RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 ADCY6O43306 1168 aa11.23□□□□□ -0.61
CUL4A-201ENST00000326335 PDGFRAP16234 1089 aa11.23□□□□□ -0.61
CUL4A-201ENST00000326335 TBXAS1P24557 533 aaPredicted RBP11.23□□□□□ -0.61
CUL4A-201ENST00000326335 SSTR1P30872 391 aa11.23□□□□□ -0.61
CUL4A-201ENST00000326335 CENPCQ03188 943 aa11.23□□□□□ -0.61
CUL4A-201ENST00000326335 TMEM132DQ14C87 1099 aa11.23□□□□□ -0.61
CUL4A-201ENST00000326335 SIX1Q15475 284 aaPredicted RBP11.23□□□□□ -0.61
CUL4A-201ENST00000326335 TARBP2Q15633 366 aaKnown RBP11.23□□□□□ -0.61
CUL4A-201ENST00000326335 CTAGE3PQ8IX95 158 aa11.23□□□□□ -0.61
CUL4A-201ENST00000326335 TCP11Q8WWU5 503 aa11.23□□□□□ -0.61
CUL4A-201ENST00000326335 PGLYRP2Q96PD5 576 aa11.23□□□□□ -0.61
CUL4A-201ENST00000326335 MAK16Q9BXY0 300 aaKnown RBP11.23□□□□□ -0.61
CUL4A-201ENST00000326335 DPEP3Q9H4B8 488 aa11.23□□□□□ -0.61
CUL4A-201ENST00000326335 TMPRSS4Q9NRS4 437 aa11.23□□□□□ -0.61
CUL4A-201ENST00000326335 FGFR1OP2Q9NVK5 253 aa11.23□□□□□ -0.61
CUL4A-201ENST00000326335 SEPT10Q9P0V9 454 aa11.23□□□□□ -0.61
CUL4A-201ENST00000326335 EXOC1LA0A1B0GW35 172 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 GMNCA6NCL1 334 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 I3L4J1 428 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 ACKR2O00590 384 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 PODXLO00592 558 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 CCDC130P13994 396 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 BRAFP15056 766 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 ANXA13P27216 316 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 ZC3H12AQ5D1E8 599 aaKnown RBP11.22□□□□□ -0.61
CUL4A-201ENST00000326335 PPP1R21Q6ZMI0 780 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 C15orf39Q6ZRI6 1047 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 LRRC34Q8IZ02 419 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 SNF8Q96H20 258 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 EPN3Q9H201 632 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 RNF39Q9H2S5 420 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 GINM1Q9NU53 330 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 CPSF3Q9UKF6 684 aaKnown RBP11.22□□□□□ -0.61
CUL4A-201ENST00000326335 TMEM120BA0PK00 339 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 FAM187AA6NFU0 413 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 TCP11X1B4DZS4 312 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 HBP1O60381 514 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 RNF8O76064 485 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 CETPP11597 493 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 PECAM1P16284 738 aaPredicted RBP11.22□□□□□ -0.61
CUL4A-201ENST00000326335 TFE3P19532 575 aaPredicted RBP11.22□□□□□ -0.61
CUL4A-201ENST00000326335 SLC10A6Q3KNW5 377 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 KDM7AQ6ZMT4 941 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 ATL2Q8NHH9 583 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 HVCN1Q96D96 273 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 ZFP42Q96MM3 310 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 ACAP3Q96P50 834 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 NIFKQ9BYG3 293 aaKnown RBP11.22□□□□□ -0.61
CUL4A-201ENST00000326335 EPB41L4BQ9H329 900 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 RRAGCQ9HB90 399 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 IFT122Q9HBG6 1241 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 MICAL2O94851 1124 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 MMP8P22894 467 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 ASPAP45381 313 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 MBTD1Q05BQ5 628 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 KRT81Q14533 505 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 GRIK4Q16099 956 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 CCDC121Q6ZUS5 278 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 ENOSF1Q7L5Y1 443 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 WDR49Q8IV35 697 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 ARFGAP2Q8N6H7 521 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 TSPAN16Q9UKR8 245 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 CDH23Q9H251 3354 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 PHIPQ8WWQ0 1821 aa11.22□□□□□ -0.61
CUL4A-201ENST00000326335 SMPD1P17405 629 aa11.21□□□□□ -0.61
CUL4A-201ENST00000326335 DARS2Q6PI48 645 aaKnown RBP11.21□□□□□ -0.61
CUL4A-201ENST00000326335 UPF1Q92900 1129 aaKnown RBP eCLIP11.21□□□□□ -0.61
CUL4A-201ENST00000326335 FAM167AQ96KS9 214 aa11.21□□□□□ -0.61
CUL4A-201ENST00000326335 MRPL45Q9BRJ2 306 aaKnown RBP11.21□□□□□ -0.61
CUL4A-201ENST00000326335 DPP3Q9NY33 737 aa11.21□□□□□ -0.61
CUL4A-201ENST00000326335 CHMP2BQ9UQN3 213 aa11.21□□□□□ -0.61
CUL4A-201ENST00000326335 NEU2Q9Y3R4 380 aa11.21□□□□□ -0.61
CUL4A-201ENST00000326335 MEIS3P2A8K0S8 358 aa11.21□□□□□ -0.61
CUL4A-201ENST00000326335 A8MXQ7 604 aa11.21□□□□□ -0.61
CUL4A-201ENST00000326335 RASA4BC9J798 803 aa11.21□□□□□ -0.61
CUL4A-201ENST00000326335 CLDN5O00501 218 aa11.21□□□□□ -0.61
CUL4A-201ENST00000326335 RASA4O43374 803 aa11.21□□□□□ -0.61
CUL4A-201ENST00000326335 ATG7O95352 703 aa11.21□□□□□ -0.61
CUL4A-201ENST00000326335 PTPN11Q06124 597 aaPredicted RBP11.21□□□□□ -0.61
CUL4A-201ENST00000326335 ANKRD22Q5VYY1 191 aa11.21□□□□□ -0.61
CUL4A-201ENST00000326335 SPOCD1Q6ZMY3 1216 aa11.21□□□□□ -0.61
CUL4A-201ENST00000326335 FASTKD5Q7L8L6 764 aaKnown RBP11.21□□□□□ -0.61
CUL4A-201ENST00000326335 PLCD3Q8N3E9 789 aa11.21□□□□□ -0.61
CUL4A-201ENST00000326335 BRI3BPQ8WY22 251 aa11.21□□□□□ -0.61
CUL4A-201ENST00000326335 CFAP36Q96G28 342 aa11.21□□□□□ -0.61
CUL4A-201ENST00000326335 IP6K2Q9UHH9 426 aa11.21□□□□□ -0.61
CUL4A-201ENST00000326335 RANBP2P49792 3224 aaKnown RBP11.21□□□□□ -0.62
CUL4A-201ENST00000326335 TCRBV7S3A2A0A539 114 aa11.21□□□□□ -0.62
CUL4A-201ENST00000326335 ATP2A1O14983 1001 aa11.21□□□□□ -0.62
CUL4A-201ENST00000326335 CYP1A1P04798 512 aaPredicted RBP11.21□□□□□ -0.62
CUL4A-201ENST00000326335 MIPP30301 263 aa11.21□□□□□ -0.62
CUL4A-201ENST00000326335 ARHGAP1Q07960 439 aa11.21□□□□□ -0.62
CUL4A-201ENST00000326335 GOLGA7BQ2TAP0 167 aa11.21□□□□□ -0.62
CUL4A-201ENST00000326335 TWF2Q6IBS0 349 aaKnown RBP11.21□□□□□ -0.62
CUL4A-201ENST00000326335 SPATA18Q8TC71 538 aa11.21□□□□□ -0.62
CUL4A-201ENST00000326335 AAASQ9NRG9 546 aa11.21□□□□□ -0.62
CUL4A-201ENST00000326335 INPP5FQ9Y2H2 1132 aa11.21□□□□□ -0.62
CUL4A-201ENST00000326335 SCINQ9Y6U3 715 aa11.21□□□□□ -0.62
CUL4A-201ENST00000326335 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.2□□□□□ -0.62
CUL4A-201ENST00000326335 PPFIA2O75334 1257 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms