RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 SUGP1Q8IWZ8 645 aaKnown RBP18.66■□□□□ 0.58
LRCH3-201ENST00000334859 TMEM192Q8IY95 271 aa18.66■□□□□ 0.58
LRCH3-201ENST00000334859 CDT1Q9H211 546 aa18.66■□□□□ 0.58
LRCH3-201ENST00000334859 RPF1Q9H9Y2 349 aaKnown RBP18.66■□□□□ 0.58
LRCH3-201ENST00000334859 NKIRAS1Q9NYS0 192 aa18.66■□□□□ 0.58
LRCH3-201ENST00000334859 MCM3APO60318 1980 aa18.66■□□□□ 0.58
LRCH3-201ENST00000334859 A0A0G2JLL6 359 aaPredicted RBP18.66■□□□□ 0.58
LRCH3-201ENST00000334859 RASA4BC9J798 803 aa18.66■□□□□ 0.58
LRCH3-201ENST00000334859 SOCS7O14512 581 aa18.66■□□□□ 0.58
LRCH3-201ENST00000334859 RASA4O43374 803 aa18.66■□□□□ 0.58
LRCH3-201ENST00000334859 ABHD2P08910 425 aa18.66■□□□□ 0.58
LRCH3-201ENST00000334859 GHRP10912 638 aa18.66■□□□□ 0.58
LRCH3-201ENST00000334859 STX2P32856 288 aa18.66■□□□□ 0.58
LRCH3-201ENST00000334859 PTPN7P35236 360 aa18.66■□□□□ 0.58
LRCH3-201ENST00000334859 CDH8P55286 799 aa18.66■□□□□ 0.58
LRCH3-201ENST00000334859 PSMC1P62191 440 aaKnown RBP18.66■□□□□ 0.58
LRCH3-201ENST00000334859 KCTD2Q14681 263 aa18.66■□□□□ 0.58
LRCH3-201ENST00000334859 FASTKD3Q14CZ7 662 aaKnown RBP18.66■□□□□ 0.58
LRCH3-201ENST00000334859 OASLQ15646 514 aaKnown RBP18.66■□□□□ 0.58
LRCH3-201ENST00000334859 KCNT1Q5JUK3 1230 aa18.66■□□□□ 0.58
LRCH3-201ENST00000334859 EFCAB12Q6NXP0 572 aa18.66■□□□□ 0.58
LRCH3-201ENST00000334859 PRRT2Q7Z6L0 340 aaPredicted RBP18.66■□□□□ 0.58
LRCH3-201ENST00000334859 TMEM130Q8N3G9 435 aa18.66■□□□□ 0.58
LRCH3-201ENST00000334859 CLMNQ96JQ2 1002 aa18.66■□□□□ 0.58
LRCH3-201ENST00000334859 FGD4Q96M96 766 aa18.66■□□□□ 0.58
LRCH3-201ENST00000334859 FZD8Q9H461 694 aa18.66■□□□□ 0.58
LRCH3-201ENST00000334859 MINDY3Q9H8M7 445 aa18.66■□□□□ 0.58
LRCH3-201ENST00000334859 PTPRHQ9HD43 1115 aa18.66■□□□□ 0.58
LRCH3-201ENST00000334859 TXNRD2Q9NNW7 524 aa18.66■□□□□ 0.58
LRCH3-201ENST00000334859 SAE1Q9UBE0 346 aaPredicted RBP18.66■□□□□ 0.58
LRCH3-201ENST00000334859 MED7O43513 233 aa18.65■□□□□ 0.58
LRCH3-201ENST00000334859 SNX3O60493 162 aa18.65■□□□□ 0.58
LRCH3-201ENST00000334859 NFICP08651 508 aa18.65■□□□□ 0.58
LRCH3-201ENST00000334859 MNAT1P51948 309 aa18.65■□□□□ 0.58
LRCH3-201ENST00000334859 IGBP1P78318 339 aa18.65■□□□□ 0.58
LRCH3-201ENST00000334859 JOSD2Q8TAC2 188 aa18.65■□□□□ 0.58
LRCH3-201ENST00000334859 PPP1R16BQ96T49 567 aa18.65■□□□□ 0.58
LRCH3-201ENST00000334859 VPS37BQ9H9H4 285 aa18.65■□□□□ 0.58
LRCH3-201ENST00000334859 KLC4Q9NSK0 619 aa18.65■□□□□ 0.58
LRCH3-201ENST00000334859 CYTH4Q9UIA0 394 aa18.65■□□□□ 0.58
LRCH3-201ENST00000334859 MGAMO43451 1857 aa18.65■□□□□ 0.58
LRCH3-201ENST00000334859 ANK1P16157 1881 aa18.65■□□□□ 0.58
LRCH3-201ENST00000334859 RASSF9O75901 435 aa18.65■□□□□ 0.58
LRCH3-201ENST00000334859 SLC25A27O95847 323 aa18.65■□□□□ 0.58
LRCH3-201ENST00000334859 IREB2P48200 963 aaKnown RBP18.65■□□□□ 0.58
LRCH3-201ENST00000334859 MBTD1Q05BQ5 628 aa18.65■□□□□ 0.58
LRCH3-201ENST00000334859 MORF4L2Q15014 288 aa18.65■□□□□ 0.58
LRCH3-201ENST00000334859 TMEM63BQ5T3F8 832 aa18.65■□□□□ 0.58
LRCH3-201ENST00000334859 ARHGEF18Q6ZSZ5 1173 aa18.65■□□□□ 0.58
LRCH3-201ENST00000334859 TRPM8Q7Z2W7 1104 aa18.65■□□□□ 0.58
LRCH3-201ENST00000334859 POLNQ7Z5Q5 900 aa18.65■□□□□ 0.58
LRCH3-201ENST00000334859 ZBED8Q8IZ13 594 aa18.65■□□□□ 0.58
LRCH3-201ENST00000334859 EMC1Q8N766 993 aa18.65■□□□□ 0.58
LRCH3-201ENST00000334859 NKD2Q969F2 451 aaPredicted RBP18.65■□□□□ 0.58
LRCH3-201ENST00000334859 DCPSQ96C86 337 aaKnown RBP18.65■□□□□ 0.58
LRCH3-201ENST00000334859 TTC25Q96NG3 672 aa18.65■□□□□ 0.58
LRCH3-201ENST00000334859 TGS1Q96RS0 853 aaKnown RBP18.65■□□□□ 0.58
LRCH3-201ENST00000334859 MMP19Q99542 508 aa18.65■□□□□ 0.58
LRCH3-201ENST00000334859 DRG1Q9Y295 367 aaKnown RBP18.65■□□□□ 0.58
LRCH3-201ENST00000334859 POC1B-GALNT4F8VUJ3 575 aa18.64■□□□□ 0.57
LRCH3-201ENST00000334859 LRCH4O75427 683 aa18.64■□□□□ 0.57
LRCH3-201ENST00000334859 CSDE1O75534 798 aaKnown RBP18.64■□□□□ 0.57
LRCH3-201ENST00000334859 ITGAVP06756 1048 aa18.64■□□□□ 0.57
LRCH3-201ENST00000334859 TXNP10599 105 aaKnown RBP18.64■□□□□ 0.57
LRCH3-201ENST00000334859 SLC25A11Q02978 314 aaKnown RBP18.64■□□□□ 0.57
LRCH3-201ENST00000334859 FAM133BQ5BKY9 247 aaKnown RBP18.64■□□□□ 0.57
LRCH3-201ENST00000334859 CKAP2Q8WWK9 683 aa18.64■□□□□ 0.57
LRCH3-201ENST00000334859 SMARCAD1Q9H4L7 1026 aa18.64■□□□□ 0.57
LRCH3-201ENST00000334859 SMYD3Q9H7B4 428 aa18.64■□□□□ 0.57
LRCH3-201ENST00000334859 PCDH9Q9HC56 1237 aa18.64■□□□□ 0.57
LRCH3-201ENST00000334859 METTL5Q9NRN9 209 aaKnown RBP18.64■□□□□ 0.57
LRCH3-201ENST00000334859 ABCF3Q9NUQ8 709 aa18.64■□□□□ 0.57
LRCH3-201ENST00000334859 SIX4Q9UIU6 781 aa18.64■□□□□ 0.57
LRCH3-201ENST00000334859 USP15Q9Y4E8 981 aaPredicted RBP18.64■□□□□ 0.57
LRCH3-201ENST00000334859 GOLGA8MH3BSY2 632 aa18.63■□□□□ 0.57
LRCH3-201ENST00000334859 IL18RAPO95256 599 aa18.63■□□□□ 0.57
LRCH3-201ENST00000334859 R3HDM1Q15032 1099 aaKnown RBP18.63■□□□□ 0.57
LRCH3-201ENST00000334859 RIBC1Q8N443 379 aaPredicted RBP18.63■□□□□ 0.57
LRCH3-201ENST00000334859 CPXM1Q96SM3 734 aa18.63■□□□□ 0.57
LRCH3-201ENST00000334859 HMGXB4Q9UGU5 601 aa18.63■□□□□ 0.57
LRCH3-201ENST00000334859 SIGLEC16A6NMB1 481 aa18.63■□□□□ 0.57
LRCH3-201ENST00000334859 ITGB3P05106 788 aa18.63■□□□□ 0.57
LRCH3-201ENST00000334859 KRT7P08729 469 aa18.63■□□□□ 0.57
LRCH3-201ENST00000334859 IQCF3P0C7M6 154 aa18.63■□□□□ 0.57
LRCH3-201ENST00000334859 IL1R2P27930 398 aa18.63■□□□□ 0.57
LRCH3-201ENST00000334859 RAD23BP54727 409 aa18.63■□□□□ 0.57
LRCH3-201ENST00000334859 OTUD4Q01804 1114 aaKnown RBP18.63■□□□□ 0.57
LRCH3-201ENST00000334859 HADHQ16836 314 aaKnown RBP18.63■□□□□ 0.57
LRCH3-201ENST00000334859 RNASEH2BQ5TBB1 312 aaKnown RBP18.63■□□□□ 0.57
LRCH3-201ENST00000334859 C1orf127Q8N9H9 656 aa18.63■□□□□ 0.57
LRCH3-201ENST00000334859 ACTL9Q8TC94 416 aa18.63■□□□□ 0.57
LRCH3-201ENST00000334859 LHX5Q9H2C1 402 aa18.63■□□□□ 0.57
LRCH3-201ENST00000334859 C10orf88Q9H8K7 445 aa18.63■□□□□ 0.57
LRCH3-201ENST00000334859 EURLQ9NYK6 297 aa18.63■□□□□ 0.57
LRCH3-201ENST00000334859 GGT7Q9UJ14 662 aa18.63■□□□□ 0.57
LRCH3-201ENST00000334859 SHOC2Q9UQ13 582 aa18.63■□□□□ 0.57
LRCH3-201ENST00000334859 EVPLQ92817 2033 aa18.63■□□□□ 0.57
LRCH3-201ENST00000334859 C3orf70A6NLC5 250 aaPredicted RBP18.62■□□□□ 0.57
LRCH3-201ENST00000334859 HBP1O60381 514 aa18.62■□□□□ 0.57
LRCH3-201ENST00000334859 CST8O60676 142 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms