RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 ACRP10323 421 aa15.64■□□□□ 0.09
CDK5RAP3-201ENST00000338399 ODC1P11926 461 aa15.64■□□□□ 0.09
CDK5RAP3-201ENST00000338399 ACAT1P24752 427 aaKnown RBP15.64■□□□□ 0.09
CDK5RAP3-201ENST00000338399 PTP4A2Q12974 167 aa15.64■□□□□ 0.09
CDK5RAP3-201ENST00000338399 STILQ15468 1287 aa15.64■□□□□ 0.09
CDK5RAP3-201ENST00000338399 GOLGA7BQ2TAP0 167 aa15.64■□□□□ 0.09
CDK5RAP3-201ENST00000338399 LLGL2Q6P1M3 1020 aa15.64■□□□□ 0.09
CDK5RAP3-201ENST00000338399 RSPH1Q8WYR4 309 aa15.64■□□□□ 0.09
CDK5RAP3-201ENST00000338399 TRIM11Q96F44 468 aa15.64■□□□□ 0.09
CDK5RAP3-201ENST00000338399 TNIP3Q96KP6 325 aa15.64■□□□□ 0.09
CDK5RAP3-201ENST00000338399 DNAI2Q9GZS0 605 aa15.64■□□□□ 0.09
CDK5RAP3-201ENST00000338399 DDX43Q9NXZ2 648 aaKnown RBP15.64■□□□□ 0.09
CDK5RAP3-201ENST00000338399 HCSTQ9UBK5 93 aa15.64■□□□□ 0.09
CDK5RAP3-201ENST00000338399 PRG3Q9Y2Y8 225 aaPredicted RBP15.64■□□□□ 0.09
CDK5RAP3-201ENST00000338399 ABHD14A-ACY1A0A1B0GW23 586 aa15.63■□□□□ 0.09
CDK5RAP3-201ENST00000338399 M0QZQ0 153 aa15.63■□□□□ 0.09
CDK5RAP3-201ENST00000338399 ATP2C2O75185 946 aa15.63■□□□□ 0.09
CDK5RAP3-201ENST00000338399 MYBL1P10243 752 aa15.63■□□□□ 0.09
CDK5RAP3-201ENST00000338399 MMP8P22894 467 aa15.63■□□□□ 0.09
CDK5RAP3-201ENST00000338399 PAX3P23760 479 aa15.63■□□□□ 0.09
CDK5RAP3-201ENST00000338399 RRM1P23921 792 aa15.63■□□□□ 0.09
CDK5RAP3-201ENST00000338399 LHX1P48742 406 aa15.63■□□□□ 0.09
CDK5RAP3-201ENST00000338399 PSMC1P62191 440 aaKnown RBP15.63■□□□□ 0.09
CDK5RAP3-201ENST00000338399 C1QBPQ07021 282 aaKnown RBP15.63■□□□□ 0.09
CDK5RAP3-201ENST00000338399 ERICH1Q86X53 443 aa15.63■□□□□ 0.09
CDK5RAP3-201ENST00000338399 VCPIP1Q96JH7 1222 aa15.63■□□□□ 0.09
CDK5RAP3-201ENST00000338399 NUP85Q9BW27 656 aa15.63■□□□□ 0.09
CDK5RAP3-201ENST00000338399 GOLPH3Q9H4A6 298 aa15.63■□□□□ 0.09
CDK5RAP3-201ENST00000338399 JRKLQ9Y4A0 524 aa15.63■□□□□ 0.09
CDK5RAP3-201ENST00000338399 FTCDO95954 541 aa15.63■□□□□ 0.09
CDK5RAP3-201ENST00000338399 CCDC130P13994 396 aa15.63■□□□□ 0.09
CDK5RAP3-201ENST00000338399 GPD2P43304 727 aa15.63■□□□□ 0.09
CDK5RAP3-201ENST00000338399 TCEAL1Q15170 157 aa15.63■□□□□ 0.09
CDK5RAP3-201ENST00000338399 LIN9Q5TKA1 542 aa15.63■□□□□ 0.09
CDK5RAP3-201ENST00000338399 METTL23Q86XA0 190 aa15.63■□□□□ 0.09
CDK5RAP3-201ENST00000338399 B3GALNT2Q8NCR0 500 aa15.63■□□□□ 0.09
CDK5RAP3-201ENST00000338399 ZNF564Q8TBZ8 553 aaPredicted RBP15.63■□□□□ 0.09
CDK5RAP3-201ENST00000338399 SUSD3Q96L08 255 aa15.63■□□□□ 0.09
CDK5RAP3-201ENST00000338399 MRPL9Q9BYD2 267 aaKnown RBP15.63■□□□□ 0.09
CDK5RAP3-201ENST00000338399 AVENQ9NQS1 362 aaPredicted RBP15.63■□□□□ 0.09
CDK5RAP3-201ENST00000338399 TMEM189-UBE2V1I3L0A0 370 aa15.62■□□□□ 0.09
CDK5RAP3-201ENST00000338399 NRP1O14786 923 aa15.62■□□□□ 0.09
CDK5RAP3-201ENST00000338399 BUB1BO60566 1050 aaPredicted RBP15.62■□□□□ 0.09
CDK5RAP3-201ENST00000338399 CYP11A1P05108 521 aa15.62■□□□□ 0.09
CDK5RAP3-201ENST00000338399 CALB1P05937 261 aa15.62■□□□□ 0.09
CDK5RAP3-201ENST00000338399 PTPN1P18031 435 aaKnown RBP15.62■□□□□ 0.09
CDK5RAP3-201ENST00000338399 ADORA2BP29275 332 aa15.62■□□□□ 0.09
CDK5RAP3-201ENST00000338399 HADHBP55084 474 aaKnown RBP15.62■□□□□ 0.09
CDK5RAP3-201ENST00000338399 CCDC142Q17RM4 750 aa15.62■□□□□ 0.09
CDK5RAP3-201ENST00000338399 PTPN20Q4JDL3 420 aa15.62■□□□□ 0.09
CDK5RAP3-201ENST00000338399 KIAA0319Q5VV43 1072 aa15.62■□□□□ 0.09
CDK5RAP3-201ENST00000338399 ARHGAP17Q68EM7 881 aa15.62■□□□□ 0.09
CDK5RAP3-201ENST00000338399 DAAM2Q86T65 1068 aa15.62■□□□□ 0.09
CDK5RAP3-201ENST00000338399 TTC30AQ86WT1 665 aa15.62■□□□□ 0.09
CDK5RAP3-201ENST00000338399 LRRC57Q8N9N7 239 aa15.62■□□□□ 0.09
CDK5RAP3-201ENST00000338399 UVRAGQ9P2Y5 699 aa15.62■□□□□ 0.09
CDK5RAP3-201ENST00000338399 HESX1Q9UBX0 185 aa15.62■□□□□ 0.09
CDK5RAP3-201ENST00000338399 NCK2O43639 380 aa15.61■□□□□ 0.09
CDK5RAP3-201ENST00000338399 TADA2AO75478 443 aa15.61■□□□□ 0.09
CDK5RAP3-201ENST00000338399 MTA2O94776 668 aa15.61■□□□□ 0.09
CDK5RAP3-201ENST00000338399 ALDH2P05091 517 aa15.61■□□□□ 0.09
CDK5RAP3-201ENST00000338399 PFKMP08237 780 aa15.61■□□□□ 0.09
CDK5RAP3-201ENST00000338399 PTPROQ16827 1216 aa15.61■□□□□ 0.09
CDK5RAP3-201ENST00000338399 CPXM1Q96SM3 734 aa15.61■□□□□ 0.09
CDK5RAP3-201ENST00000338399 SYT15Q9BQS2 421 aa15.61■□□□□ 0.09
CDK5RAP3-201ENST00000338399 TJP2Q9UDY2 1190 aa15.61■□□□□ 0.09
CDK5RAP3-201ENST00000338399 PRKAG2Q9UGJ0 569 aa15.61■□□□□ 0.09
CDK5RAP3-201ENST00000338399 DSEQ9UL01 958 aa15.61■□□□□ 0.09
CDK5RAP3-201ENST00000338399 DGKIO75912 1065 aa15.61■□□□□ 0.09
CDK5RAP3-201ENST00000338399 AMHP03971 560 aa15.61■□□□□ 0.09
CDK5RAP3-201ENST00000338399 SLC11A1P49279 550 aa15.61■□□□□ 0.09
CDK5RAP3-201ENST00000338399 CDR1P51861 262 aa15.61■□□□□ 0.09
CDK5RAP3-201ENST00000338399 DEFB103AP81534 67 aa15.61■□□□□ 0.09
CDK5RAP3-201ENST00000338399 PDCLQ13371 301 aa15.61■□□□□ 0.09
CDK5RAP3-201ENST00000338399 PKDCCQ504Y2 493 aa15.61■□□□□ 0.09
CDK5RAP3-201ENST00000338399 MDH1BQ5I0G3 518 aa15.61■□□□□ 0.09
CDK5RAP3-201ENST00000338399 CYP4A22Q5TCH4 519 aa15.61■□□□□ 0.09
CDK5RAP3-201ENST00000338399 PAPD7Q5XG87 772 aaKnown RBP15.61■□□□□ 0.09
CDK5RAP3-201ENST00000338399 FAM117BQ6P1L5 589 aa15.61■□□□□ 0.09
CDK5RAP3-201ENST00000338399 TMCO2Q7Z6W1 182 aaPredicted RBP15.61■□□□□ 0.09
CDK5RAP3-201ENST00000338399 LRRC43Q8N309 656 aa15.61■□□□□ 0.09
CDK5RAP3-201ENST00000338399 SLC2A14Q8TDB8 520 aa15.61■□□□□ 0.09
CDK5RAP3-201ENST00000338399 TOP1MTQ969P6 601 aa15.61■□□□□ 0.09
CDK5RAP3-201ENST00000338399 BTBD6Q96KE9 485 aa15.61■□□□□ 0.09
CDK5RAP3-201ENST00000338399 RTP3Q9BQQ7 232 aa15.61■□□□□ 0.09
CDK5RAP3-201ENST00000338399 IL23AQ9NPF7 189 aa15.61■□□□□ 0.09
CDK5RAP3-201ENST00000338399 CRTAC1Q9NQ79 661 aa15.61■□□□□ 0.09
CDK5RAP3-201ENST00000338399 PCDHB8Q9UN66 801 aa15.61■□□□□ 0.09
CDK5RAP3-201ENST00000338399 PACSIN2Q9UNF0 486 aaPredicted RBP15.61■□□□□ 0.09
CDK5RAP3-201ENST00000338399 FAN1Q9Y2M0 1017 aa15.61■□□□□ 0.09
CDK5RAP3-201ENST00000338399 ARHGEF37A1IGU5 675 aa15.6■□□□□ 0.09
CDK5RAP3-201ENST00000338399 TMEM110-MUSTN1A8MSY1 372 aa15.6■□□□□ 0.09
CDK5RAP3-201ENST00000338399 NT5C1B-RDH14C9J2C7 533 aa15.6■□□□□ 0.09
CDK5RAP3-201ENST00000338399 TULP2O00295 520 aa15.6■□□□□ 0.09
CDK5RAP3-201ENST00000338399 RIOK3O14730 519 aaKnown RBP15.6■□□□□ 0.09
CDK5RAP3-201ENST00000338399 PCSK1P29120 753 aa15.6■□□□□ 0.09
CDK5RAP3-201ENST00000338399 TKTP29401 623 aaKnown RBP15.6■□□□□ 0.09
CDK5RAP3-201ENST00000338399 WDR5P61964 334 aaKnown RBP15.6■□□□□ 0.09
CDK5RAP3-201ENST00000338399 AMPD2Q01433 879 aa15.6■□□□□ 0.09
CDK5RAP3-201ENST00000338399 MEI1Q5TIA1 1274 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms