RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 ATG7O95352 703 aa16.18■□□□□ 0.18
BRCC3-201ENST00000330045 ASS1P00966 412 aaKnown RBP16.18■□□□□ 0.18
BRCC3-201ENST00000330045 ITGAVP06756 1048 aa16.18■□□□□ 0.18
BRCC3-201ENST00000330045 BRD2P25440 801 aaKnown RBP16.18■□□□□ 0.18
BRCC3-201ENST00000330045 CDKN2BP42772 138 aa16.18■□□□□ 0.18
BRCC3-201ENST00000330045 ZNF394Q53GI3 561 aa16.18■□□□□ 0.18
BRCC3-201ENST00000330045 ILDR2Q71H61 639 aa16.18■□□□□ 0.18
BRCC3-201ENST00000330045 C4orf33Q8N1A6 199 aa16.18■□□□□ 0.18
BRCC3-201ENST00000330045 DCPSQ96C86 337 aaKnown RBP16.18■□□□□ 0.18
BRCC3-201ENST00000330045 L3MBTL3Q96JM7 780 aaPredicted RBP16.18■□□□□ 0.18
BRCC3-201ENST00000330045 ACAD9Q9H845 621 aa16.18■□□□□ 0.18
BRCC3-201ENST00000330045 PCDH9Q9HC56 1237 aa16.18■□□□□ 0.18
BRCC3-201ENST00000330045 ADAMTS5Q9UNA0 930 aa16.18■□□□□ 0.18
BRCC3-201ENST00000330045 SHOC2Q9UQ13 582 aa16.18■□□□□ 0.18
BRCC3-201ENST00000330045 A8MUI8 341 aa16.18■□□□□ 0.18
BRCC3-201ENST00000330045 ANP32DO95626 131 aa16.18■□□□□ 0.18
BRCC3-201ENST00000330045 IFNB1P01574 187 aa16.18■□□□□ 0.18
BRCC3-201ENST00000330045 RPSAP08865 295 aaKnown RBP16.18■□□□□ 0.18
BRCC3-201ENST00000330045 CCND1P24385 295 aa16.18■□□□□ 0.18
BRCC3-201ENST00000330045 RPA3P35244 121 aaPredicted RBP16.18■□□□□ 0.18
BRCC3-201ENST00000330045 AP3M2P53677 418 aa16.18■□□□□ 0.18
BRCC3-201ENST00000330045 TAP1Q03518 808 aa16.18■□□□□ 0.18
BRCC3-201ENST00000330045 PDIA2Q13087 525 aaKnown RBP16.18■□□□□ 0.18
BRCC3-201ENST00000330045 SETDB1Q15047 1291 aa16.18■□□□□ 0.18
BRCC3-201ENST00000330045 RGS9BPQ6ZS82 235 aa16.18■□□□□ 0.18
BRCC3-201ENST00000330045 SULF1Q8IWU6 871 aa16.18■□□□□ 0.18
BRCC3-201ENST00000330045 SPOCK2Q92563 424 aa16.18■□□□□ 0.18
BRCC3-201ENST00000330045 THOC1Q96FV9 657 aaKnown RBP16.18■□□□□ 0.18
BRCC3-201ENST00000330045 PPCSQ9HAB8 311 aa16.18■□□□□ 0.18
BRCC3-201ENST00000330045 CA4P22748 312 aa16.17■□□□□ 0.18
BRCC3-201ENST00000330045 GBP2P32456 591 aaPredicted RBP16.17■□□□□ 0.18
BRCC3-201ENST00000330045 YARSP54577 528 aaKnown RBP16.17■□□□□ 0.18
BRCC3-201ENST00000330045 MYO1EQ12965 1108 aa16.17■□□□□ 0.18
BRCC3-201ENST00000330045 PDK4Q16654 411 aa16.17■□□□□ 0.18
BRCC3-201ENST00000330045 PPP1R15BQ5SWA1 713 aa16.17■□□□□ 0.18
BRCC3-201ENST00000330045 GPAT2Q6NUI2 795 aa16.17■□□□□ 0.18
BRCC3-201ENST00000330045 BRSK2Q8IWQ3 736 aa16.17■□□□□ 0.18
BRCC3-201ENST00000330045 MRRFQ96E11 262 aaKnown RBP16.17■□□□□ 0.18
BRCC3-201ENST00000330045 TEX13BQ9BXU2 312 aa16.17■□□□□ 0.18
BRCC3-201ENST00000330045 NIFKQ9BYG3 293 aaKnown RBP16.17■□□□□ 0.18
BRCC3-201ENST00000330045 ZNF518BQ9C0D4 1074 aa16.17■□□□□ 0.18
BRCC3-201ENST00000330045 MYLK2Q9H1R3 596 aa16.17■□□□□ 0.18
BRCC3-201ENST00000330045 R3HDMLQ9H3Y0 253 aa16.17■□□□□ 0.18
BRCC3-201ENST00000330045 ELP3Q9H9T3 547 aa16.17■□□□□ 0.18
BRCC3-201ENST00000330045 ETNK1Q9HBU6 452 aa16.17■□□□□ 0.18
BRCC3-201ENST00000330045 CISHQ9NSE2 258 aa16.17■□□□□ 0.18
BRCC3-201ENST00000330045 TXLNGQ9NUQ3 528 aa16.17■□□□□ 0.18
BRCC3-201ENST00000330045 SLC24A2Q9UI40 661 aa16.17■□□□□ 0.18
BRCC3-201ENST00000330045 GRID1Q9ULK0 1009 aa16.17■□□□□ 0.18
BRCC3-201ENST00000330045 USH1CQ9Y6N9 552 aa16.17■□□□□ 0.18
BRCC3-201ENST00000330045 LCTP09848 1927 aa16.17■□□□□ 0.18
BRCC3-201ENST00000330045 TNFSF9P41273 254 aa16.17■□□□□ 0.18
BRCC3-201ENST00000330045 LACTBP83111 547 aaPredicted RBP16.17■□□□□ 0.18
BRCC3-201ENST00000330045 ERICH1Q86X53 443 aa16.17■□□□□ 0.18
BRCC3-201ENST00000330045 WDR49Q8IV35 697 aa16.17■□□□□ 0.18
BRCC3-201ENST00000330045 WDTC1Q8N5D0 677 aa16.17■□□□□ 0.18
BRCC3-201ENST00000330045 LRRC8CQ8TDW0 803 aa16.17■□□□□ 0.18
BRCC3-201ENST00000330045 SLCO1B3Q9NPD5 702 aa16.17■□□□□ 0.18
BRCC3-201ENST00000330045 NOP53Q9NZM5 478 aaKnown RBP16.17■□□□□ 0.18
BRCC3-201ENST00000330045 PSMC3IPQ9P2W1 217 aaPredicted RBP16.17■□□□□ 0.18
BRCC3-201ENST00000330045 ADCY3O60266 1144 aa16.16■□□□□ 0.18
BRCC3-201ENST00000330045 MYL6P60660 151 aa16.16■□□□□ 0.18
BRCC3-201ENST00000330045 MOGSQ13724 837 aa16.16■□□□□ 0.18
BRCC3-201ENST00000330045 CAPSQ13938 189 aa16.16■□□□□ 0.18
BRCC3-201ENST00000330045 RASA2Q15283 850 aa16.16■□□□□ 0.18
BRCC3-201ENST00000330045 STXBP2Q15833 593 aa16.16■□□□□ 0.18
BRCC3-201ENST00000330045 CATSPERGQ6ZRH7 1159 aa16.16■□□□□ 0.18
BRCC3-201ENST00000330045 PCGF5Q86SE9 256 aa16.16■□□□□ 0.18
BRCC3-201ENST00000330045 VSIG1Q86XK7 387 aa16.16■□□□□ 0.18
BRCC3-201ENST00000330045 NIPA2Q8N8Q9 360 aa16.16■□□□□ 0.18
BRCC3-201ENST00000330045 SLC35B2Q8TB61 432 aa16.16■□□□□ 0.18
BRCC3-201ENST00000330045 NSMCE1Q8WV22 266 aa16.16■□□□□ 0.18
BRCC3-201ENST00000330045 MTMR12Q9C0I1 747 aa16.16■□□□□ 0.18
BRCC3-201ENST00000330045 C15orf41Q9Y2V0 281 aa16.16■□□□□ 0.18
BRCC3-201ENST00000330045 PPP2R3BQ9Y5P8 575 aa16.16■□□□□ 0.18
BRCC3-201ENST00000330045 OTOFQ9HC10 1997 aa16.16■□□□□ 0.18
BRCC3-201ENST00000330045 A0A1W2PPM1 405 aa16.16■□□□□ 0.18
BRCC3-201ENST00000330045 TTLL13PA6NNM8 815 aa16.16■□□□□ 0.18
BRCC3-201ENST00000330045 SPDYE16A6NNV3 312 aaPredicted RBP16.16■□□□□ 0.18
BRCC3-201ENST00000330045 GOLGA8SH3BPF8 625 aa16.16■□□□□ 0.18
BRCC3-201ENST00000330045 GOLGA8MH3BSY2 632 aa16.16■□□□□ 0.18
BRCC3-201ENST00000330045 EDF1O60869 148 aaKnown RBP16.16■□□□□ 0.18
BRCC3-201ENST00000330045 ATP5HO75947 161 aa16.16■□□□□ 0.18
BRCC3-201ENST00000330045 EIF4BP23588 611 aaKnown RBP16.16■□□□□ 0.18
BRCC3-201ENST00000330045 ATP11AP98196 1134 aa16.16■□□□□ 0.18
BRCC3-201ENST00000330045 SLC1A5Q15758 541 aa16.16■□□□□ 0.18
BRCC3-201ENST00000330045 HIF1AQ16665 826 aa16.16■□□□□ 0.18
BRCC3-201ENST00000330045 NOL9Q5SY16 702 aaKnown RBP16.16■□□□□ 0.18
BRCC3-201ENST00000330045 CYP4A22Q5TCH4 519 aa16.16■□□□□ 0.18
BRCC3-201ENST00000330045 ZBTB33Q86T24 672 aa16.16■□□□□ 0.18
BRCC3-201ENST00000330045 ANKMY2Q8IV38 441 aa16.16■□□□□ 0.18
BRCC3-201ENST00000330045 ERP27Q96DN0 273 aa16.16■□□□□ 0.18
BRCC3-201ENST00000330045 RSRC1Q96IZ7 334 aaKnown RBP16.16■□□□□ 0.18
BRCC3-201ENST00000330045 C12orf42Q96LP6 360 aa16.16■□□□□ 0.18
BRCC3-201ENST00000330045 LRRC37BQ96QE4 947 aa16.16■□□□□ 0.18
BRCC3-201ENST00000330045 RAB3IPQ96QF0 476 aaPredicted RBP16.16■□□□□ 0.18
BRCC3-201ENST00000330045 TCHPQ9BT92 498 aa16.16■□□□□ 0.18
BRCC3-201ENST00000330045 NIF3L1Q9GZT8 377 aa16.16■□□□□ 0.18
BRCC3-201ENST00000330045 IRF6O14896 467 aa16.15■□□□□ 0.18
BRCC3-201ENST00000330045 TYROBPO43914 113 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms