RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 CCDC105Q8IYK2 499 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 VRTNQ9H8Y1 702 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 MRPL47Q9HD33 250 aaKnown RBP7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 ADAM21Q9UKJ8 722 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 TSPAN16Q9UKR8 245 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 ITGA11Q9UKX5 1188 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 BARX2Q9UMQ3 279 aaPredicted RBP7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 ST3GAL5Q9UNP4 418 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 CDY2AQ9Y6F7 541 aa7.83□□□□□ -1.16
SRFBP1-201ENST00000339397 PTGESO14684 152 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 FSCN2O14926 492 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 TP73O15350 636 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 RNF40O75150 1001 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 PHF2O75151 1096 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 ATP2C2O75185 946 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 KRT3P12035 628 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 PRKAR2AP13861 404 aaKnown RBP7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 TNFRSF8P28908 595 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 ATICP31939 592 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 COILP38432 576 aaPredicted RBP7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 VPS41P49754 854 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 PLTPP55058 493 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 GJA9P57773 515 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 DCAF4L1Q3SXM0 396 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 KCTD16Q68DU8 428 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 DUPD1Q68J44 220 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 EMBQ6PCB8 327 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 MFSD7Q6UXD7 560 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 MAATS1Q7Z4T9 603 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 TTC30AQ86WT1 665 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 SCUBE3Q8IX30 993 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 CCDC26Q8TAB7 109 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 FBXO25Q8TCJ0 367 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 CAVIN3Q969G5 261 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 HAUS1Q96CS2 278 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 PAAF1Q9BRP4 392 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 ERP44Q9BS26 406 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 SLITRK6Q9H5Y7 841 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 C10orf88Q9H8K7 445 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 METTL5Q9NRN9 209 aaKnown RBP7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 MIOSQ9NXC5 875 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 PCSK1NQ9UHG2 260 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 GTF2IRD1Q9UHL9 959 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 UTP11Q9Y3A2 253 aaKnown RBP7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 CDH23Q9H251 3354 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 ZNF236Q9UL36 1845 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 E5RJQ4 531 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 ADAMTS4O75173 837 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 LSM8O95777 96 aaKnown RBP7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 CD48P09326 243 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 RARBP10826 455 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 CRYBB1P53674 252 aaPredicted RBP7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 YARSP54577 528 aaKnown RBP7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 FCGRTP55899 365 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 PAK2Q13177 524 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 PDCLQ13371 301 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 SGO2Q562F6 1265 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 B4GALNT4Q76KP1 1039 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 IQCKQ8N0W5 287 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 SH2D3CQ8N5H7 860 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 GLIS1Q8NBF1 620 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 C3orf20Q8ND61 904 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 GSTCDQ8NEC7 633 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 OR6B3Q8NGW1 331 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 SEC14L1Q92503 715 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 SPOCK2Q92563 424 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 TRIM11Q96F44 468 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 PWWP2AQ96N64 755 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 MAGEB5Q9BZ81 275 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 LHX5Q9H2C1 402 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 SYNCQ9H7C4 482 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 ZWILCHQ9H900 591 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 TRMT13Q9NUP7 481 aaKnown RBP7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 CNTN3Q9P232 1028 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 Q9Y3F1 56 aa7.82□□□□□ -1.16
SRFBP1-201ENST00000339397 GOLGA6L10A0A0M3HER8 536 aa7.81□□□□□ -1.16
SRFBP1-201ENST00000339397 SEPT4O43236 478 aa7.81□□□□□ -1.16
SRFBP1-201ENST00000339397 CALB1P05937 261 aa7.81□□□□□ -1.16
SRFBP1-201ENST00000339397 PAEPP09466 180 aa7.81□□□□□ -1.16
SRFBP1-201ENST00000339397 CCDC130P13994 396 aa7.81□□□□□ -1.16
SRFBP1-201ENST00000339397 ATF7P17544 494 aaPredicted RBP7.81□□□□□ -1.16
SRFBP1-201ENST00000339397 YWHAEP62258 255 aaKnown RBP7.81□□□□□ -1.16
SRFBP1-201ENST00000339397 PDE4CQ08493 712 aa7.81□□□□□ -1.16
SRFBP1-201ENST00000339397 INCA1Q0VD86 236 aa7.81□□□□□ -1.16
SRFBP1-201ENST00000339397 KLF1Q13351 362 aaPredicted RBP7.81□□□□□ -1.16
SRFBP1-201ENST00000339397 CNGA2Q16280 664 aa7.81□□□□□ -1.16
SRFBP1-201ENST00000339397 C15orf59Q2T9L4 293 aaPredicted RBP7.81□□□□□ -1.16
SRFBP1-201ENST00000339397 DNAJC21Q5F1R6 531 aaKnown RBP7.81□□□□□ -1.16
SRFBP1-201ENST00000339397 MFSD14CQ5VZR4 134 aa7.81□□□□□ -1.16
SRFBP1-201ENST00000339397 ZDHHC24Q6UX98 284 aa7.81□□□□□ -1.16
SRFBP1-201ENST00000339397 RHOT1Q8IXI2 618 aa7.81□□□□□ -1.16
SRFBP1-201ENST00000339397 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.81□□□□□ -1.16
SRFBP1-201ENST00000339397 CLEC4CQ8WTT0 213 aa7.81□□□□□ -1.16
SRFBP1-201ENST00000339397 KBTBD7Q8WVZ9 684 aa7.81□□□□□ -1.16
SRFBP1-201ENST00000339397 NDRG1Q92597 394 aaKnown RBP7.81□□□□□ -1.16
SRFBP1-201ENST00000339397 NAP1L3Q99457 506 aaPredicted RBP7.81□□□□□ -1.16
SRFBP1-201ENST00000339397 NT5C1AQ9BXI3 368 aa7.81□□□□□ -1.16
SRFBP1-201ENST00000339397 VIPAS39Q9H9C1 493 aa7.81□□□□□ -1.16
SRFBP1-201ENST00000339397 XPNPEP3Q9NQH7 507 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms