RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 C11orf21Q9P2W6 132 aa4.78□□□□□ -1.64
SKP1-201ENST00000328392 PCDHGB2Q9Y5G2 931 aa4.78□□□□□ -1.64
SKP1-201ENST00000328392 GAGE12BA1L429 117 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 GAGE12HA6NDE8 117 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 TMEM191CA6NGB0 347 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 DIRC3C9JPN6 131 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 F5H423 210 aaPredicted RBP4.77□□□□□ -1.65
SKP1-201ENST00000328392 OVOL3O00110 214 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 APOL1O14791 398 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 IL18RAPO95256 599 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 GPANK1O95872 356 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 HARSP12081 509 aaKnown RBP4.77□□□□□ -1.65
SKP1-201ENST00000328392 GCSHP23434 173 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 ZEB1P37275 1124 aaPredicted RBP4.77□□□□□ -1.65
SKP1-201ENST00000328392 ZNF844Q08AG5 666 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 CHAF1AQ13111 956 aaPredicted RBP4.77□□□□□ -1.65
SKP1-201ENST00000328392 STK3Q13188 491 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 RAB32Q13637 225 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 PMS2P11Q13670 270 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 DAG1Q14118 895 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 BOP1Q14137 746 aaKnown RBP4.77□□□□□ -1.65
SKP1-201ENST00000328392 PREPLQ4J6C6 727 aaPredicted RBP4.77□□□□□ -1.65
SKP1-201ENST00000328392 AMOTQ4VCS5 1084 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 SLC44A4Q53GD3 710 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 AGAP9Q5VTM2 703 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 FAM160B1Q5W0V3 765 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 HIBCHQ6NVY1 386 aaPredicted RBP4.77□□□□□ -1.65
SKP1-201ENST00000328392 GGT6Q6P531 493 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 FOXR2Q6PJQ5 311 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 ZDHHC24Q6UX98 284 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 UNC13DQ70J99 1090 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 RHOT2Q8IXI1 618 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 PSD4Q8NDX1 1056 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 BEND2Q8NDZ0 799 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 OR56A3Q8NH54 315 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 NUP133Q8WUM0 1156 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 RNF31Q96EP0 1072 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 LRIG1Q96JA1 1093 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 SGCZQ96LD1 299 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 SLC46A1Q96NT5 459 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 PNKPQ96T60 521 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 CNPPD1Q9BV87 410 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 AS3MTQ9HBK9 375 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 PLCB1Q9NQ66 1216 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 RLIMQ9NVW2 624 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 XPR1Q9UBH6 696 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 PLEKHM1Q9Y4G2 1056 aa4.77□□□□□ -1.65
SKP1-201ENST00000328392 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.76□□□□□ -1.65
SKP1-201ENST00000328392 TRIM43BA6NCK2 446 aa4.76□□□□□ -1.65
SKP1-201ENST00000328392 MARCH11A6NNE9 402 aa4.76□□□□□ -1.65
SKP1-201ENST00000328392 PYCARD-AS1I3L0S3 204 aa4.76□□□□□ -1.65
SKP1-201ENST00000328392 GCP02774 474 aa4.76□□□□□ -1.65
SKP1-201ENST00000328392 ANXA1P04083 346 aa4.76□□□□□ -1.65
SKP1-201ENST00000328392 SPATA31D3P0C874 917 aa4.76□□□□□ -1.65
SKP1-201ENST00000328392 TSHRP16473 764 aa4.76□□□□□ -1.65
SKP1-201ENST00000328392 DDX6P26196 483 aaKnown RBP eCLIP4.76□□□□□ -1.65
SKP1-201ENST00000328392 TM4SF4P48230 202 aa4.76□□□□□ -1.65
SKP1-201ENST00000328392 MXRA7P84157 204 aa4.76□□□□□ -1.65
SKP1-201ENST00000328392 OCA2Q04671 838 aa4.76□□□□□ -1.65
SKP1-201ENST00000328392 PIGFQ07326 219 aa4.76□□□□□ -1.65
SKP1-201ENST00000328392 RESTQ13127 1097 aa4.76□□□□□ -1.65
SKP1-201ENST00000328392 TP53BP2Q13625 1128 aa4.76□□□□□ -1.65
SKP1-201ENST00000328392 TRIM14Q14142 442 aa4.76□□□□□ -1.65
SKP1-201ENST00000328392 CD300EQ496F6 205 aaPredicted RBP4.76□□□□□ -1.65
SKP1-201ENST00000328392 TAF2Q6P1X5 1199 aa4.76□□□□□ -1.65
SKP1-201ENST00000328392 SPATA31D4Q6ZUB0 917 aa4.76□□□□□ -1.65
SKP1-201ENST00000328392 MICU3Q86XE3 530 aa4.76□□□□□ -1.65
SKP1-201ENST00000328392 ZNF280BQ86YH2 543 aa4.76□□□□□ -1.65
SKP1-201ENST00000328392 MAPKAPK5Q8IW41 473 aa4.76□□□□□ -1.65
SKP1-201ENST00000328392 ARHGEF19Q8IW93 802 aa4.76□□□□□ -1.65
SKP1-201ENST00000328392 TXLNBQ8N3L3 684 aa4.76□□□□□ -1.65
SKP1-201ENST00000328392 TMEM125Q96AQ2 219 aa4.76□□□□□ -1.65
SKP1-201ENST00000328392 TRIM43Q96BQ3 446 aaPredicted RBP4.76□□□□□ -1.65
SKP1-201ENST00000328392 LRRC46Q96FV0 321 aa4.76□□□□□ -1.65
SKP1-201ENST00000328392 UNKQ9C0B0 810 aaKnown RBP4.76□□□□□ -1.65
SKP1-201ENST00000328392 ZNF518BQ9C0D4 1074 aa4.76□□□□□ -1.65
SKP1-201ENST00000328392 RNPEPQ9H4A4 650 aa4.76□□□□□ -1.65
SKP1-201ENST00000328392 FAM30AQ9NZY2 134 aa4.76□□□□□ -1.65
SKP1-201ENST00000328392 CEP83Q9Y592 693 aa4.76□□□□□ -1.65
SKP1-201ENST00000328392 FPGT-TNNI3KV9GXZ4 949 aa4.76□□□□□ -1.65
SKP1-201ENST00000328392 hCG_1984214I3L0E3 225 aa4.75□□□□□ -1.65
SKP1-201ENST00000328392 RAB27BO00194 218 aa4.75□□□□□ -1.65
SKP1-201ENST00000328392 SPDEFO95238 335 aa4.75□□□□□ -1.65
SKP1-201ENST00000328392 CHEK2O96017 543 aa4.75□□□□□ -1.65
SKP1-201ENST00000328392 CFIP05156 583 aa4.75□□□□□ -1.65
SKP1-201ENST00000328392 SETSIPP0DME0 302 aa4.75□□□□□ -1.65
SKP1-201ENST00000328392 YY1P25490 414 aa4.75□□□□□ -1.65
SKP1-201ENST00000328392 BMPR1AP36894 532 aa4.75□□□□□ -1.65
SKP1-201ENST00000328392 TRAPPC10P48553 1259 aa4.75□□□□□ -1.65
SKP1-201ENST00000328392 LILRA4P59901 499 aa4.75□□□□□ -1.65
SKP1-201ENST00000328392 POU6F2P78424 691 aaPredicted RBP4.75□□□□□ -1.65
SKP1-201ENST00000328392 KRT17Q04695 432 aa4.75□□□□□ -1.65
SKP1-201ENST00000328392 LONRF3Q496Y0 759 aa4.75□□□□□ -1.65
SKP1-201ENST00000328392 B3GNTL1Q67FW5 361 aaPredicted RBP4.75□□□□□ -1.65
SKP1-201ENST00000328392 LAYNQ6UX15 382 aa4.75□□□□□ -1.65
SKP1-201ENST00000328392 Q6YL49 198 aa4.75□□□□□ -1.65
SKP1-201ENST00000328392 RNF44Q7L0R7 432 aa4.75□□□□□ -1.65
SKP1-201ENST00000328392 EXOC8Q8IYI6 725 aa4.75□□□□□ -1.65
SKP1-201ENST00000328392 MORC4Q8TE76 937 aa4.75□□□□□ -1.65
SKP1-201ENST00000328392 POF1BQ8WVV4 589 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms