RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 MAGEB2O15479 319 aa13.3□□□□□ -0.28
LIMK1-201ENST00000336180 GAS2O43903 313 aaKnown RBP13.3□□□□□ -0.28
LIMK1-201ENST00000336180 RECQL4O94761 1208 aa13.3□□□□□ -0.28
LIMK1-201ENST00000336180 MTA2O94776 668 aa13.3□□□□□ -0.28
LIMK1-201ENST00000336180 ECEL1O95672 775 aa13.3□□□□□ -0.28
LIMK1-201ENST00000336180 ADORA2BP29275 332 aa13.3□□□□□ -0.28
LIMK1-201ENST00000336180 PTPN11Q06124 597 aaPredicted RBP13.3□□□□□ -0.28
LIMK1-201ENST00000336180 CUL1Q13616 776 aa13.3□□□□□ -0.28
LIMK1-201ENST00000336180 SLC29A2Q14542 456 aa13.3□□□□□ -0.28
LIMK1-201ENST00000336180 MFSD10Q14728 455 aa13.3□□□□□ -0.28
LIMK1-201ENST00000336180 PLEKHA7Q6IQ23 1121 aa13.3□□□□□ -0.28
LIMK1-201ENST00000336180 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.3□□□□□ -0.28
LIMK1-201ENST00000336180 EXOC4Q96A65 974 aa13.3□□□□□ -0.28
LIMK1-201ENST00000336180 ZDHHC18Q9NUE0 388 aa13.3□□□□□ -0.28
LIMK1-201ENST00000336180 BANF1O75531 89 aa13.3□□□□□ -0.28
LIMK1-201ENST00000336180 HSPA9P38646 679 aaKnown RBP13.3□□□□□ -0.28
LIMK1-201ENST00000336180 ADCY8P40145 1251 aa13.3□□□□□ -0.28
LIMK1-201ENST00000336180 SEC24CP53992 1094 aa13.3□□□□□ -0.28
LIMK1-201ENST00000336180 MAP2K5Q13163 448 aa13.3□□□□□ -0.28
LIMK1-201ENST00000336180 ZSCAN26Q16670 478 aa13.3□□□□□ -0.28
LIMK1-201ENST00000336180 PAN2Q504Q3 1202 aaKnown RBP13.3□□□□□ -0.28
LIMK1-201ENST00000336180 FAM102AQ5T9C2 384 aaPredicted RBP13.3□□□□□ -0.28
LIMK1-201ENST00000336180 OR6B2Q6IFH4 312 aa13.3□□□□□ -0.28
LIMK1-201ENST00000336180 SCYL2Q6P3W7 929 aa13.3□□□□□ -0.28
LIMK1-201ENST00000336180 LINC01465Q8N7H1 131 aa13.3□□□□□ -0.28
LIMK1-201ENST00000336180 OR6B3Q8NGW1 331 aa13.3□□□□□ -0.28
LIMK1-201ENST00000336180 RAB17Q9H0T7 212 aa13.3□□□□□ -0.28
LIMK1-201ENST00000336180 DNPEPQ9ULA0 475 aa13.3□□□□□ -0.28
LIMK1-201ENST00000336180 ABT1Q9ULW3 272 aaKnown RBP13.3□□□□□ -0.28
LIMK1-201ENST00000336180 PLXNB2O15031 1838 aa13.29□□□□□ -0.28
LIMK1-201ENST00000336180 TRIP11Q15643 1979 aa13.29□□□□□ -0.28
LIMK1-201ENST00000336180 SYNJ2BP-COX16A0A087WUM0 186 aa13.29□□□□□ -0.28
LIMK1-201ENST00000336180 TMEM191CA6NGB0 347 aa13.29□□□□□ -0.28
LIMK1-201ENST00000336180 ASAP2O43150 1006 aa13.29□□□□□ -0.28
LIMK1-201ENST00000336180 KRT3P12035 628 aa13.29□□□□□ -0.28
LIMK1-201ENST00000336180 ACAT1P24752 427 aaKnown RBP13.29□□□□□ -0.28
LIMK1-201ENST00000336180 TNFRSF8P28908 595 aa13.29□□□□□ -0.28
LIMK1-201ENST00000336180 CHRNA3P32297 505 aa13.29□□□□□ -0.28
LIMK1-201ENST00000336180 MMRN1Q13201 1228 aa13.29□□□□□ -0.28
LIMK1-201ENST00000336180 CRHR2Q13324 411 aa13.29□□□□□ -0.28
LIMK1-201ENST00000336180 LRRC31Q6UY01 552 aa13.29□□□□□ -0.28
LIMK1-201ENST00000336180 CTU1Q7Z7A3 348 aaKnown RBP13.29□□□□□ -0.28
LIMK1-201ENST00000336180 ZNF677Q86XU0 584 aa13.29□□□□□ -0.28
LIMK1-201ENST00000336180 PHF13Q86YI8 300 aaPredicted RBP13.29□□□□□ -0.28
LIMK1-201ENST00000336180 RASAL3Q86YV0 1011 aa13.29□□□□□ -0.28
LIMK1-201ENST00000336180 RHOT1Q8IXI2 618 aa13.29□□□□□ -0.28
LIMK1-201ENST00000336180 EPS8L3Q8TE67 593 aaKnown RBP13.29□□□□□ -0.28
LIMK1-201ENST00000336180 CLEC4CQ8WTT0 213 aa13.29□□□□□ -0.28
LIMK1-201ENST00000336180 LPPQ93052 612 aa13.29□□□□□ -0.28
LIMK1-201ENST00000336180 COX16Q9P0S2 106 aa13.29□□□□□ -0.28
LIMK1-201ENST00000336180 TIMM13Q9Y5L4 95 aaPredicted RBP13.29□□□□□ -0.28
LIMK1-201ENST00000336180 F5H423 210 aaPredicted RBP13.29□□□□□ -0.28
LIMK1-201ENST00000336180 OPA1O60313 960 aa13.29□□□□□ -0.28
LIMK1-201ENST00000336180 CAND2O75155 1236 aa13.29□□□□□ -0.28
LIMK1-201ENST00000336180 LMO2P25791 158 aa13.29□□□□□ -0.28
LIMK1-201ENST00000336180 ABCD1P33897 745 aa13.29□□□□□ -0.28
LIMK1-201ENST00000336180 ATXN1P54253 815 aaKnown RBP13.29□□□□□ -0.28
LIMK1-201ENST00000336180 YARSP54577 528 aaKnown RBP13.29□□□□□ -0.28
LIMK1-201ENST00000336180 CAP1Q01518 475 aa13.29□□□□□ -0.28
LIMK1-201ENST00000336180 SCUBE3Q8IX30 993 aa13.29□□□□□ -0.28
LIMK1-201ENST00000336180 ARFGAP1Q8N6T3 406 aa13.29□□□□□ -0.28
LIMK1-201ENST00000336180 TMEM176AQ96HP8 235 aa13.29□□□□□ -0.28
LIMK1-201ENST00000336180 MRPL47Q9HD33 250 aaKnown RBP13.29□□□□□ -0.28
LIMK1-201ENST00000336180 MLXIPLQ9NP71 852 aa13.29□□□□□ -0.28
LIMK1-201ENST00000336180 AVENQ9NQS1 362 aaPredicted RBP13.29□□□□□ -0.28
LIMK1-201ENST00000336180 GABRQQ9UN88 632 aa13.29□□□□□ -0.28
LIMK1-201ENST00000336180 PLXNA1Q9UIW2 1896 aa13.29□□□□□ -0.28
LIMK1-201ENST00000336180 A0A1B0GUA9 196 aa13.28□□□□□ -0.28
LIMK1-201ENST00000336180 E5RJQ4 531 aa13.28□□□□□ -0.28
LIMK1-201ENST00000336180 RARBP10826 455 aa13.28□□□□□ -0.28
LIMK1-201ENST00000336180 MCF2P10911 925 aa13.28□□□□□ -0.28
LIMK1-201ENST00000336180 CCDC130P13994 396 aa13.28□□□□□ -0.28
LIMK1-201ENST00000336180 PPP1R26Q5T8A7 1209 aaPredicted RBP13.28□□□□□ -0.28
LIMK1-201ENST00000336180 ARRDC4Q8NCT1 418 aa13.28□□□□□ -0.28
LIMK1-201ENST00000336180 CXorf38Q8TB03 319 aa13.28□□□□□ -0.28
LIMK1-201ENST00000336180 WNT8BQ93098 351 aa13.28□□□□□ -0.28
LIMK1-201ENST00000336180 TMEM121Q9BTD3 319 aa13.28□□□□□ -0.28
LIMK1-201ENST00000336180 FAM114A2Q9NRY5 505 aa13.28□□□□□ -0.28
LIMK1-201ENST00000336180 TSPAN16Q9UKR8 245 aa13.28□□□□□ -0.28
LIMK1-201ENST00000336180 ZNF148Q9UQR1 794 aa13.28□□□□□ -0.28
LIMK1-201ENST00000336180 SCN1AP35498 2009 aa13.28□□□□□ -0.28
LIMK1-201ENST00000336180 ZNF865P0CJ78 1059 aaPredicted RBP13.28□□□□□ -0.28
LIMK1-201ENST00000336180 TFE3P19532 575 aaPredicted RBP13.28□□□□□ -0.28
LIMK1-201ENST00000336180 GAD2Q05329 585 aa13.28□□□□□ -0.28
LIMK1-201ENST00000336180 GOLGA7BQ2TAP0 167 aa13.28□□□□□ -0.28
LIMK1-201ENST00000336180 ALS2CLQ60I27 953 aa13.28□□□□□ -0.28
LIMK1-201ENST00000336180 NPNTQ6UXI9 565 aa13.28□□□□□ -0.28
LIMK1-201ENST00000336180 C9orf72Q96LT7 481 aa13.28□□□□□ -0.28
LIMK1-201ENST00000336180 SH3GL2Q99962 352 aa13.28□□□□□ -0.28
LIMK1-201ENST00000336180 CALN1Q9BXU9 219 aa13.28□□□□□ -0.28
LIMK1-201ENST00000336180 DCLK3Q9C098 648 aa13.28□□□□□ -0.28
LIMK1-201ENST00000336180 ADAMTS10Q9H324 1103 aa13.28□□□□□ -0.28
LIMK1-201ENST00000336180 PPANQ9NQ55 473 aaKnown RBP13.28□□□□□ -0.28
LIMK1-201ENST00000336180 CTNNAL1Q9UBT7 734 aa13.28□□□□□ -0.28
LIMK1-201ENST00000336180 RASAL2Q9UJF2 1139 aa13.28□□□□□ -0.28
LIMK1-201ENST00000336180 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.28□□□□□ -0.28
LIMK1-201ENST00000336180 SPTLC1O15269 473 aa13.28□□□□□ -0.28
LIMK1-201ENST00000336180 ATP2C2O75185 946 aa13.28□□□□□ -0.28
LIMK1-201ENST00000336180 GPR32O75388 356 aa13.28□□□□□ -0.28
LIMK1-201ENST00000336180 ITGA8P53708 1063 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms