421 aa13.7□□□□□ -0.22
SRSF3-201ENST00000339436 DHX40Q8IX18 779 aaKnown RBP13.7□□□□□ -0.22
SRSF3-201ENST00000339436 MYCBPAPQ8TBZ2 947 aa13.7□□□□□ -0.22
SRSF3-201ENST00000339436 PCED1BQ96HM7 432 aa13.7□□□□□ -0.22
SRSF3-201ENST00000339436 FUBP3Q96I24 572 aaKnown RBP eCLIP13.7□□□□□ -0.22
SRSF3-201ENST00000339436 TNIP3Q96KP6 325 aa13.7□□□□□ -0.22
SRSF3-201ENST00000339436 SEPT5Q99719 369 aaPredicted RBP13.7□□□□□ -0.22
SRSF3-201ENST00000339436 INTS2Q9H0H0 1204 aaKnown RBP13.7□□□□□ -0.22
SRSF3-201ENST00000339436 NDST4Q9H3R1 872 aa13.7□□□□□ -0.22
SRSF3-201ENST00000339436 POMKQ9H5K3 350 aa13.7□□□□□ -0.22
SRSF3-201ENST00000339436 NUP210Q8TEM1 1887 aaPredicted RBP13.7□□□□□ -0.22
SRSF3-201ENST00000339436 HAPLN1P10915 354 aaPredicted RBP13.69□□□□□ -0.22
SRSF3-201ENST00000339436 ATF6P18850 670 aa13.69□□□□□ -0.22
SRSF3-201ENST00000339436 TBXAS1P24557 533 aaPredicted RBP13.69□□□□□ -0.22
SRSF3-201ENST00000339436 LRMPQ12912 555 aa13.69□□□□□ -0.22
SRSF3-201ENST00000339436 PLD1Q13393 1074 aa13.69□□□□□ -0.22
SRSF3-201ENST00000339436 KRT31Q15323 416 aa13.69□□□□□ -0.22
SRSF3-201ENST00000339436 MGAT5BQ3V5L5 792 aa13.69□□□□□ -0.22
SRSF3-201ENST00000339436 MDH1BQ5I0G3 518 aa13.69□□□□□ -0.22
SRSF3-201ENST00000339436 TRIM65Q6PJ69 517 aa13.69□□□□□ -0.22
SRSF3-201ENST00000339436 C4orf50Q6ZRC1 276 aa13.69□□□□□ -0.22
SRSF3-201ENST00000339436 SPATA2LQ8IUW3 424 aaPredicted RBP13.69□□□□□ -0.22
SRSF3-201ENST00000339436 TTC39CQ8N584 583 aa13.69□□□□□ -0.22
SRSF3-201ENST00000339436 TWNKQ96RR1 684 aa13.69□□□□□ -0.22
SRSF3-201ENST00000339436 CRACR2AQ9BSW2 395 aa13.69□□□□□ -0.22
SRSF3-201ENST00000339436 PIDD1Q9HB75 910 aa13.69□□□□□ -0.22
SRSF3-201ENST00000339436 CISHQ9NSE2 258 aa13.69□□□□□ -0.22
SRSF3-201ENST00000339436 TAB2Q9NYJ8 693 aa13.69□□□□□ -0.22
SRSF3-201ENST00000339436 SLC27A5Q9Y2P5 690 aa13.69□□□□□ -0.22
SRSF3-201ENST00000339436 CLUHO75153 1309 aa13.69□□□□□ -0.22
SRSF3-201ENST00000339436 SOAT2O75908 522 aa13.69□□□□□ -0.22
SRSF3-201ENST00000339436 PTPN1P18031 435 aaKnown RBP13.69□□□□□ -0.22
SRSF3-201ENST00000339436 TUFMP49411 452 aaKnown RBP13.69□□□□□ -0.22
SRSF3-201ENST00000339436 GCNT1Q02742 428 aa13.69□□□□□ -0.22
SRSF3-201ENST00000339436 ORC1Q13415 861 aa13.69□□□□□ -0.22
SRSF3-201ENST00000339436 EXOC3L4Q17RC7 722 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms