RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 TEX13BQ9BXU2 312 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 MTMR12Q9C0I1 747 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 TJP3O95049 919 aa12.97□□□□□ -0.33
VPS33B-201ENST00000333371 CD48P09326 243 aa12.97□□□□□ -0.33
VPS33B-201ENST00000333371 POTEJP0CG39 1038 aa12.97□□□□□ -0.33
VPS33B-201ENST00000333371 T-ENOLP0DO92 83 aa12.97□□□□□ -0.33
VPS33B-201ENST00000333371 CCND1P24385 295 aa12.97□□□□□ -0.33
VPS33B-201ENST00000333371 VCPP55072 806 aaKnown RBP12.97□□□□□ -0.33
VPS33B-201ENST00000333371 MYL6P60660 151 aa12.97□□□□□ -0.33
VPS33B-201ENST00000333371 MAPK6Q16659 721 aa12.97□□□□□ -0.33
VPS33B-201ENST00000333371 GPAT2Q6NUI2 795 aa12.97□□□□□ -0.33
VPS33B-201ENST00000333371 RPAINQ86UA6 219 aa12.97□□□□□ -0.33
VPS33B-201ENST00000333371 FBF1Q8TES7 1133 aa12.97□□□□□ -0.33
VPS33B-201ENST00000333371 RSRC1Q96IZ7 334 aaKnown RBP12.97□□□□□ -0.33
VPS33B-201ENST00000333371 LRRC37BQ96QE4 947 aa12.97□□□□□ -0.33
VPS33B-201ENST00000333371 ACAD9Q9H845 621 aa12.97□□□□□ -0.33
VPS33B-201ENST00000333371 NPHS2Q9NP85 383 aa12.97□□□□□ -0.33
VPS33B-201ENST00000333371 DCTN4Q9UJW0 460 aa12.97□□□□□ -0.33
VPS33B-201ENST00000333371 ZMYND8Q9ULU4 1186 aaPredicted RBP12.97□□□□□ -0.33
VPS33B-201ENST00000333371 PPP2R3BQ9Y5P8 575 aa12.97□□□□□ -0.33
VPS33B-201ENST00000333371 RLFQ13129 1914 aa12.97□□□□□ -0.33
VPS33B-201ENST00000333371 EDF1O60869 148 aaKnown RBP12.97□□□□□ -0.33
VPS33B-201ENST00000333371 CDKN2BP42772 138 aa12.97□□□□□ -0.33
VPS33B-201ENST00000333371 LACTBP83111 547 aaPredicted RBP12.97□□□□□ -0.33
VPS33B-201ENST00000333371 ACVR2BQ13705 512 aa12.97□□□□□ -0.33
VPS33B-201ENST00000333371 TMEM132BQ14DG7 1078 aa12.97□□□□□ -0.33
VPS33B-201ENST00000333371 PLEKHG4Q58EX7 1191 aa12.97□□□□□ -0.33
VPS33B-201ENST00000333371 TRIM72Q6ZMU5 477 aa12.97□□□□□ -0.33
VPS33B-201ENST00000333371 OTOAQ7RTW8 1153 aa12.97□□□□□ -0.33
VPS33B-201ENST00000333371 CDR2LQ86X02 465 aaPredicted RBP12.97□□□□□ -0.33
VPS33B-201ENST00000333371 GPC2Q8N158 579 aa12.97□□□□□ -0.33
VPS33B-201ENST00000333371 REPS2Q8NFH8 660 aa12.97□□□□□ -0.33
VPS33B-201ENST00000333371 LRRC8CQ8TDW0 803 aa12.97□□□□□ -0.33
VPS33B-201ENST00000333371 RBM41Q96IZ5 413 aaKnown RBP12.97□□□□□ -0.33
VPS33B-201ENST00000333371 CGRRF1Q99675 332 aa12.97□□□□□ -0.33
VPS33B-201ENST00000333371 ZNF214Q9UL59 606 aaPredicted RBP12.97□□□□□ -0.33
VPS33B-201ENST00000333371 STARD13Q9Y3M8 1113 aa12.97□□□□□ -0.33
VPS33B-201ENST00000333371 TCRBV5S1A1TA0A578 114 aa12.96□□□□□ -0.33
VPS33B-201ENST00000333371 TYROBPO43914 113 aa12.96□□□□□ -0.33
VPS33B-201ENST00000333371 UPP2O95045 317 aa12.96□□□□□ -0.33
VPS33B-201ENST00000333371 EPHB2P29323 1055 aa12.96□□□□□ -0.33
VPS33B-201ENST00000333371 PDK4Q16654 411 aa12.96□□□□□ -0.33
VPS33B-201ENST00000333371 HHATQ5VTY9 493 aa12.96□□□□□ -0.33
VPS33B-201ENST00000333371 CATSPERGQ6ZRH7 1159 aa12.96□□□□□ -0.33
VPS33B-201ENST00000333371 KIAA0319LQ8IZA0 1049 aa12.96□□□□□ -0.33
VPS33B-201ENST00000333371 EMC1Q8N766 993 aa12.96□□□□□ -0.33
VPS33B-201ENST00000333371 RDM1Q8NG50 284 aa12.96□□□□□ -0.33
VPS33B-201ENST00000333371 JOSD2Q8TAC2 188 aa12.96□□□□□ -0.33
VPS33B-201ENST00000333371 C10orf82Q8WW14 230 aa12.96□□□□□ -0.33
VPS33B-201ENST00000333371 VCPIP1Q96JH7 1222 aa12.96□□□□□ -0.33
VPS33B-201ENST00000333371 PLCD4Q9BRC7 762 aa12.96□□□□□ -0.33
VPS33B-201ENST00000333371 HOXC10Q9NYD6 342 aa12.96□□□□□ -0.33
VPS33B-201ENST00000333371 STYXL1Q9Y6J8 313 aa12.96□□□□□ -0.33
VPS33B-201ENST00000333371 LCTP09848 1927 aa12.96□□□□□ -0.34
VPS33B-201ENST00000333371 A0A0B4J269 797 aa12.96□□□□□ -0.34
VPS33B-201ENST00000333371 H0Y3Z8 333 aa12.96□□□□□ -0.34
VPS33B-201ENST00000333371 ALOX15BO15296 676 aa12.96□□□□□ -0.34
VPS33B-201ENST00000333371 PRPF4O43172 522 aaKnown RBP eCLIP12.96□□□□□ -0.34
VPS33B-201ENST00000333371 IL1R2P27930 398 aa12.96□□□□□ -0.34
VPS33B-201ENST00000333371 RFC1P35251 1148 aaPredicted RBP12.96□□□□□ -0.34
VPS33B-201ENST00000333371 ATP11AP98196 1134 aa12.96□□□□□ -0.34
VPS33B-201ENST00000333371 OTUD4Q01804 1114 aaKnown RBP12.96□□□□□ -0.34
VPS33B-201ENST00000333371 TAF5Q15542 800 aa12.96□□□□□ -0.34
VPS33B-201ENST00000333371 XKR3Q5GH77 459 aa12.96□□□□□ -0.34
VPS33B-201ENST00000333371 TFDP3Q5H9I0 405 aa12.96□□□□□ -0.34
VPS33B-201ENST00000333371 RHPN2Q8IUC4 686 aa12.96□□□□□ -0.34
VPS33B-201ENST00000333371 ARFGAP1Q8N6T3 406 aa12.96□□□□□ -0.34
VPS33B-201ENST00000333371 ACTL9Q8TC94 416 aa12.96□□□□□ -0.34
VPS33B-201ENST00000333371 CCHCR1Q8TD31 782 aa12.96□□□□□ -0.34
VPS33B-201ENST00000333371 SLC7A6OSQ96CW6 309 aaPredicted RBP12.96□□□□□ -0.34
VPS33B-201ENST00000333371 FAM167BQ9BTA0 163 aa12.96□□□□□ -0.34
VPS33B-201ENST00000333371 SLC17A7Q9P2U7 560 aa12.96□□□□□ -0.34
VPS33B-201ENST00000333371 USH1CQ9Y6N9 552 aa12.96□□□□□ -0.34
VPS33B-201ENST00000333371 MAFGO15525 162 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 SUPT20HL2P0C7V6 817 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 CETN2P41208 172 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 CTCFP49711 727 aaPredicted RBP12.95□□□□□ -0.34
VPS33B-201ENST00000333371 ZNF132P52740 706 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 RTP1P59025 263 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 OSTNP61366 133 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 MORF4L2Q15014 288 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 SETDB1Q15047 1291 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 CCDC142Q17RM4 750 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 ANKRD20A2Q5SQ80 823 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 ANKRD20A1Q5TYW2 823 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 ANKRD20A3Q5VUR7 823 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 BZW1Q7L1Q6 419 aaKnown RBP12.95□□□□□ -0.34
VPS33B-201ENST00000333371 RIBC1Q8N443 379 aaPredicted RBP12.95□□□□□ -0.34
VPS33B-201ENST00000333371 ZNF75CPQ92670 426 aaPredicted RBP12.95□□□□□ -0.34
VPS33B-201ENST00000333371 GRAMD1AQ96CP6 724 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 TCHPQ9BT92 498 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 PORCNQ9H237 461 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 UBN1Q9NPG3 1134 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 CISHQ9NSE2 258 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 RABGEF1Q9UJ41 708 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 NFASCO94856 1347 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 MAGEB2O15479 319 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 ATP2A2P16615 1042 aaKnown RBP12.95□□□□□ -0.34
VPS33B-201ENST00000333371 RAP1GAPP47736 663 aa12.95□□□□□ -0.34
VPS33B-201ENST00000333371 YARSP54577 528 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms