RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 ACSS3Q9H6R3 686 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 C17orf75Q9HAS0 396 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 S100A14Q9HCY8 104 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 HSPBP1Q9NZL4 362 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 NDUFA13Q9P0J0 144 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 TAGLN3Q9UI15 199 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 ZNF148Q9UQR1 794 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 ZNF536O15090 1300 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 K7ENM7 598 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 VILLO15195 856 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 LPXNO60711 386 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 PFDN1O60925 122 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 ATP6V1G1O75348 118 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 SMIM18P0DKX4 95 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 KRT10P13645 584 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 DESP17661 470 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 SHMT1P34896 483 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 RGS2P41220 211 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 DLG1Q12959 904 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 PICALMQ13492 652 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 DDB1Q16531 1140 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 DNAL1Q4LDG9 190 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 MSS51Q4VC12 460 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 XXYLT1Q8NBI6 393 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 AGBL1Q96MI9 1066 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 FAM111AQ96PZ2 611 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 MYPNQ86TC9 1320 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 hCG_2014768A0A024R1R8 64 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 A0A0J9YVX5 310 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 SPECC1L-ADORA2AF8WAN1 911 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 GOLGA8SH3BPF8 625 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 GOLGA8MH3BSY2 632 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 ATP2A1O14983 1001 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 PSMD10O75832 226 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 FOSP01100 380 aaPredicted RBP13.4□□□□□ -0.26
CCDC60-201ENST00000327554 TAL1P17542 331 aaPredicted RBP13.4□□□□□ -0.26
CCDC60-201ENST00000327554 VCLP18206 1134 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 GJC1P36383 396 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 AQP4P55087 323 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 SNAP25P60880 206 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 KDSRQ06136 332 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 HIF1AQ16665 826 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 LRRC36Q1X8D7 754 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 TMEM259Q4ZIN3 620 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 LPCAT4Q643R3 524 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 UGT2A3Q6UWM9 527 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 CPA5Q8WXQ8 436 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 TTC17Q96AE7 1141 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 DGCR14Q96DF8 476 aaKnown RBP13.4□□□□□ -0.26
CCDC60-201ENST00000327554 WDR18Q9BV38 432 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 KLHL11Q9NVR0 708 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 KCNK4Q9NYG8 393 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 KCND2Q9NZV8 630 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 PPARGC1AQ9UBK2 798 aaKnown RBP13.4□□□□□ -0.26
CCDC60-201ENST00000327554 CHMP2BQ9UQN3 213 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 A0A088AWK7 358 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 BTBD19C9JJ37 291 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 AP1G1O43747 822 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 CYP3A4P08684 503 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 GYS1P13807 737 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 STIP1P31948 543 aaKnown RBP13.4□□□□□ -0.26
CCDC60-201ENST00000327554 NFX1Q12986 1120 aaKnown RBP13.4□□□□□ -0.26
CCDC60-201ENST00000327554 SH2D5Q6ZV89 423 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 ATP11CQ8NB49 1132 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 GSTCDQ8NEC7 633 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 APOPT1Q96IL0 206 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 SERAC1Q96JX3 654 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 PRICKLE1Q96MT3 831 aaPredicted RBP13.4□□□□□ -0.26
CCDC60-201ENST00000327554 ADAMTS6Q9UKP5 1117 aa13.4□□□□□ -0.26
CCDC60-201ENST00000327554 FARP1Q9Y4F1 1045 aaPredicted RBP13.4□□□□□ -0.26
CCDC60-201ENST00000327554 PI4K2BG5E9Z4 385 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 KLF11O14901 512 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 RAD21O60216 631 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 PGM3O95394 542 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 HOXA13P31271 388 aaPredicted RBP13.39□□□□□ -0.27
CCDC60-201ENST00000327554 PHBP35232 272 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 ZNF76P36508 570 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 CPOXP36551 454 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 PDE1BQ01064 536 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 TBL3Q12788 808 aaKnown RBP13.39□□□□□ -0.27
CCDC60-201ENST00000327554 SFSWAPQ12872 951 aaKnown RBP13.39□□□□□ -0.27
CCDC60-201ENST00000327554 NFIXQ14938 502 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 PDK3Q15120 406 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 OASLQ15646 514 aaKnown RBP13.39□□□□□ -0.27
CCDC60-201ENST00000327554 KLHL38Q2WGJ6 581 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 FNBP1LQ5T0N5 605 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 C1QTNF12Q5T7M4 302 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 OLFML2BQ68BL8 750 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 PYDC1Q8WXC3 89 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 NACC1Q96RE7 527 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 CCDC106Q9BWC9 280 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 USP29Q9HBJ7 922 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 COQ4Q9Y3A0 265 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 NRAPQ86VF7 1730 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 C6orf229H3BNL8 230 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 GPC3P51654 580 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 CHN2P52757 468 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 MCCD1P59942 119 aaPredicted RBP13.39□□□□□ -0.27
CCDC60-201ENST00000327554 XIAPP98170 497 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 SLC18A2Q05940 514 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms